Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0390:0389
Extra
PDB:
ATOM 1 O3' C A 389 89.291 109.502 35.985 1.00 38.01 O
ATOM 2 P U A 390 90.682 109.260 35.207 1.00 37.37 P
ATOM 3 OP1 U A 390 91.095 110.562 34.629 1.00 38.19 O
ATOM 4 OP2 U A 390 90.544 108.081 34.321 1.00 39.63 O
ATOM 5 O5' U A 390 91.710 108.858 36.353 1.00 36.92 O
ATOM 6 C5' U A 390 92.022 109.767 37.418 1.00 35.84 C
ATOM 7 C4' U A 390 92.801 109.053 38.491 1.00 37.61 C
ATOM 8 O4' U A 390 91.974 108.016 39.080 1.00 38.31 O
ATOM 9 C3' U A 390 94.033 108.303 38.010 1.00 37.99 C
ATOM 10 O3' U A 390 95.149 109.163 37.841 1.00 39.24 O
ATOM 11 C2' U A 390 94.234 107.278 39.114 1.00 37.43 C
ATOM 12 O2' U A 390 94.815 107.817 40.281 1.00 38.23 O
ATOM 13 C1' U A 390 92.785 106.898 39.417 1.00 38.28 C
ATOM 14 N1 U A 390 92.343 105.739 38.626 1.00 36.58 N
ATOM 15 C2 U A 390 92.784 104.485 39.025 1.00 35.43 C
ATOM 16 O2 U A 390 93.504 104.311 39.997 1.00 34.57 O
ATOM 17 N3 U A 390 92.350 103.445 38.244 1.00 33.80 N
ATOM 18 C4 U A 390 91.538 103.527 37.135 1.00 34.51 C
ATOM 19 O4 U A 390 91.234 102.503 36.544 1.00 34.53 O
ATOM 20 C5 U A 390 91.118 104.851 36.787 1.00 35.75 C
ATOM 21 C6 U A 390 91.524 105.886 37.526 1.00 36.06 C
ATOM 22 P C A 391 96.145 108.940 36.601 1.00 39.64 P
ATOM 23 OP1 C A 391 96.941 110.191 36.471 1.00 40.08 O
ATOM 24 OP2 C A 391 95.362 108.443 35.444 1.00 38.49 O
ATOM 25 O5' C A 391 97.121 107.784 37.102 1.00 38.43 O
TER
ATOM 1 O3' C B 388 84.379 106.744 33.762 1.00 39.30 O
ATOM 2 P C B 389 85.940 106.711 33.372 1.00 39.99 P
ATOM 3 OP1 C B 389 86.132 107.719 32.295 1.00 42.74 O
ATOM 4 OP2 C B 389 86.371 105.308 33.148 1.00 40.43 O
ATOM 5 O5' C B 389 86.678 107.211 34.690 1.00 38.94 O
ATOM 6 C5' C B 389 86.344 108.473 35.285 1.00 37.34 C
ATOM 7 C4' C B 389 87.086 108.641 36.587 1.00 37.42 C
ATOM 8 O4' C B 389 86.614 107.662 37.551 1.00 36.18 O
ATOM 9 C3' C B 389 88.581 108.390 36.520 1.00 36.56 C
ATOM 10 O3' C B 389 89.291 109.502 35.985 1.00 38.01 O
ATOM 11 C2' C B 389 88.911 108.089 37.977 1.00 36.39 C
ATOM 12 O2' C B 389 88.946 109.243 38.796 1.00 35.93 O
ATOM 13 C1' C B 389 87.693 107.259 38.384 1.00 36.20 C
ATOM 14 N1 C B 389 87.892 105.799 38.247 1.00 35.80 N
ATOM 15 C2 C B 389 88.573 105.108 39.264 1.00 36.47 C
ATOM 16 O2 C B 389 89.021 105.742 40.231 1.00 38.38 O
ATOM 17 N3 C B 389 88.731 103.770 39.162 1.00 35.28 N
ATOM 18 C4 C B 389 88.249 103.123 38.102 1.00 34.44 C
ATOM 19 N4 C B 389 88.415 101.802 38.048 1.00 34.82 N
ATOM 20 C5 C B 389 87.571 103.799 37.049 1.00 33.56 C
ATOM 21 C6 C B 389 87.418 105.122 37.159 1.00 34.32 C
