Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02120:02121
Extra
PDB:
ATOM 1 O3' C A2119 88.779 117.075 65.631 1.00 40.94 O
ATOM 2 P A A2120 87.436 116.585 66.364 1.00 41.04 P
ATOM 3 OP1 A A2120 86.467 117.703 66.268 1.00 40.41 O
ATOM 4 OP2 A A2120 87.809 116.044 67.697 1.00 41.12 O
ATOM 5 O5' A A2120 86.920 115.370 65.473 1.00 38.35 O
ATOM 6 C5' A A2120 86.315 115.604 64.188 1.00 37.00 C
ATOM 7 C4' A A2120 85.736 114.321 63.624 1.00 35.38 C
ATOM 8 O4' A A2120 86.792 113.374 63.315 1.00 34.42 O
ATOM 9 C3' A A2120 84.822 113.536 64.539 1.00 34.17 C
ATOM 10 O3' A A2120 83.519 114.086 64.595 1.00 32.99 O
ATOM 11 C2' A A2120 84.850 112.161 63.897 1.00 33.58 C
ATOM 12 O2' A A2120 84.097 112.115 62.704 1.00 35.46 O
ATOM 13 C1' A A2120 86.321 112.052 63.519 1.00 33.04 C
ATOM 14 N9 A A2120 87.108 111.439 64.582 1.00 31.34 N
ATOM 15 C8 A A2120 87.832 112.071 65.551 1.00 32.07 C
ATOM 16 N7 A A2120 88.438 111.254 66.376 1.00 33.21 N
ATOM 17 C5 A A2120 88.087 109.997 65.918 1.00 30.63 C
ATOM 18 C6 A A2120 88.403 108.719 66.369 1.00 30.11 C
ATOM 19 N6 A A2120 89.194 108.491 67.409 1.00 30.19 N
ATOM 20 N1 A A2120 87.880 107.666 65.706 1.00 31.10 N
ATOM 21 C2 A A2120 87.102 107.903 64.649 1.00 31.90 C
ATOM 22 N3 A A2120 86.737 109.068 64.118 1.00 33.33 N
ATOM 23 C4 A A2120 87.268 110.092 64.813 1.00 32.58 C
ATOM 24 P G A2121 82.567 113.707 65.826 1.00 32.87 P
ATOM 25 OP1 G A2121 81.326 114.512 65.735 1.00 33.02 O
ATOM 26 OP2 G A2121 83.371 113.727 67.068 1.00 32.84 O
ATOM 27 O5' G A2121 82.175 112.196 65.534 1.00 34.93 O
TER
ATOM 1 O3' A B2120 83.519 114.086 64.595 1.00 32.99 O
ATOM 2 P G B2121 82.567 113.707 65.826 1.00 32.87 P
ATOM 3 OP1 G B2121 81.326 114.512 65.735 1.00 33.02 O
ATOM 4 OP2 G B2121 83.371 113.727 67.068 1.00 32.84 O
ATOM 5 O5' G B2121 82.175 112.196 65.534 1.00 34.93 O
ATOM 6 C5' G B2121 81.458 111.859 64.331 1.00 36.37 C
ATOM 7 C4' G B2121 81.288 110.372 64.227 1.00 33.81 C
ATOM 8 O4' G B2121 82.593 109.761 64.248 1.00 34.31 O
ATOM 9 C3' G B2121 80.560 109.735 65.389 1.00 34.42 C
ATOM 10 O3' G B2121 79.163 109.874 65.172 1.00 35.20 O
ATOM 11 C2' G B2121 81.066 108.301 65.336 1.00 33.92 C
ATOM 12 O2' G B2121 80.462 107.561 64.300 1.00 35.20 O
ATOM 13 C1' G B2121 82.519 108.519 64.913 1.00 34.92 C
ATOM 14 N9 G B2121 83.515 108.504 65.978 1.00 34.44 N
ATOM 15 C8 G B2121 84.107 109.581 66.596 1.00 33.24 C
ATOM 16 N7 G B2121 84.986 109.235 67.494 1.00 31.63 N
ATOM 17 C5 G B2121 84.967 107.849 67.472 1.00 34.10 C
ATOM 18 C6 G B2121 85.702 106.913 68.233 1.00 35.20 C
ATOM 19 O6 G B2121 86.539 107.133 69.114 1.00 35.99 O
ATOM 20 N1 G B2121 85.373 105.600 67.888 1.00 34.94 N
ATOM 21 C2 G B2121 84.442 105.239 66.937 1.00 34.33 C
ATOM 22 N2 G B2121 84.244 103.921 66.757 1.00 29.40 N
ATOM 23 N3 G B2121 83.752 106.109 66.221 1.00 33.20 N
ATOM 24 C4 G B2121 84.062 107.385 66.540 1.00 34.02 C
