ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A697:A698

Extra

PDB:
ATOM 1 O3' U A 696 51.800 -39.483 -20.231 1.00 35.66 O
ATOM 2 P A A 697 51.005 -38.086 -20.125 1.00 44.19 P
ATOM 3 OP1 A A 697 51.093 -37.577 -18.712 1.00 33.01 O
ATOM 4 OP2 A A 697 49.658 -38.239 -20.758 1.00 47.52 O
ATOM 5 O5' A A 697 51.850 -37.161 -21.106 1.00 37.29 O
ATOM 6 C5' A A 697 53.271 -37.160 -21.060 1.00 39.52 C
ATOM 7 C4' A A 697 53.804 -36.193 -22.073 1.00 39.58 C
ATOM 8 O4' A A 697 54.092 -36.879 -23.311 1.00 37.82 O
ATOM 9 C3' A A 697 52.843 -35.093 -22.482 1.00 39.37 C
ATOM 10 O3' A A 697 52.789 -34.022 -21.551 1.00 35.91 O
ATOM 11 C2' A A 697 53.399 -34.664 -23.825 1.00 36.59 C
ATOM 12 O2' A A 697 54.484 -33.788 -23.671 1.00 37.95 O
ATOM 13 C1' A A 697 53.913 -35.984 -24.388 1.00 35.39 C
ATOM 14 N9 A A 697 52.961 -36.547 -25.340 1.00 37.00 N
ATOM 15 C8 A A 697 51.941 -37.437 -25.131 1.00 39.42 C
ATOM 16 N7 A A 697 51.249 -37.704 -26.215 1.00 39.19 N
ATOM 17 C5 A A 697 51.855 -36.935 -27.198 1.00 36.24 C
ATOM 18 C6 A A 697 51.579 -36.756 -28.559 1.00 39.56 C
ATOM 19 N6 A A 697 50.574 -37.342 -29.190 1.00 41.07 N
ATOM 20 N1 A A 697 52.385 -35.934 -29.260 1.00 44.78 N
ATOM 21 C2 A A 697 53.396 -35.326 -28.620 1.00 43.05 C
ATOM 22 N3 A A 697 53.748 -35.404 -27.344 1.00 41.02 N
ATOM 23 C4 A A 697 52.923 -36.234 -26.678 1.00 39.83 C
ATOM 24 P G A 698 51.435 -33.166 -21.408 1.00 35.13 P
ATOM 25 OP1 G A 698 51.634 -32.270 -20.243 1.00 31.24 O
ATOM 26 OP2 G A 698 50.251 -34.083 -21.430 1.00 38.99 O
ATOM 27 O5' G A 698 51.390 -32.334 -22.770 1.00 31.34 O
TER

ATOM 1 O3' A B 697 52.789 -34.022 -21.551 1.00 35.91 O
ATOM 2 P G B 698 51.435 -33.166 -21.408 1.00 35.13 P
ATOM 3 OP1 G B 698 51.634 -32.270 -20.243 1.00 31.24 O
ATOM 4 OP2 G B 698 50.251 -34.083 -21.430 1.00 38.99 O
ATOM 5 O5' G B 698 51.390 -32.334 -22.770 1.00 31.34 O
ATOM 6 C5' G B 698 52.501 -31.555 -23.179 1.00 37.30 C
ATOM 7 C4' G B 698 52.242 -30.910 -24.519 1.00 38.69 C
ATOM 8 O4' G B 698 52.405 -31.872 -25.583 1.00 39.10 O
ATOM 9 C3' G B 698 50.878 -30.282 -24.765 1.00 37.33 C
ATOM 10 O3' G B 698 50.773 -28.977 -24.205 1.00 37.74 O
ATOM 11 C2' G B 698 50.810 -30.242 -26.290 1.00 41.94 C
ATOM 12 O2' G B 698 51.426 -29.096 -26.854 1.00 45.70 O
ATOM 13 C1' G B 698 51.586 -31.506 -26.673 1.00 37.70 C
ATOM 14 N9 G B 698 50.688 -32.615 -26.953 1.00 37.76 N
ATOM 15 C8 G B 698 50.124 -33.470 -26.039 1.00 36.38 C
ATOM 16 N7 G B 698 49.349 -34.364 -26.589 1.00 37.93 N
ATOM 17 C5 G B 698 49.406 -34.086 -27.947 1.00 37.91 C
ATOM 18 C6 G B 698 48.755 -34.709 -29.034 1.00 40.94 C
ATOM 19 O6 G B 698 47.968 -35.665 -29.012 1.00 40.70 O
ATOM 20 N1 G B 698 49.084 -34.104 -30.244 1.00 43.75 N
ATOM 21 C2 G B 698 49.928 -33.028 -30.388 1.00 39.92 C
ATOM 22 N2 G B 698 50.130 -32.600 -31.640 1.00 37.28 N
ATOM 23 N3 G B 698 50.531 -32.423 -29.377 1.00 39.42 N
ATOM 24 C4 G B 698 50.228 -33.006 -28.191 1.00 38.32 C
ATOM 25 P C B 699 49.329 -28.398 -23.806 1.00 44.12 P
ATOM 26 OP1 C B 699 49.574 -27.140 -23.058 1.00 46.20 O
ATOM 27 OP2 C B 699 48.546 -29.484 -23.165 1.00 39.03 O
ATOM 28 O5' C B 699 48.653 -28.057 -25.206 1.00 33.44 O
TER

Atoms:
OP1: (51.093,-37.577,-18.712)
OP2: (49.658,-38.239,-20.758)
C3': (52.843,-35.093,-22.482)
C1': (53.913,-35.984,-24.388)
C5': (53.271,-37.160,-21.060)
O4': (54.092,-36.879,-23.311)
C8: (51.941,-37.437,-25.131)
O2': (54.484,-33.788,-23.671)
C6: (51.579,-36.756,-28.559)
C5: (51.855,-36.935,-27.198)
C4: (52.923,-36.234,-26.678)
P: (51.005,-38.086,-20.125)
C4': (53.804,-36.193,-22.073)
C2': (53.399,-34.664,-23.825)
C2: (53.396,-35.326,-28.620)
N1: (52.385,-35.934,-29.260)
N3: (53.748,-35.404,-27.344)
N6: (50.574,-37.342,-29.190)
N7: (51.249,-37.704,-26.215)
N9: (52.961,-36.547,-25.340)
O5': (51.850,-37.161,-21.106)
O3': (52.789,-34.022,-21.551)
OP1: (51.634,-32.270,-20.243)
OP2: (50.251,-34.083,-21.430)
C3': (50.878,-30.282,-24.765)
C1': (51.586,-31.506,-26.673)
C5': (52.501,-31.555,-23.179)
O6: (47.968,-35.665,-29.012)
O4': (52.405,-31.872,-25.583)
C8: (50.124,-33.470,-26.039)
C2: (49.928,-33.028,-30.388)
C6: (48.755,-34.709,-29.034)
C5: (49.406,-34.086,-27.947)
C4: (50.228,-33.006,-28.191)
P: (51.435,-33.166,-21.408)
C4': (52.242,-30.910,-24.519)
C2': (50.810,-30.242,-26.290)
O2': (51.426,-29.096,-26.854)
N1: (49.084,-34.104,-30.244)
N2: (50.130,-32.600,-31.640)
N3: (50.531,-32.423,-29.377)
N7: (49.349,-34.364,-26.589)
N9: (50.688,-32.615,-26.953)
O5': (51.390,-32.334,-22.770)
O3': (50.773,-28.977,-24.205)
Image (generated by PyMOL):
PyMOL image
show in jmol