ATOM 22 P U B 390 90.682 109.260 35.207 1.00 37.37 P
ATOM 23 OP1 U B 390 91.095 110.562 34.629 1.00 38.19 O
ATOM 24 OP2 U B 390 90.544 108.081 34.321 1.00 39.63 O
ATOM 25 O5' U B 390 91.710 108.858 36.353 1.00 36.92 O
TER
ATOM 2 P U A 390 90.682 109.260 35.207 1.00 37.37 P
ATOM 3 OP1 U A 390 91.095 110.562 34.629 1.00 38.19 O
ATOM 4 OP2 U A 390 90.544 108.081 34.321 1.00 39.63 O
ATOM 5 O5' U A 390 91.710 108.858 36.353 1.00 36.92 O
ATOM 6 C5' U A 390 92.022 109.767 37.418 1.00 35.84 C
ATOM 7 C4' U A 390 92.801 109.053 38.491 1.00 37.61 C
ATOM 8 O4' U A 390 91.974 108.016 39.080 1.00 38.31 O
ATOM 9 C3' U A 390 94.033 108.303 38.010 1.00 37.99 C
ATOM 10 O3' U A 390 95.149 109.163 37.841 1.00 39.24 O
ATOM 11 C2' U A 390 94.234 107.278 39.114 1.00 37.43 C
ATOM 12 O2' U A 390 94.815 107.817 40.281 1.00 38.23 O
ATOM 13 C1' U A 390 92.785 106.898 39.417 1.00 38.28 C
ATOM 14 N1 U A 390 92.343 105.739 38.626 1.00 36.58 N
ATOM 15 C2 U A 390 92.784 104.485 39.025 1.00 35.43 C
ATOM 16 O2 U A 390 93.504 104.311 39.997 1.00 34.57 O
ATOM 17 N3 U A 390 92.350 103.445 38.244 1.00 33.80 N
ATOM 18 C4 U A 390 91.538 103.527 37.135 1.00 34.51 C
ATOM 19 O4 U A 390 91.234 102.503 36.544 1.00 34.53 O
ATOM 20 C5 U A 390 91.118 104.851 36.787 1.00 35.75 C
ATOM 21 C6 U A 390 91.524 105.886 37.526 1.00 36.06 C
ATOM 22 P C A 391 96.145 108.940 36.601 1.00 39.64 P
ATOM 23 OP1 C A 391 96.941 110.191 36.471 1.00 40.08 O
ATOM 24 OP2 C A 391 95.362 108.443 35.444 1.00 38.49 O
ATOM 25 O5' C A 391 97.121 107.784 37.102 1.00 38.43 O
TER
ATOM 1 O3' C B 388 84.379 106.744 33.762 1.00 39.30 O
ATOM 2 P C B 389 85.940 106.711 33.372 1.00 39.99 P
ATOM 3 OP1 C B 389 86.132 107.719 32.295 1.00 42.74 O
ATOM 4 OP2 C B 389 86.371 105.308 33.148 1.00 40.43 O
ATOM 5 O5' C B 389 86.678 107.211 34.690 1.00 38.94 O
ATOM 6 C5' C B 389 86.344 108.473 35.285 1.00 37.34 C
ATOM 7 C4' C B 389 87.086 108.641 36.587 1.00 37.42 C
ATOM 8 O4' C B 389 86.614 107.662 37.551 1.00 36.18 O
ATOM 9 C3' C B 389 88.581 108.390 36.520 1.00 36.56 C
ATOM 10 O3' C B 389 89.291 109.502 35.985 1.00 38.01 O
ATOM 11 C2' C B 389 88.911 108.089 37.977 1.00 36.39 C
ATOM 12 O2' C B 389 88.946 109.243 38.796 1.00 35.93 O
ATOM 13 C1' C B 389 87.693 107.259 38.384 1.00 36.20 C
ATOM 14 N1 C B 389 87.892 105.799 38.247 1.00 35.80 N
ATOM 15 C2 C B 389 88.573 105.108 39.264 1.00 36.47 C
ATOM 16 O2 C B 389 89.021 105.742 40.231 1.00 38.38 O
ATOM 17 N3 C B 389 88.731 103.770 39.162 1.00 35.28 N
ATOM 18 C4 C B 389 88.249 103.123 38.102 1.00 34.44 C
ATOM 19 N4 C B 389 88.415 101.802 38.048 1.00 34.82 N
