Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K1V:A9:A10
Extra
PDB:
ATOM 1 O3' U A 8 -4.448 -14.149 17.768 1.00 20.46 O
ATOM 2 P A A 9 -5.031 -12.671 18.037 1.00 24.52 P
ATOM 3 OP1 A A 9 -3.943 -11.847 18.605 1.00 27.36 O
ATOM 4 OP2 A A 9 -6.310 -12.815 18.786 1.00 17.43 O
ATOM 5 O5' A A 9 -5.376 -12.132 16.578 1.00 23.65 O
ATOM 6 C5' A A 9 -4.333 -11.857 15.652 1.00 23.99 C
ATOM 7 C4' A A 9 -4.862 -11.808 14.234 1.00 22.54 C
ATOM 8 O4' A A 9 -5.417 -13.097 13.846 1.00 26.43 O
ATOM 9 C3' A A 9 -6.003 -10.852 13.929 1.00 17.51 C
ATOM 10 O3' A A 9 -5.544 -9.505 13.831 1.00 22.40 O
ATOM 11 C2' A A 9 -6.449 -11.388 12.577 1.00 21.45 C
ATOM 12 O2' A A 9 -5.523 -11.056 11.563 1.00 22.03 O
ATOM 13 C1' A A 9 -6.385 -12.898 12.822 1.00 22.34 C
ATOM 14 N9 A A 9 -7.674 -13.417 13.280 1.00 25.08 N
ATOM 15 C8 A A 9 -8.060 -13.744 14.558 1.00 25.56 C
ATOM 16 N7 A A 9 -9.307 -14.145 14.649 1.00 24.25 N
ATOM 17 C5 A A 9 -9.771 -14.089 13.342 1.00 28.83 C
ATOM 18 C6 A A 9 -11.025 -14.384 12.764 1.00 24.03 C
ATOM 19 N6 A A 9 -12.081 -14.815 13.458 1.00 24.63 N
ATOM 20 N1 A A 9 -11.155 -14.217 11.428 1.00 20.96 N
ATOM 21 C2 A A 9 -10.095 -13.789 10.730 1.00 20.96 C
ATOM 22 N3 A A 9 -8.867 -13.481 11.159 1.00 23.94 N
ATOM 23 C4 A A 9 -8.772 -13.651 12.487 1.00 21.08 C
ATOM 24 P G A 10 -6.538 -8.290 14.182 1.00 24.78 P
ATOM 25 OP1 G A 10 -5.713 -7.059 14.299 1.00 24.14 O
ATOM 26 OP2 G A 10 -7.404 -8.701 15.314 1.00 14.43 O
ATOM 27 O5' G A 10 -7.434 -8.141 12.870 1.00 26.93 O
TER
ATOM 1 O3' A B 9 -5.544 -9.505 13.831 1.00 22.40 O
ATOM 2 P G B 10 -6.538 -8.290 14.182 1.00 24.78 P
ATOM 3 OP1 G B 10 -5.713 -7.059 14.299 1.00 24.14 O
ATOM 4 OP2 G B 10 -7.404 -8.701 15.314 1.00 14.43 O
ATOM 5 O5' G B 10 -7.434 -8.141 12.870 1.00 26.93 O
ATOM 6 C5' G B 10 -6.822 -7.829 11.621 1.00 28.54 C
ATOM 7 C4' G B 10 -7.778 -8.084 10.482 1.00 30.62 C
ATOM 8 O4' G B 10 -8.157 -9.483 10.478 1.00 33.71 O
ATOM 9 C3' G B 10 -9.105 -7.346 10.545 1.00 32.76 C
ATOM 10 O3' G B 10 -8.983 -6.030 10.017 1.00 33.61 O
ATOM 11 C2' G B 10 -9.970 -8.210 9.640 1.00 34.33 C
ATOM 12 O2' G B 10 -9.706 -7.994 8.267 1.00 31.05 O
ATOM 13 C1' G B 10 -9.500 -9.611 10.033 1.00 29.25 C
ATOM 14 N9 G B 10 -10.298 -10.157 11.125 1.00 29.06 N
ATOM 15 C8 G B 10 -9.983 -10.154 12.463 1.00 28.94 C
ATOM 16 N7 G B 10 -10.907 -10.694 13.208 1.00 31.38 N
ATOM 17 C5 G B 10 -11.889 -11.087 12.309 1.00 35.27 C
ATOM 18 C6 G B 10 -13.135 -11.733 12.531 1.00 32.21 C
ATOM 19 O6 G B 10 -13.635 -12.095 13.602 1.00 34.97 O
ATOM 20 N1 G B 10 -13.820 -11.947 11.340 1.00 30.87 N
ATOM 21 C2 G B 10 -13.369 -11.583 10.094 1.00 34.24 C
ATOM 22 N2 G B 10 -14.179 -11.876 9.066 1.00 21.45 N