ATOM 25 P U B2122 78.141 109.731 66.402 1.00 36.22 P
ATOM 26 OP1 U B2122 76.800 109.913 65.793 1.00 34.82 O
ATOM 27 OP2 U B2122 78.545 110.605 67.532 1.00 32.72 O
ATOM 28 O5' U B2122 78.334 108.205 66.818 1.00 34.69 O
TER
ATOM 2 P A A2120 87.436 116.585 66.364 1.00 41.04 P
ATOM 3 OP1 A A2120 86.467 117.703 66.268 1.00 40.41 O
ATOM 4 OP2 A A2120 87.809 116.044 67.697 1.00 41.12 O
ATOM 5 O5' A A2120 86.920 115.370 65.473 1.00 38.35 O
ATOM 6 C5' A A2120 86.315 115.604 64.188 1.00 37.00 C
ATOM 7 C4' A A2120 85.736 114.321 63.624 1.00 35.38 C
ATOM 8 O4' A A2120 86.792 113.374 63.315 1.00 34.42 O
ATOM 9 C3' A A2120 84.822 113.536 64.539 1.00 34.17 C
ATOM 10 O3' A A2120 83.519 114.086 64.595 1.00 32.99 O
ATOM 11 C2' A A2120 84.850 112.161 63.897 1.00 33.58 C
ATOM 12 O2' A A2120 84.097 112.115 62.704 1.00 35.46 O
ATOM 13 C1' A A2120 86.321 112.052 63.519 1.00 33.04 C
ATOM 14 N9 A A2120 87.108 111.439 64.582 1.00 31.34 N
ATOM 15 C8 A A2120 87.832 112.071 65.551 1.00 32.07 C
ATOM 16 N7 A A2120 88.438 111.254 66.376 1.00 33.21 N
ATOM 17 C5 A A2120 88.087 109.997 65.918 1.00 30.63 C
ATOM 18 C6 A A2120 88.403 108.719 66.369 1.00 30.11 C
ATOM 19 N6 A A2120 89.194 108.491 67.409 1.00 30.19 N
ATOM 20 N1 A A2120 87.880 107.666 65.706 1.00 31.10 N
ATOM 21 C2 A A2120 87.102 107.903 64.649 1.00 31.90 C
ATOM 22 N3 A A2120 86.737 109.068 64.118 1.00 33.33 N
ATOM 23 C4 A A2120 87.268 110.092 64.813 1.00 32.58 C
ATOM 24 P G A2121 82.567 113.707 65.826 1.00 32.87 P
ATOM 25 OP1 G A2121 81.326 114.512 65.735 1.00 33.02 O
ATOM 26 OP2 G A2121 83.371 113.727 67.068 1.00 32.84 O
ATOM 27 O5' G A2121 82.175 112.196 65.534 1.00 34.93 O
TER
ATOM 1 O3' A B2120 83.519 114.086 64.595 1.00 32.99 O
ATOM 2 P G B2121 82.567 113.707 65.826 1.00 32.87 P
ATOM 3 OP1 G B2121 81.326 114.512 65.735 1.00 33.02 O
ATOM 4 OP2 G B2121 83.371 113.727 67.068 1.00 32.84 O
ATOM 5 O5' G B2121 82.175 112.196 65.534 1.00 34.93 O
ATOM 6 C5' G B2121 81.458 111.859 64.331 1.00 36.37 C
ATOM 7 C4' G B2121 81.288 110.372 64.227 1.00 33.81 C
ATOM 8 O4' G B2121 82.593 109.761 64.248 1.00 34.31 O
ATOM 9 C3' G B2121 80.560 109.735 65.389 1.00 34.42 C
ATOM 10 O3' G B2121 79.163 109.874 65.172 1.00 35.20 O
ATOM 11 C2' G B2121 81.066 108.301 65.336 1.00 33.92 C
ATOM 12 O2' G B2121 80.462 107.561 64.300 1.00 35.20 O
ATOM 13 C1' G B2121 82.519 108.519 64.913 1.00 34.92 C
ATOM 14 N9 G B2121 83.515 108.504 65.978 1.00 34.44 N
ATOM 15 C8 G B2121 84.107 109.581 66.596 1.00 33.24 C
ATOM 16 N7 G B2121 84.986 109.235 67.494 1.00 31.63 N
ATOM 17 C5 G B2121 84.967 107.849 67.472 1.00 34.10 C
ATOM 18 C6 G B2121 85.702 106.913 68.233 1.00 35.20 C
ATOM 19 O6 G B2121 86.539 107.133 69.114 1.00 35.99 O
ATOM 20 N1 G B2121 85.373 105.600 67.888 1.00 34.94 N
ATOM 21 C2 G B2121 84.442 105.239 66.937 1.00 34.33 C
ATOM 22 N2 G B2121 84.244 103.921 66.757 1.00 29.40 N
