Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1485:A1484
Extra
PDB:
ATOM 1 O3' G A1484 121.288 176.065 34.361 1.00116.48 O
ATOM 2 P A A1485 121.435 174.497 34.056 1.00115.65 P
ATOM 3 OP1 A A1485 122.453 174.031 35.038 1.00114.84 O
ATOM 4 OP2 A A1485 121.686 174.324 32.604 1.00115.07 O
ATOM 5 O5' A A1485 120.002 173.874 34.407 1.00114.81 O
ATOM 6 C5' A A1485 119.886 172.605 35.093 1.00112.02 C
ATOM 7 C4' A A1485 118.427 172.225 35.304 1.00110.46 C
ATOM 8 O4' A A1485 117.769 173.243 36.111 1.00108.65 O
ATOM 9 C3' A A1485 117.534 172.020 34.075 1.00109.92 C
ATOM 10 O3' A A1485 116.554 171.013 34.363 1.00111.48 O
ATOM 11 C2' A A1485 116.805 173.358 33.984 1.00108.70 C
ATOM 12 O2' A A1485 115.552 173.299 33.329 1.00109.20 O
ATOM 13 C1' A A1485 116.592 173.667 35.460 1.00106.94 C
ATOM 14 N9 A A1485 116.358 175.076 35.765 1.00104.49 N
ATOM 15 C8 A A1485 117.167 175.960 36.446 1.00103.78 C
ATOM 16 N7 A A1485 116.633 177.146 36.608 1.00102.79 N
ATOM 17 C5 A A1485 115.396 177.042 35.983 1.00102.54 C
ATOM 18 C6 A A1485 114.340 177.953 35.826 1.00101.78 C
ATOM 19 N6 A A1485 114.355 179.188 36.329 1.00101.23 N
ATOM 20 N1 A A1485 113.249 177.543 35.139 1.00101.54 N
ATOM 21 C2 A A1485 113.227 176.296 34.656 1.00101.51 C
ATOM 22 N3 A A1485 114.151 175.338 34.752 1.00102.22 N
ATOM 23 C4 A A1485 115.223 175.781 35.439 1.00103.14 C
ATOM 24 P A A1486 116.701 169.526 33.750 1.00112.09 P
ATOM 25 OP1 A A1486 117.725 169.555 32.668 1.00111.91 O
ATOM 26 OP2 A A1486 115.332 169.021 33.450 1.00111.89 O
ATOM 27 O5' A A1486 117.266 168.674 34.977 1.00111.68 O
TER
ATOM 1 O3' U B1483 121.656 179.628 29.920 1.00124.38 O
ATOM 2 P G B1484 122.013 178.093 29.579 1.00125.56 P
ATOM 3 OP1 G B1484 123.150 177.682 30.464 1.00125.51 O
ATOM 4 OP2 G B1484 122.136 177.914 28.107 1.00125.49 O
ATOM 5 O5' G B1484 120.701 177.327 30.069 1.00124.14 O
ATOM 6 C5' G B1484 120.670 176.552 31.287 1.00121.54 C
ATOM 7 C4' G B1484 120.689 177.455 32.497 1.00119.28 C
ATOM 8 O4' G B1484 119.754 178.540 32.311 1.00118.60 O
ATOM 9 C3' G B1484 120.222 176.798 33.781 1.00117.75 C
ATOM 10 O3' G B1484 121.288 176.065 34.361 1.00116.48 O
ATOM 11 C2' G B1484 119.811 177.994 34.632 1.00117.19 C
ATOM 12 O2' G B1484 120.927 178.599 35.242 1.00116.91 O
ATOM 13 C1' G B1484 119.265 178.952 33.571 1.00116.65 C
ATOM 14 N9 G B1484 117.819 179.121 33.482 1.00114.45 N
ATOM 15 C8 G B1484 117.107 180.186 33.975 1.00113.73 C
ATOM 16 N7 G B1484 115.837 180.126 33.694 1.00113.26 N
ATOM 17 C5 G B1484 115.695 178.942 32.981 1.00112.37 C
ATOM 18 C6 G B1484 114.540 178.357 32.390 1.00111.66 C
ATOM 19 O6 G B1484 113.377 178.789 32.364 1.00111.81 O
ATOM 20 N1 G B1484 114.839 177.149 31.777 1.00110.70 N
ATOM 21 C2 G B1484 116.081 176.575 31.729 1.00110.92 C
ATOM 22 N2 G B1484 116.158 175.392 31.107 1.00110.78 N
ATOM 23 N3 G B1484 117.169 177.116 32.256 1.00111.71 N
ATOM 24 C4 G B1484 116.904 178.294 32.863 1.00112.80 C