ATOM 23 N3 G B 10 -12.211 -10.976 9.873 1.00 30.68 N
ATOM 24 C4 G B 10 -11.527 -10.764 11.018 1.00 33.25 C
TER
ATOM 2 P A A 9 -5.031 -12.671 18.037 1.00 24.52 P
ATOM 3 OP1 A A 9 -3.943 -11.847 18.605 1.00 27.36 O
ATOM 4 OP2 A A 9 -6.310 -12.815 18.786 1.00 17.43 O
ATOM 5 O5' A A 9 -5.376 -12.132 16.578 1.00 23.65 O
ATOM 6 C5' A A 9 -4.333 -11.857 15.652 1.00 23.99 C
ATOM 7 C4' A A 9 -4.862 -11.808 14.234 1.00 22.54 C
ATOM 8 O4' A A 9 -5.417 -13.097 13.846 1.00 26.43 O
ATOM 9 C3' A A 9 -6.003 -10.852 13.929 1.00 17.51 C
ATOM 10 O3' A A 9 -5.544 -9.505 13.831 1.00 22.40 O
ATOM 11 C2' A A 9 -6.449 -11.388 12.577 1.00 21.45 C
ATOM 12 O2' A A 9 -5.523 -11.056 11.563 1.00 22.03 O
ATOM 13 C1' A A 9 -6.385 -12.898 12.822 1.00 22.34 C
ATOM 14 N9 A A 9 -7.674 -13.417 13.280 1.00 25.08 N
ATOM 15 C8 A A 9 -8.060 -13.744 14.558 1.00 25.56 C
ATOM 16 N7 A A 9 -9.307 -14.145 14.649 1.00 24.25 N
ATOM 17 C5 A A 9 -9.771 -14.089 13.342 1.00 28.83 C
ATOM 18 C6 A A 9 -11.025 -14.384 12.764 1.00 24.03 C
ATOM 19 N6 A A 9 -12.081 -14.815 13.458 1.00 24.63 N
ATOM 20 N1 A A 9 -11.155 -14.217 11.428 1.00 20.96 N
ATOM 21 C2 A A 9 -10.095 -13.789 10.730 1.00 20.96 C
ATOM 22 N3 A A 9 -8.867 -13.481 11.159 1.00 23.94 N
ATOM 23 C4 A A 9 -8.772 -13.651 12.487 1.00 21.08 C
ATOM 24 P G A 10 -6.538 -8.290 14.182 1.00 24.78 P
ATOM 25 OP1 G A 10 -5.713 -7.059 14.299 1.00 24.14 O
ATOM 26 OP2 G A 10 -7.404 -8.701 15.314 1.00 14.43 O
ATOM 27 O5' G A 10 -7.434 -8.141 12.870 1.00 26.93 O
TER
ATOM 1 O3' A B 9 -5.544 -9.505 13.831 1.00 22.40 O
ATOM 2 P G B 10 -6.538 -8.290 14.182 1.00 24.78 P
ATOM 3 OP1 G B 10 -5.713 -7.059 14.299 1.00 24.14 O
ATOM 4 OP2 G B 10 -7.404 -8.701 15.314 1.00 14.43 O
ATOM 5 O5' G B 10 -7.434 -8.141 12.870 1.00 26.93 O
ATOM 6 C5' G B 10 -6.822 -7.829 11.621 1.00 28.54 C
ATOM 7 C4' G B 10 -7.778 -8.084 10.482 1.00 30.62 C
ATOM 8 O4' G B 10 -8.157 -9.483 10.478 1.00 33.71 O
ATOM 9 C3' G B 10 -9.105 -7.346 10.545 1.00 32.76 C
ATOM 10 O3' G B 10 -8.983 -6.030 10.017 1.00 33.61 O
ATOM 11 C2' G B 10 -9.970 -8.210 9.640 1.00 34.33 C
ATOM 12 O2' G B 10 -9.706 -7.994 8.267 1.00 31.05 O
ATOM 13 C1' G B 10 -9.500 -9.611 10.033 1.00 29.25 C
ATOM 14 N9 G B 10 -10.298 -10.157 11.125 1.00 29.06 N
ATOM 15 C8 G B 10 -9.983 -10.154 12.463 1.00 28.94 C
ATOM 16 N7 G B 10 -10.907 -10.694 13.208 1.00 31.38 N
ATOM 17 C5 G B 10 -11.889 -11.087 12.309 1.00 35.27 C
ATOM 18 C6 G B 10 -13.135 -11.733 12.531 1.00 32.21 C
ATOM 19 O6 G B 10 -13.635 -12.095 13.602 1.00 34.97 O
ATOM 20 N1 G B 10 -13.820 -11.947 11.340 1.00 30.87 N
ATOM 21 C2 G B 10 -13.369 -11.583 10.094 1.00 34.24 C
ATOM 22 N2 G B 10 -14.179 -11.876 9.066 1.00 21.45 N
