ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01057:01058

Extra

PDB:
ATOM 1 O3' A A1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 2 P A A1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 3 OP1 A A1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 4 OP2 A A1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 5 O5' A A1057 23.558 92.981 111.804 1.00 38.05 O
ATOM 6 C5' A A1057 24.773 92.591 111.147 1.00 38.07 C
ATOM 7 C4' A A1057 25.583 93.813 110.805 1.00 37.74 C
ATOM 8 O4' A A1057 24.839 94.609 109.855 1.00 38.03 O
ATOM 9 C3' A A1057 25.834 94.767 111.960 1.00 37.85 C
ATOM 10 O3' A A1057 26.957 94.369 112.729 1.00 39.13 O
ATOM 11 C2' A A1057 26.080 96.085 111.249 1.00 37.10 C
ATOM 12 O2' A A1057 27.394 96.194 110.751 1.00 37.29 O
ATOM 13 C1' A A1057 25.098 95.982 110.081 1.00 38.55 C
ATOM 14 N9 A A1057 23.834 96.672 110.334 1.00 39.23 N
ATOM 15 C8 A A1057 22.727 96.227 111.013 1.00 39.39 C
ATOM 16 N7 A A1057 21.779 97.126 111.123 1.00 39.73 N
ATOM 17 C5 A A1057 22.289 98.233 110.458 1.00 40.65 C
ATOM 18 C6 A A1057 21.779 99.529 110.234 1.00 40.50 C
ATOM 19 N6 A A1057 20.600 99.953 110.685 1.00 41.37 N
ATOM 20 N1 A A1057 22.541 100.387 109.526 1.00 40.51 N
ATOM 21 C2 A A1057 23.733 99.970 109.083 1.00 40.72 C
ATOM 22 N3 A A1057 24.324 98.789 109.236 1.00 39.94 N
ATOM 23 C4 A A1057 23.543 97.957 109.945 1.00 40.21 C
ATOM 24 P G A1058 26.966 94.611 114.315 1.00 41.50 P
ATOM 25 OP1 G A1058 28.382 94.500 114.719 1.00 40.21 O
ATOM 26 OP2 G A1058 25.955 93.733 114.953 1.00 41.46 O
ATOM 27 O5' G A1058 26.517 96.129 114.491 1.00 39.38 O
TER

ATOM 1 O3' A B1057 26.957 94.369 112.729 1.00 39.13 O
ATOM 2 P G B1058 26.966 94.611 114.315 1.00 41.50 P
ATOM 3 OP1 G B1058 28.382 94.500 114.719 1.00 40.21 O
ATOM 4 OP2 G B1058 25.955 93.733 114.953 1.00 41.46 O
ATOM 5 O5' G B1058 26.517 96.129 114.491 1.00 39.38 O
ATOM 6 C5' G B1058 27.457 97.191 114.266 1.00 42.00 C
ATOM 7 C4' G B1058 26.753 98.521 114.228 1.00 43.17 C
ATOM 8 O4' G B1058 25.688 98.450 113.247 1.00 45.34 O
ATOM 9 C3' G B1058 26.036 98.937 115.497 1.00 43.84 C
ATOM 10 O3' G B1058 26.887 99.537 116.444 1.00 45.10 O
ATOM 11 C2' G B1058 25.022 99.932 114.969 1.00 45.81 C
ATOM 12 O2' G B1058 25.584 101.201 114.686 1.00 47.19 O
ATOM 13 C1' G B1058 24.584 99.229 113.683 1.00 45.74 C
ATOM 14 N9 G B1058 23.467 98.328 113.954 1.00 45.00 N
ATOM 15 C8 G B1058 23.511 96.961 114.104 1.00 45.47 C
ATOM 16 N7 G B1058 22.348 96.441 114.391 1.00 45.34 N
ATOM 17 C5 G B1058 21.485 97.529 114.421 1.00 44.81 C
ATOM 18 C6 G B1058 20.097 97.592 114.687 1.00 44.34 C
ATOM 19 O6 G B1058 19.320 96.664 114.952 1.00 46.26 O
ATOM 20 N1 G B1058 19.623 98.899 114.618 1.00 42.43 N
ATOM 21 C2 G B1058 20.386 99.998 114.319 1.00 42.24 C
ATOM 22 N2 G B1058 19.748 101.168 114.266 1.00 42.26 N
ATOM 23 N3 G B1058 21.678 99.953 114.079 1.00 42.56 N
ATOM 24 C4 G B1058 22.160 98.698 114.145 1.00 43.96 C
ATOM 25 P G B1059 26.526 99.430 118.000 1.00 47.69 P
ATOM 26 OP1 G B1059 27.625 100.090 118.741 1.00 47.21 O
ATOM 27 OP2 G B1059 26.185 98.012 118.296 1.00 47.81 O
ATOM 28 O5' G B1059 25.214 100.318 118.171 1.00 46.35 O
TER

Atoms:
OP1: (22.954,90.664,112.499)
OP2: (21.322,92.605,112.827)
C3': (25.834,94.767,111.960)
C1': (25.098,95.982,110.081)
C5': (24.773,92.591,111.147)
O4': (24.839,94.609,109.855)
C8: (22.727,96.227,111.013)
O2': (27.394,96.194,110.751)
C6: (21.779,99.529,110.234)
C5: (22.289,98.233,110.458)
C4: (23.543,97.957,109.945)
P: (22.378,91.943,112.028)
C4': (25.583,93.813,110.805)
C2': (26.080,96.085,111.249)
C2: (23.733,99.970,109.083)
N1: (22.541,100.387,109.526)
N3: (24.324,98.789,109.236)
N6: (20.600,99.953,110.685)
N7: (21.779,97.126,111.123)
N9: (23.834,96.672,110.334)
O5': (23.558,92.981,111.804)
O3': (26.957,94.369,112.729)
OP1: (28.382,94.500,114.719)
OP2: (25.955,93.733,114.953)
C3': (26.036,98.937,115.497)
C1': (24.584,99.229,113.683)
C5': (27.457,97.191,114.266)
O6: (19.320,96.664,114.952)
O4': (25.688,98.450,113.247)
C8: (23.511,96.961,114.104)
C2: (20.386,99.998,114.319)
C6: (20.097,97.592,114.687)
C5: (21.485,97.529,114.421)
C4: (22.160,98.698,114.145)
P: (26.966,94.611,114.315)
C4': (26.753,98.521,114.228)
C2': (25.022,99.932,114.969)
O2': (25.584,101.201,114.686)
N1: (19.623,98.899,114.618)
N2: (19.748,101.168,114.266)
N3: (21.678,99.953,114.079)
N7: (22.348,96.441,114.391)
N9: (23.467,98.328,113.954)
O5': (26.517,96.129,114.491)
O3': (26.887,99.537,116.444)
Image (generated by PyMOL):
PyMOL image
show in jmol