ATOM 25 P A B1485 121.435 174.497 34.056 1.00115.65 P
ATOM 26 OP1 A B1485 122.453 174.031 35.038 1.00114.84 O
ATOM 27 OP2 A B1485 121.686 174.324 32.604 1.00115.07 O
ATOM 28 O5' A B1485 120.002 173.874 34.407 1.00114.81 O
TER
ATOM 2 P A A1485 121.435 174.497 34.056 1.00115.65 P
ATOM 3 OP1 A A1485 122.453 174.031 35.038 1.00114.84 O
ATOM 4 OP2 A A1485 121.686 174.324 32.604 1.00115.07 O
ATOM 5 O5' A A1485 120.002 173.874 34.407 1.00114.81 O
ATOM 6 C5' A A1485 119.886 172.605 35.093 1.00112.02 C
ATOM 7 C4' A A1485 118.427 172.225 35.304 1.00110.46 C
ATOM 8 O4' A A1485 117.769 173.243 36.111 1.00108.65 O
ATOM 9 C3' A A1485 117.534 172.020 34.075 1.00109.92 C
ATOM 10 O3' A A1485 116.554 171.013 34.363 1.00111.48 O
ATOM 11 C2' A A1485 116.805 173.358 33.984 1.00108.70 C
ATOM 12 O2' A A1485 115.552 173.299 33.329 1.00109.20 O
ATOM 13 C1' A A1485 116.592 173.667 35.460 1.00106.94 C
ATOM 14 N9 A A1485 116.358 175.076 35.765 1.00104.49 N
ATOM 15 C8 A A1485 117.167 175.960 36.446 1.00103.78 C
ATOM 16 N7 A A1485 116.633 177.146 36.608 1.00102.79 N
ATOM 17 C5 A A1485 115.396 177.042 35.983 1.00102.54 C
ATOM 18 C6 A A1485 114.340 177.953 35.826 1.00101.78 C
ATOM 19 N6 A A1485 114.355 179.188 36.329 1.00101.23 N
ATOM 20 N1 A A1485 113.249 177.543 35.139 1.00101.54 N
ATOM 21 C2 A A1485 113.227 176.296 34.656 1.00101.51 C
ATOM 22 N3 A A1485 114.151 175.338 34.752 1.00102.22 N
ATOM 23 C4 A A1485 115.223 175.781 35.439 1.00103.14 C
ATOM 24 P A A1486 116.701 169.526 33.750 1.00112.09 P
ATOM 25 OP1 A A1486 117.725 169.555 32.668 1.00111.91 O
ATOM 26 OP2 A A1486 115.332 169.021 33.450 1.00111.89 O
ATOM 27 O5' A A1486 117.266 168.674 34.977 1.00111.68 O
TER
ATOM 1 O3' U B1483 121.656 179.628 29.920 1.00124.38 O
ATOM 2 P G B1484 122.013 178.093 29.579 1.00125.56 P
ATOM 3 OP1 G B1484 123.150 177.682 30.464 1.00125.51 O
ATOM 4 OP2 G B1484 122.136 177.914 28.107 1.00125.49 O
ATOM 5 O5' G B1484 120.701 177.327 30.069 1.00124.14 O
ATOM 6 C5' G B1484 120.670 176.552 31.287 1.00121.54 C
ATOM 7 C4' G B1484 120.689 177.455 32.497 1.00119.28 C
ATOM 8 O4' G B1484 119.754 178.540 32.311 1.00118.60 O
ATOM 9 C3' G B1484 120.222 176.798 33.781 1.00117.75 C
ATOM 10 O3' G B1484 121.288 176.065 34.361 1.00116.48 O
ATOM 11 C2' G B1484 119.811 177.994 34.632 1.00117.19 C
ATOM 12 O2' G B1484 120.927 178.599 35.242 1.00116.91 O
ATOM 13 C1' G B1484 119.265 178.952 33.571 1.00116.65 C
ATOM 14 N9 G B1484 117.819 179.121 33.482 1.00114.45 N
ATOM 15 C8 G B1484 117.107 180.186 33.975 1.00113.73 C
ATOM 16 N7 G B1484 115.837 180.126 33.694 1.00113.26 N
ATOM 17 C5 G B1484 115.695 178.942 32.981 1.00112.37 C
ATOM 18 C6 G B1484 114.540 178.357 32.390 1.00111.66 C
ATOM 19 O6 G B1484 113.377 178.789 32.364 1.00111.81 O
ATOM 20 N1 G B1484 114.839 177.149 31.777 1.00110.70 N
ATOM 21 C2 G B1484 116.081 176.575 31.729 1.00110.92 C
ATOM 22 N2 G B1484 116.158 175.392 31.107 1.00110.78 N
ATOM 23 N3 G B1484 117.169 177.116 32.256 1.00111.71 N