ATOM 23 N3 G B 10 -12.211 -10.976 9.873 1.00 30.68 N
ATOM 24 C4 G B 10 -11.527 -10.764 11.018 1.00 33.25 C
TER
Atoms:
OP1: (-3.943,-11.847,18.605)
OP2: (-6.310,-12.815,18.786)
C3': (-6.003,-10.852,13.929)
C1': (-6.385,-12.898,12.822)
C5': (-4.333,-11.857,15.652)
O4': (-5.417,-13.097,13.846)
C8: (-8.060,-13.744,14.558)
O2': (-5.523,-11.056,11.563)
C6: (-11.025,-14.384,12.764)
C5: (-9.771,-14.089,13.342)
C4: (-8.772,-13.651,12.487)
P: (-5.031,-12.671,18.037)
C4': (-4.862,-11.808,14.234)
C2': (-6.449,-11.388,12.577)
C2: (-10.095,-13.789,10.730)
N1: (-11.155,-14.217,11.428)
N3: (-8.867,-13.481,11.159)
N6: (-12.081,-14.815,13.458)
N7: (-9.307,-14.145,14.649)
N9: (-7.674,-13.417,13.280)
O5': (-5.376,-12.132,16.578)
O3': (-5.544,-9.505,13.831)
OP2: (-6.310,-12.815,18.786)
C3': (-6.003,-10.852,13.929)
C1': (-6.385,-12.898,12.822)
C5': (-4.333,-11.857,15.652)
O4': (-5.417,-13.097,13.846)
C8: (-8.060,-13.744,14.558)
O2': (-5.523,-11.056,11.563)
C6: (-11.025,-14.384,12.764)
C5: (-9.771,-14.089,13.342)
C4: (-8.772,-13.651,12.487)
P: (-5.031,-12.671,18.037)
C4': (-4.862,-11.808,14.234)
C2': (-6.449,-11.388,12.577)
C2: (-10.095,-13.789,10.730)
N1: (-11.155,-14.217,11.428)
N3: (-8.867,-13.481,11.159)
N6: (-12.081,-14.815,13.458)
N7: (-9.307,-14.145,14.649)
N9: (-7.674,-13.417,13.280)
O5': (-5.376,-12.132,16.578)
O3': (-5.544,-9.505,13.831)
OP1: (-5.713,-7.059,14.299)
OP2: (-7.404,-8.701,15.314)
C3': (-9.105,-7.346,10.545)
C1': (-9.500,-9.611,10.033)
C5': (-6.822,-7.829,11.621)
O6: (-13.635,-12.095,13.602)
O4': (-8.157,-9.483,10.478)
C8: (-9.983,-10.154,12.463)
C2: (-13.369,-11.583,10.094)
C6: (-13.135,-11.733,12.531)
C5: (-11.889,-11.087,12.309)
C4: (-11.527,-10.764,11.018)
P: (-6.538,-8.290,14.182)
C4': (-7.778,-8.084,10.482)
C2': (-9.970,-8.210,9.640)
O2': (-9.706,-7.994,8.267)
N1: (-13.820,-11.947,11.340)
N2: (-14.179,-11.876,9.066)
N3: (-12.211,-10.976,9.873)
N7: (-10.907,-10.694,13.208)
N9: (-10.298,-10.157,11.125)
O5': (-7.434,-8.141,12.870)
O3': (-8.983,-6.030,10.017)
OP2: (-7.404,-8.701,15.314)
C3': (-9.105,-7.346,10.545)
C1': (-9.500,-9.611,10.033)
C5': (-6.822,-7.829,11.621)
O6: (-13.635,-12.095,13.602)
O4': (-8.157,-9.483,10.478)
C8: (-9.983,-10.154,12.463)
C2: (-13.369,-11.583,10.094)
C6: (-13.135,-11.733,12.531)
C5: (-11.889,-11.087,12.309)
C4: (-11.527,-10.764,11.018)
P: (-6.538,-8.290,14.182)
C4': (-7.778,-8.084,10.482)
C2': (-9.970,-8.210,9.640)
O2': (-9.706,-7.994,8.267)
N1: (-13.820,-11.947,11.340)
N2: (-14.179,-11.876,9.066)
N3: (-12.211,-10.976,9.873)
N7: (-10.907,-10.694,13.208)
N9: (-10.298,-10.157,11.125)
O5': (-7.434,-8.141,12.870)
O3': (-8.983,-6.030,10.017)
Image (generated by PyMOL):