ATOM 20 C5 C B 389 87.571 103.799 37.049 1.00 33.56 C
ATOM 21 C6 C B 389 87.418 105.122 37.159 1.00 34.32 C
ATOM 22 P U B 390 90.682 109.260 35.207 1.00 37.37 P
ATOM 23 OP1 U B 390 91.095 110.562 34.629 1.00 38.19 O
ATOM 24 OP2 U B 390 90.544 108.081 34.321 1.00 39.63 O
ATOM 25 O5' U B 390 91.710 108.858 36.353 1.00 36.92 O
TER
Atoms:
C4: (91.538,103.527,37.135)
N3: (92.350,103.445,38.244)
OP1: (91.095,110.562,34.629)
OP2: (90.544,108.081,34.321)
C2: (92.784,104.485,39.025)
C1': (92.785,106.898,39.417)
C3': (94.033,108.303,38.010)
O5': (91.710,108.858,36.353)
O4': (91.974,108.016,39.080)
C5': (92.022,109.767,37.418)
P: (90.682,109.260,35.207)
C4': (92.801,109.053,38.491)
C2': (94.234,107.278,39.114)
O2': (94.815,107.817,40.281)
N1: (92.343,105.739,38.626)
O4: (91.234,102.503,36.544)
O2: (93.504,104.311,39.997)
C6: (91.524,105.886,37.526)
C5: (91.118,104.851,36.787)
O3': (95.149,109.163,37.841)
N3: (92.350,103.445,38.244)
OP1: (91.095,110.562,34.629)
OP2: (90.544,108.081,34.321)
C2: (92.784,104.485,39.025)
C1': (92.785,106.898,39.417)
C3': (94.033,108.303,38.010)
O5': (91.710,108.858,36.353)
O4': (91.974,108.016,39.080)
C5': (92.022,109.767,37.418)
P: (90.682,109.260,35.207)
C4': (92.801,109.053,38.491)
C2': (94.234,107.278,39.114)
O2': (94.815,107.817,40.281)
N1: (92.343,105.739,38.626)
O4: (91.234,102.503,36.544)
O2: (93.504,104.311,39.997)
C6: (91.524,105.886,37.526)
C5: (91.118,104.851,36.787)
O3': (95.149,109.163,37.841)
C2: (88.573,105.108,39.264)
OP1: (86.132,107.719,32.295)
OP2: (86.371,105.308,33.148)
C4: (88.249,103.123,38.102)
O5': (86.678,107.211,34.690)
C3': (88.581,108.390,36.520)
C1': (87.693,107.259,38.384)
O4': (86.614,107.662,37.551)
C5': (86.344,108.473,35.285)
P: (85.940,106.711,33.372)
O2: (89.021,105.742,40.231)
C4': (87.086,108.641,36.587)
C2': (88.911,108.089,37.977)
O2': (88.946,109.243,38.796)
N1: (87.892,105.799,38.247)
N3: (88.731,103.770,39.162)
N4: (88.415,101.802,38.048)
C6: (87.418,105.122,37.159)
C5: (87.571,103.799,37.049)
O3': (89.291,109.502,35.985)
OP1: (86.132,107.719,32.295)
OP2: (86.371,105.308,33.148)
C4: (88.249,103.123,38.102)
O5': (86.678,107.211,34.690)
C3': (88.581,108.390,36.520)
C1': (87.693,107.259,38.384)
O4': (86.614,107.662,37.551)
C5': (86.344,108.473,35.285)
P: (85.940,106.711,33.372)
O2: (89.021,105.742,40.231)
C4': (87.086,108.641,36.587)
C2': (88.911,108.089,37.977)
O2': (88.946,109.243,38.796)
N1: (87.892,105.799,38.247)
N3: (88.731,103.770,39.162)
N4: (88.415,101.802,38.048)
C6: (87.418,105.122,37.159)
C5: (87.571,103.799,37.049)
O3': (89.291,109.502,35.985)
Image (generated by PyMOL):