Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2866:2867
Extra
PDB:
ATOM 1 O3' C A 865 -39.359 -10.939 134.324 1.00110.33 O
ATOM 2 P A A 866 -38.671 -12.108 133.454 1.00106.61 P
ATOM 3 OP1 A A 866 -37.976 -13.011 134.405 1.00108.31 O
ATOM 4 OP2 A A 866 -37.871 -11.440 132.392 1.00104.95 O
ATOM 5 O5' A A 866 -39.938 -12.858 132.807 1.00106.60 O
ATOM 6 C5' A A 866 -41.052 -13.244 133.613 1.00107.82 C
ATOM 7 C4' A A 866 -42.265 -13.637 132.785 1.00107.38 C
ATOM 8 O4' A A 866 -42.753 -12.501 132.022 1.00105.73 O
ATOM 9 C3' A A 866 -42.050 -14.719 131.738 1.00107.17 C
ATOM 10 O3' A A 866 -42.048 -16.020 132.284 1.00108.82 O
ATOM 11 C2' A A 866 -43.192 -14.471 130.762 1.00106.10 C
ATOM 12 O2' A A 866 -44.409 -14.992 131.277 1.00107.18 O
ATOM 13 C1' A A 866 -43.271 -12.943 130.777 1.00104.89 C
ATOM 14 N9 A A 866 -42.466 -12.330 129.697 1.00103.25 N
ATOM 15 C8 A A 866 -41.277 -11.663 129.867 1.00102.78 C
ATOM 16 N7 A A 866 -40.752 -11.187 128.764 1.00101.30 N
ATOM 17 C5 A A 866 -41.653 -11.561 127.776 1.00100.73 C
ATOM 18 C6 A A 866 -41.661 -11.350 126.376 1.00 99.27 C
ATOM 19 N6 A A 866 -40.708 -10.701 125.714 1.00 98.09 N
ATOM 20 N1 A A 866 -42.700 -11.847 125.669 1.00 99.11 N
ATOM 21 C2 A A 866 -43.661 -12.500 126.346 1.00100.35 C
ATOM 22 N3 A A 866 -43.767 -12.765 127.655 1.00101.78 N
ATOM 23 C4 A A 866 -42.717 -12.266 128.337 1.00101.91 C
ATOM 24 P G A 867 -41.240 -17.193 131.551 1.00104.92 P
ATOM 25 OP1 G A 867 -41.126 -18.316 132.514 1.00106.89 O
ATOM 26 OP2 G A 867 -39.996 -16.598 131.005 1.00103.77 O
ATOM 27 O5' G A 867 -42.218 -17.591 130.358 1.00104.14 O
TER
ATOM 1 O3' A B 866 -42.048 -16.020 132.284 1.00108.82 O
ATOM 2 P G B 867 -41.240 -17.193 131.551 1.00104.92 P
ATOM 3 OP1 G B 867 -41.126 -18.316 132.514 1.00106.89 O
ATOM 4 OP2 G B 867 -39.996 -16.598 131.005 1.00103.77 O
ATOM 5 O5' G B 867 -42.218 -17.591 130.358 1.00104.14 O
ATOM 6 C5' G B 867 -43.556 -17.985 130.618 1.00104.88 C
ATOM 7 C4' G B 867 -44.365 -18.091 129.349 1.00103.81 C
ATOM 8 O4' G B 867 -44.423 -16.803 128.692 1.00102.07 O
ATOM 9 C3' G B 867 -43.833 -19.047 128.286 1.00103.56 C
ATOM 10 O3' G B 867 -44.221 -20.396 128.521 1.00105.04 O
ATOM 11 C2' G B 867 -44.397 -18.465 126.991 1.00101.89 C
ATOM 12 O2' G B 867 -45.748 -18.870 126.794 1.00102.24 O
ATOM 13 C1' G B 867 -44.375 -16.966 127.292 1.00100.87 C
ATOM 14 N9 G B 867 -43.149 -16.313 126.810 1.00 99.73 N
ATOM 15 C8 G B 867 -42.054 -16.083 127.602 1.00100.17 C
ATOM 16 N7 G B 867 -41.083 -15.456 126.996 1.00 98.99 N
ATOM 17 C5 G B 867 -41.582 -15.253 125.724 1.00 97.69 C
ATOM 18 C6 G B 867 -40.957 -14.619 124.641 1.00 96.15 C
ATOM 19 O6 G B 867 -39.822 -14.128 124.640 1.00 95.67 O
ATOM 20 N1 G B 867 -41.792 -14.605 123.522 1.00 95.23 N
ATOM 21 C2 G B 867 -43.060 -15.144 123.474 1.00 95.75 C
ATOM 22 N2 G B 867 -43.722 -15.042 122.319 1.00 94.76 N
ATOM 23 N3 G B 867 -43.651 -15.746 124.490 1.00 97.20 N
ATOM 24 C4 G B 867 -42.857 -15.763 125.582 1.00 98.11 C
ATOM 25 P U B 868 -43.174 -21.449 129.136 1.00109.35 P