ATOM 23 N3 G B2121 83.752 106.109 66.221 1.00 33.20 N
ATOM 24 C4 G B2121 84.062 107.385 66.540 1.00 34.02 C
ATOM 25 P U B2122 78.141 109.731 66.402 1.00 36.22 P
ATOM 26 OP1 U B2122 76.800 109.913 65.793 1.00 34.82 O
ATOM 27 OP2 U B2122 78.545 110.605 67.532 1.00 32.72 O
ATOM 28 O5' U B2122 78.334 108.205 66.818 1.00 34.69 O
TER
Atoms:
OP1: (86.467,117.703,66.268)
OP2: (87.809,116.044,67.697)
C3': (84.822,113.536,64.539)
C1': (86.321,112.052,63.519)
C5': (86.315,115.604,64.188)
O4': (86.792,113.374,63.315)
C8: (87.832,112.071,65.551)
O2': (84.097,112.115,62.704)
C6: (88.403,108.719,66.369)
C5: (88.087,109.997,65.918)
C4: (87.268,110.092,64.813)
P: (87.436,116.585,66.364)
C4': (85.736,114.321,63.624)
C2': (84.850,112.161,63.897)
C2: (87.102,107.903,64.649)
N1: (87.880,107.666,65.706)
N3: (86.737,109.068,64.118)
N6: (89.194,108.491,67.409)
N7: (88.438,111.254,66.376)
N9: (87.108,111.439,64.582)
O5': (86.920,115.370,65.473)
O3': (83.519,114.086,64.595)
OP2: (87.809,116.044,67.697)
C3': (84.822,113.536,64.539)
C1': (86.321,112.052,63.519)
C5': (86.315,115.604,64.188)
O4': (86.792,113.374,63.315)
C8: (87.832,112.071,65.551)
O2': (84.097,112.115,62.704)
C6: (88.403,108.719,66.369)
C5: (88.087,109.997,65.918)
C4: (87.268,110.092,64.813)
P: (87.436,116.585,66.364)
C4': (85.736,114.321,63.624)
C2': (84.850,112.161,63.897)
C2: (87.102,107.903,64.649)
N1: (87.880,107.666,65.706)
N3: (86.737,109.068,64.118)
N6: (89.194,108.491,67.409)
N7: (88.438,111.254,66.376)
N9: (87.108,111.439,64.582)
O5': (86.920,115.370,65.473)
O3': (83.519,114.086,64.595)
OP1: (81.326,114.512,65.735)
OP2: (83.371,113.727,67.068)
C3': (80.560,109.735,65.389)
C1': (82.519,108.519,64.913)
C5': (81.458,111.859,64.331)
O6: (86.539,107.133,69.114)
O4': (82.593,109.761,64.248)
C8: (84.107,109.581,66.596)
C2: (84.442,105.239,66.937)
C6: (85.702,106.913,68.233)
C5: (84.967,107.849,67.472)
C4: (84.062,107.385,66.540)
P: (82.567,113.707,65.826)
C4': (81.288,110.372,64.227)
C2': (81.066,108.301,65.336)
O2': (80.462,107.561,64.300)
N1: (85.373,105.600,67.888)
N2: (84.244,103.921,66.757)
N3: (83.752,106.109,66.221)
N7: (84.986,109.235,67.494)
N9: (83.515,108.504,65.978)
O5': (82.175,112.196,65.534)
O3': (79.163,109.874,65.172)
OP2: (83.371,113.727,67.068)
C3': (80.560,109.735,65.389)
C1': (82.519,108.519,64.913)
C5': (81.458,111.859,64.331)
O6: (86.539,107.133,69.114)
O4': (82.593,109.761,64.248)
C8: (84.107,109.581,66.596)
C2: (84.442,105.239,66.937)
C6: (85.702,106.913,68.233)
C5: (84.967,107.849,67.472)
C4: (84.062,107.385,66.540)
P: (82.567,113.707,65.826)
C4': (81.288,110.372,64.227)
C2': (81.066,108.301,65.336)
O2': (80.462,107.561,64.300)
N1: (85.373,105.600,67.888)
N2: (84.244,103.921,66.757)
N3: (83.752,106.109,66.221)
N7: (84.986,109.235,67.494)
N9: (83.515,108.504,65.978)
O5': (82.175,112.196,65.534)
O3': (79.163,109.874,65.172)
Image (generated by PyMOL):