ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0497:0500

Extra

PDB:
ATOM 1 O3' A A 496 14.013 151.827 62.792 1.00 55.02 O
ATOM 2 P A A 497 14.082 153.263 63.505 1.00 57.65 P
ATOM 3 OP1 A A 497 13.338 153.136 64.775 1.00 59.50 O
ATOM 4 OP2 A A 497 13.717 154.336 62.545 1.00 56.81 O
ATOM 5 O5' A A 497 15.616 153.419 63.892 1.00 59.55 O
ATOM 6 C5' A A 497 16.592 153.662 62.886 1.00 60.12 C
ATOM 7 C4' A A 497 17.974 153.613 63.471 1.00 59.72 C
ATOM 8 O4' A A 497 18.916 153.814 62.391 1.00 59.31 O
ATOM 9 C3' A A 497 18.310 154.667 64.519 1.00 61.03 C
ATOM 10 O3' A A 497 19.330 154.196 65.396 1.00 65.18 O
ATOM 11 C2' A A 497 18.835 155.818 63.671 1.00 60.66 C
ATOM 12 O2' A A 497 19.795 156.586 64.361 1.00 63.08 O
ATOM 13 C1' A A 497 19.491 155.097 62.489 1.00 59.93 C
ATOM 14 N9 A A 497 19.280 155.788 61.212 1.00 58.93 N
ATOM 15 C8 A A 497 18.243 156.621 60.858 1.00 57.75 C
ATOM 16 N7 A A 497 18.365 157.138 59.663 1.00 57.79 N
ATOM 17 C5 A A 497 19.552 156.602 59.187 1.00 57.36 C
ATOM 18 C6 A A 497 20.250 156.769 57.976 1.00 56.86 C
ATOM 19 N6 A A 497 19.849 157.575 56.991 1.00 54.43 N
ATOM 20 N1 A A 497 21.397 156.077 57.814 1.00 55.79 N
ATOM 21 C2 A A 497 21.814 155.288 58.809 1.00 55.53 C
ATOM 22 N3 A A 497 21.256 155.057 59.994 1.00 56.82 N
ATOM 23 C4 A A 497 20.115 155.753 60.123 1.00 57.37 C
ATOM 24 P U A 498 19.083 154.161 66.994 1.00 66.37 P
ATOM 25 OP1 U A 498 17.697 154.572 67.312 1.00 65.58 O
ATOM 26 OP2 U A 498 20.215 154.860 67.647 1.00 67.61 O
ATOM 27 O5' U A 498 19.235 152.617 67.332 1.00 69.36 O
TER

ATOM 1 O3' A B 499 23.179 151.556 62.415 1.00 50.10 O
ATOM 2 P G B 500 23.384 152.859 63.336 1.00 47.91 P
ATOM 3 OP1 G B 500 24.539 152.545 64.212 1.00 48.41 O
ATOM 4 OP2 G B 500 22.102 153.274 63.948 1.00 48.51 O
ATOM 5 O5' G B 500 23.811 153.990 62.301 1.00 49.18 O
ATOM 6 C5' G B 500 24.923 153.796 61.413 1.00 49.02 C
ATOM 7 C4' G B 500 25.679 155.089 61.244 1.00 49.73 C
ATOM 8 O4' G B 500 24.813 156.052 60.583 1.00 49.23 O
ATOM 9 C3' G B 500 26.148 155.764 62.535 1.00 50.58 C
ATOM 10 O3' G B 500 27.356 156.479 62.271 1.00 52.85 O
ATOM 11 C2' G B 500 25.030 156.767 62.799 1.00 50.97 C
ATOM 12 O2' G B 500 25.416 157.871 63.590 1.00 50.48 O
ATOM 13 C1' G B 500 24.726 157.218 61.376 1.00 49.82 C
ATOM 14 N9 G B 500 23.429 157.847 61.158 1.00 49.62 N
ATOM 15 C8 G B 500 22.367 157.918 62.025 1.00 49.48 C
ATOM 16 N7 G B 500 21.355 158.581 61.538 1.00 51.74 N
ATOM 17 C5 G B 500 21.773 158.964 60.271 1.00 49.98 C
ATOM 18 C6 G B 500 21.101 159.707 59.267 1.00 50.13 C
ATOM 19 O6 G B 500 19.970 160.209 59.308 1.00 49.99 O
ATOM 20 N1 G B 500 21.884 159.847 58.126 1.00 47.74 N
ATOM 21 C2 G B 500 23.153 159.344 57.972 1.00 49.06 C
ATOM 22 N2 G B 500 23.747 159.557 56.786 1.00 48.40 N
ATOM 23 N3 G B 500 23.794 158.670 58.907 1.00 49.54 N
ATOM 24 C4 G B 500 23.047 158.514 60.020 1.00 49.92 C
ATOM 25 P A B 501 28.461 156.659 63.429 1.00 53.46 P
ATOM 26 OP1 A B 501 27.914 156.062 64.672 1.00 50.66 O
ATOM 27 OP2 A B 501 28.904 158.078 63.435 1.00 54.24 O
ATOM 28 O5' A B 501 29.685 155.787 62.904 1.00 50.73 O
TER

Atoms:
OP1: (13.338,153.136,64.775)
OP2: (13.717,154.336,62.545)
C3': (18.310,154.667,64.519)
C1': (19.491,155.097,62.489)
C5': (16.592,153.662,62.886)
O4': (18.916,153.814,62.391)
C8: (18.243,156.621,60.858)
O2': (19.795,156.586,64.361)
C6: (20.250,156.769,57.976)
C5: (19.552,156.602,59.187)
C4: (20.115,155.753,60.123)
P: (14.082,153.263,63.505)
C4': (17.974,153.613,63.471)
C2': (18.835,155.818,63.671)
C2: (21.814,155.288,58.809)
N1: (21.397,156.077,57.814)
N3: (21.256,155.057,59.994)
N6: (19.849,157.575,56.991)
N7: (18.365,157.138,59.663)
N9: (19.280,155.788,61.212)
O5': (15.616,153.419,63.892)
O3': (19.330,154.196,65.396)
OP1: (24.539,152.545,64.212)
OP2: (22.102,153.274,63.948)
C3': (26.148,155.764,62.535)
C1': (24.726,157.218,61.376)
C5': (24.923,153.796,61.413)
O6: (19.970,160.209,59.308)
O4': (24.813,156.052,60.583)
C8: (22.367,157.918,62.025)
C2: (23.153,159.344,57.972)
C6: (21.101,159.707,59.267)
C5: (21.773,158.964,60.271)
C4: (23.047,158.514,60.020)
P: (23.384,152.859,63.336)
C4': (25.679,155.089,61.244)
C2': (25.030,156.767,62.799)
O2': (25.416,157.871,63.590)
N1: (21.884,159.847,58.126)
N2: (23.747,159.557,56.786)
N3: (23.794,158.670,58.907)
N7: (21.355,158.581,61.538)
N9: (23.429,157.847,61.158)
O5': (23.811,153.990,62.301)
O3': (27.356,156.479,62.271)
Image (generated by PyMOL):
PyMOL image
show in jmol