ATOM 26 OP1 U B 868 -43.956 -22.463 129.886 1.00111.12 O
ATOM 27 OP2 U B 868 -42.137 -20.668 129.860 1.00109.25 O
ATOM 28 O5' U B 868 -42.547 -22.109 127.830 1.00108.65 O
TER
ATOM 2 P A A 866 -38.671 -12.108 133.454 1.00106.61 P
ATOM 3 OP1 A A 866 -37.976 -13.011 134.405 1.00108.31 O
ATOM 4 OP2 A A 866 -37.871 -11.440 132.392 1.00104.95 O
ATOM 5 O5' A A 866 -39.938 -12.858 132.807 1.00106.60 O
ATOM 6 C5' A A 866 -41.052 -13.244 133.613 1.00107.82 C
ATOM 7 C4' A A 866 -42.265 -13.637 132.785 1.00107.38 C
ATOM 8 O4' A A 866 -42.753 -12.501 132.022 1.00105.73 O
ATOM 9 C3' A A 866 -42.050 -14.719 131.738 1.00107.17 C
ATOM 10 O3' A A 866 -42.048 -16.020 132.284 1.00108.82 O
ATOM 11 C2' A A 866 -43.192 -14.471 130.762 1.00106.10 C
ATOM 12 O2' A A 866 -44.409 -14.992 131.277 1.00107.18 O
ATOM 13 C1' A A 866 -43.271 -12.943 130.777 1.00104.89 C
ATOM 14 N9 A A 866 -42.466 -12.330 129.697 1.00103.25 N
ATOM 15 C8 A A 866 -41.277 -11.663 129.867 1.00102.78 C
ATOM 16 N7 A A 866 -40.752 -11.187 128.764 1.00101.30 N
ATOM 17 C5 A A 866 -41.653 -11.561 127.776 1.00100.73 C
ATOM 18 C6 A A 866 -41.661 -11.350 126.376 1.00 99.27 C
ATOM 19 N6 A A 866 -40.708 -10.701 125.714 1.00 98.09 N
ATOM 20 N1 A A 866 -42.700 -11.847 125.669 1.00 99.11 N
ATOM 21 C2 A A 866 -43.661 -12.500 126.346 1.00100.35 C
ATOM 22 N3 A A 866 -43.767 -12.765 127.655 1.00101.78 N
ATOM 23 C4 A A 866 -42.717 -12.266 128.337 1.00101.91 C
ATOM 24 P G A 867 -41.240 -17.193 131.551 1.00104.92 P
ATOM 25 OP1 G A 867 -41.126 -18.316 132.514 1.00106.89 O
ATOM 26 OP2 G A 867 -39.996 -16.598 131.005 1.00103.77 O
ATOM 27 O5' G A 867 -42.218 -17.591 130.358 1.00104.14 O
TER
ATOM 1 O3' A B 866 -42.048 -16.020 132.284 1.00108.82 O
ATOM 2 P G B 867 -41.240 -17.193 131.551 1.00104.92 P
ATOM 3 OP1 G B 867 -41.126 -18.316 132.514 1.00106.89 O
ATOM 4 OP2 G B 867 -39.996 -16.598 131.005 1.00103.77 O
ATOM 5 O5' G B 867 -42.218 -17.591 130.358 1.00104.14 O
ATOM 6 C5' G B 867 -43.556 -17.985 130.618 1.00104.88 C
ATOM 7 C4' G B 867 -44.365 -18.091 129.349 1.00103.81 C
ATOM 8 O4' G B 867 -44.423 -16.803 128.692 1.00102.07 O
ATOM 9 C3' G B 867 -43.833 -19.047 128.286 1.00103.56 C
ATOM 10 O3' G B 867 -44.221 -20.396 128.521 1.00105.04 O
ATOM 11 C2' G B 867 -44.397 -18.465 126.991 1.00101.89 C
ATOM 12 O2' G B 867 -45.748 -18.870 126.794 1.00102.24 O
ATOM 13 C1' G B 867 -44.375 -16.966 127.292 1.00100.87 C
ATOM 14 N9 G B 867 -43.149 -16.313 126.810 1.00 99.73 N
ATOM 15 C8 G B 867 -42.054 -16.083 127.602 1.00100.17 C
ATOM 16 N7 G B 867 -41.083 -15.456 126.996 1.00 98.99 N
ATOM 17 C5 G B 867 -41.582 -15.253 125.724 1.00 97.69 C
ATOM 18 C6 G B 867 -40.957 -14.619 124.641 1.00 96.15 C
ATOM 19 O6 G B 867 -39.822 -14.128 124.640 1.00 95.67 O
ATOM 20 N1 G B 867 -41.792 -14.605 123.522 1.00 95.23 N
ATOM 21 C2 G B 867 -43.060 -15.144 123.474 1.00 95.75 C
ATOM 22 N2 G B 867 -43.722 -15.042 122.319 1.00 94.76 N
ATOM 23 N3 G B 867 -43.651 -15.746 124.490 1.00 97.20 N