ATOM 24 C4 G B1484 116.904 178.294 32.863 1.00112.80 C
ATOM 25 P A B1485 121.435 174.497 34.056 1.00115.65 P
ATOM 26 OP1 A B1485 122.453 174.031 35.038 1.00114.84 O
ATOM 27 OP2 A B1485 121.686 174.324 32.604 1.00115.07 O
ATOM 28 O5' A B1485 120.002 173.874 34.407 1.00114.81 O
TER
Atoms:
OP1: (122.453,174.031,35.038)
OP2: (121.686,174.324,32.604)
C3': (117.534,172.020,34.075)
C1': (116.592,173.667,35.460)
C5': (119.886,172.605,35.093)
O4': (117.769,173.243,36.111)
C8: (117.167,175.960,36.446)
O2': (115.552,173.299,33.329)
C6: (114.340,177.953,35.826)
C5: (115.396,177.042,35.983)
C4: (115.223,175.781,35.439)
P: (121.435,174.497,34.056)
C4': (118.427,172.225,35.304)
C2': (116.805,173.358,33.984)
C2: (113.227,176.296,34.656)
N1: (113.249,177.543,35.139)
N3: (114.151,175.338,34.752)
N6: (114.355,179.188,36.329)
N7: (116.633,177.146,36.608)
N9: (116.358,175.076,35.765)
O5': (120.002,173.874,34.407)
O3': (116.554,171.013,34.363)
OP2: (121.686,174.324,32.604)
C3': (117.534,172.020,34.075)
C1': (116.592,173.667,35.460)
C5': (119.886,172.605,35.093)
O4': (117.769,173.243,36.111)
C8: (117.167,175.960,36.446)
O2': (115.552,173.299,33.329)
C6: (114.340,177.953,35.826)
C5: (115.396,177.042,35.983)
C4: (115.223,175.781,35.439)
P: (121.435,174.497,34.056)
C4': (118.427,172.225,35.304)
C2': (116.805,173.358,33.984)
C2: (113.227,176.296,34.656)
N1: (113.249,177.543,35.139)
N3: (114.151,175.338,34.752)
N6: (114.355,179.188,36.329)
N7: (116.633,177.146,36.608)
N9: (116.358,175.076,35.765)
O5': (120.002,173.874,34.407)
O3': (116.554,171.013,34.363)
OP1: (123.150,177.682,30.464)
OP2: (122.136,177.914,28.107)
C3': (120.222,176.798,33.781)
C1': (119.265,178.952,33.571)
C5': (120.670,176.552,31.287)
O6: (113.377,178.789,32.364)
O4': (119.754,178.540,32.311)
C8: (117.107,180.186,33.975)
C2: (116.081,176.575,31.729)
C6: (114.540,178.357,32.390)
C5: (115.695,178.942,32.981)
C4: (116.904,178.294,32.863)
P: (122.013,178.093,29.579)
C4': (120.689,177.455,32.497)
C2': (119.811,177.994,34.632)
O2': (120.927,178.599,35.242)
N1: (114.839,177.149,31.777)
N2: (116.158,175.392,31.107)
N3: (117.169,177.116,32.256)
N7: (115.837,180.126,33.694)
N9: (117.819,179.121,33.482)
O5': (120.701,177.327,30.069)
O3': (121.288,176.065,34.361)
OP2: (122.136,177.914,28.107)
C3': (120.222,176.798,33.781)
C1': (119.265,178.952,33.571)
C5': (120.670,176.552,31.287)
O6: (113.377,178.789,32.364)
O4': (119.754,178.540,32.311)
C8: (117.107,180.186,33.975)
C2: (116.081,176.575,31.729)
C6: (114.540,178.357,32.390)
C5: (115.695,178.942,32.981)
C4: (116.904,178.294,32.863)
P: (122.013,178.093,29.579)
C4': (120.689,177.455,32.497)
C2': (119.811,177.994,34.632)
O2': (120.927,178.599,35.242)
N1: (114.839,177.149,31.777)
N2: (116.158,175.392,31.107)
N3: (117.169,177.116,32.256)
N7: (115.837,180.126,33.694)
N9: (117.819,179.121,33.482)
O5': (120.701,177.327,30.069)
O3': (121.288,176.065,34.361)
Image (generated by PyMOL):