ATOM 24 C4 G B 867 -42.857 -15.763 125.582 1.00 98.11 C
ATOM 25 P U B 868 -43.174 -21.449 129.136 1.00109.35 P
ATOM 26 OP1 U B 868 -43.956 -22.463 129.886 1.00111.12 O
ATOM 27 OP2 U B 868 -42.137 -20.668 129.860 1.00109.25 O
ATOM 28 O5' U B 868 -42.547 -22.109 127.830 1.00108.65 O
TER
Atoms:
OP1: (-37.976,-13.011,134.405)
OP2: (-37.871,-11.440,132.392)
C3': (-42.050,-14.719,131.738)
C1': (-43.271,-12.943,130.777)
C5': (-41.052,-13.244,133.613)
O4': (-42.753,-12.501,132.022)
C8: (-41.277,-11.663,129.867)
O2': (-44.409,-14.992,131.277)
C6: (-41.661,-11.350,126.376)
C5: (-41.653,-11.561,127.776)
C4: (-42.717,-12.266,128.337)
P: (-38.671,-12.108,133.454)
C4': (-42.265,-13.637,132.785)
C2': (-43.192,-14.471,130.762)
C2: (-43.661,-12.500,126.346)
N1: (-42.700,-11.847,125.669)
N3: (-43.767,-12.765,127.655)
N6: (-40.708,-10.701,125.714)
N7: (-40.752,-11.187,128.764)
N9: (-42.466,-12.330,129.697)
O5': (-39.938,-12.858,132.807)
O3': (-42.048,-16.020,132.284)
OP2: (-37.871,-11.440,132.392)
C3': (-42.050,-14.719,131.738)
C1': (-43.271,-12.943,130.777)
C5': (-41.052,-13.244,133.613)
O4': (-42.753,-12.501,132.022)
C8: (-41.277,-11.663,129.867)
O2': (-44.409,-14.992,131.277)
C6: (-41.661,-11.350,126.376)
C5: (-41.653,-11.561,127.776)
C4: (-42.717,-12.266,128.337)
P: (-38.671,-12.108,133.454)
C4': (-42.265,-13.637,132.785)
C2': (-43.192,-14.471,130.762)
C2: (-43.661,-12.500,126.346)
N1: (-42.700,-11.847,125.669)
N3: (-43.767,-12.765,127.655)
N6: (-40.708,-10.701,125.714)
N7: (-40.752,-11.187,128.764)
N9: (-42.466,-12.330,129.697)
O5': (-39.938,-12.858,132.807)
O3': (-42.048,-16.020,132.284)
OP1: (-41.126,-18.316,132.514)
OP2: (-39.996,-16.598,131.005)
C3': (-43.833,-19.047,128.286)
C1': (-44.375,-16.966,127.292)
C5': (-43.556,-17.985,130.618)
O6: (-39.822,-14.128,124.640)
O4': (-44.423,-16.803,128.692)
C8: (-42.054,-16.083,127.602)
C2: (-43.060,-15.144,123.474)
C6: (-40.957,-14.619,124.641)
C5: (-41.582,-15.253,125.724)
C4: (-42.857,-15.763,125.582)
P: (-41.240,-17.193,131.551)
C4': (-44.365,-18.091,129.349)
C2': (-44.397,-18.465,126.991)
O2': (-45.748,-18.870,126.794)
N1: (-41.792,-14.605,123.522)
N2: (-43.722,-15.042,122.319)
N3: (-43.651,-15.746,124.490)
N7: (-41.083,-15.456,126.996)
N9: (-43.149,-16.313,126.810)
O5': (-42.218,-17.591,130.358)
O3': (-44.221,-20.396,128.521)
OP2: (-39.996,-16.598,131.005)
C3': (-43.833,-19.047,128.286)
C1': (-44.375,-16.966,127.292)
C5': (-43.556,-17.985,130.618)
O6: (-39.822,-14.128,124.640)
O4': (-44.423,-16.803,128.692)
C8: (-42.054,-16.083,127.602)
C2: (-43.060,-15.144,123.474)
C6: (-40.957,-14.619,124.641)
C5: (-41.582,-15.253,125.724)
C4: (-42.857,-15.763,125.582)
P: (-41.240,-17.193,131.551)
C4': (-44.365,-18.091,129.349)
C2': (-44.397,-18.465,126.991)
O2': (-45.748,-18.870,126.794)
N1: (-41.792,-14.605,123.522)
N2: (-43.722,-15.042,122.319)
N3: (-43.651,-15.746,124.490)
N7: (-41.083,-15.456,126.996)
N9: (-43.149,-16.313,126.810)
O5': (-42.218,-17.591,130.358)
O3': (-44.221,-20.396,128.521)
Image (generated by PyMOL):