ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:972:973

Extra

PDB:
ATOM 1 O3' C A 71 39.172 46.688 116.773 1.00 80.46 O
ATOM 2 P A A 72 38.916 48.009 117.652 1.00 83.50 P
ATOM 3 OP1 A A 72 37.591 48.552 117.248 1.00 83.07 O
ATOM 4 OP2 A A 72 40.124 48.874 117.574 1.00 83.52 O
ATOM 5 O5' A A 72 38.817 47.477 119.151 1.00 83.73 O
ATOM 6 C5' A A 72 37.693 46.695 119.590 1.00 84.25 C
ATOM 7 C4' A A 72 37.764 46.469 121.082 1.00 85.08 C
ATOM 8 O4' A A 72 38.938 45.678 121.413 1.00 85.38 O
ATOM 9 C3' A A 72 37.936 47.711 121.937 1.00 85.58 C
ATOM 10 O3' A A 72 36.717 48.415 122.122 1.00 84.79 O
ATOM 11 C2' A A 72 38.468 47.126 123.239 1.00 86.14 C
ATOM 12 O2' A A 72 37.446 46.542 124.025 1.00 86.89 O
ATOM 13 C1' A A 72 39.393 46.025 122.713 1.00 86.01 C
ATOM 14 N9 A A 72 40.794 46.438 122.626 1.00 86.95 N
ATOM 15 C8 A A 72 41.477 46.916 121.531 1.00 87.34 C
ATOM 16 N7 A A 72 42.736 47.199 121.774 1.00 87.68 N
ATOM 17 C5 A A 72 42.895 46.888 123.118 1.00 87.51 C
ATOM 18 C6 A A 72 44.002 46.965 123.980 1.00 87.73 C
ATOM 19 N6 A A 72 45.208 47.399 123.602 1.00 87.73 N
ATOM 20 N1 A A 72 43.827 46.575 125.261 1.00 87.99 N
ATOM 21 C2 A A 72 42.621 46.143 125.641 1.00 88.92 C
ATOM 22 N3 A A 72 41.505 46.027 124.928 1.00 88.37 N
ATOM 23 C4 A A 72 41.709 46.420 123.657 1.00 87.71 C
ATOM 24 P G A 73 36.756 49.986 122.457 1.00 83.77 P
ATOM 25 OP1 G A 73 35.344 50.429 122.589 1.00 83.58 O
ATOM 26 OP2 G A 73 37.641 50.647 121.462 1.00 83.33 O
ATOM 27 O5' G A 73 37.451 50.075 123.892 1.00 81.82 O
TER

ATOM 1 O3' A B 72 36.717 48.415 122.122 1.00 84.79 O
ATOM 2 P G B 73 36.756 49.986 122.457 1.00 83.77 P
ATOM 3 OP1 G B 73 35.344 50.429 122.589 1.00 83.58 O
ATOM 4 OP2 G B 73 37.641 50.647 121.462 1.00 83.33 O
ATOM 5 O5' G B 73 37.451 50.075 123.892 1.00 81.82 O
ATOM 6 C5' G B 73 36.760 49.634 125.080 1.00 79.10 C
ATOM 7 C4' G B 73 37.678 49.678 126.282 1.00 77.50 C
ATOM 8 O4' G B 73 38.821 48.811 126.051 1.00 76.81 O
ATOM 9 C3' G B 73 38.318 51.015 126.620 1.00 77.95 C
ATOM 10 O3' G B 73 37.443 51.883 127.332 1.00 77.25 O
ATOM 11 C2' G B 73 39.506 50.590 127.473 1.00 77.47 C
ATOM 12 O2' G B 73 39.152 50.277 128.806 1.00 78.04 O
ATOM 13 C1' G B 73 39.951 49.317 126.750 1.00 76.55 C
ATOM 14 N9 G B 73 41.028 49.568 125.796 1.00 75.94 N
ATOM 15 C8 G B 73 40.932 49.664 124.428 1.00 75.45 C
ATOM 16 N7 G B 73 42.075 49.920 123.851 1.00 74.94 N
ATOM 17 C5 G B 73 42.981 49.993 124.900 1.00 74.98 C
ATOM 18 C6 G B 73 44.375 50.251 124.893 1.00 75.00 C
ATOM 19 O6 G B 73 45.110 50.476 123.928 1.00 75.81 O
ATOM 20 N1 G B 73 44.906 50.233 126.178 1.00 75.16 N
ATOM 21 C2 G B 73 44.188 49.996 127.325 1.00 75.69 C
ATOM 22 N2 G B 73 44.878 50.013 128.476 1.00 74.88 N
ATOM 23 N3 G B 73 42.887 49.757 127.344 1.00 75.77 N
ATOM 24 C4 G B 73 42.352 49.771 126.105 1.00 75.37 C
ATOM 25 P G B 74 37.642 53.477 127.223 1.00 78.14 P
ATOM 26 OP1 G B 74 36.688 54.099 128.181 1.00 77.81 O
ATOM 27 OP2 G B 74 37.596 53.862 125.786 1.00 77.79 O
ATOM 28 O5' G B 74 39.118 53.732 127.769 1.00 74.17 O
TER

Atoms:
OP1: (37.591,48.552,117.248)
OP2: (40.124,48.874,117.574)
C3': (37.936,47.711,121.937)
C1': (39.393,46.025,122.713)
C5': (37.693,46.695,119.590)
O4': (38.938,45.678,121.413)
C8: (41.477,46.916,121.531)
O2': (37.446,46.542,124.025)
C6: (44.002,46.965,123.980)
C5: (42.895,46.888,123.118)
C4: (41.709,46.420,123.657)
P: (38.916,48.009,117.652)
C4': (37.764,46.469,121.082)
C2': (38.468,47.126,123.239)
C2: (42.621,46.143,125.641)
N1: (43.827,46.575,125.261)
N3: (41.505,46.027,124.928)
N6: (45.208,47.399,123.602)
N7: (42.736,47.199,121.774)
N9: (40.794,46.438,122.626)
O5': (38.817,47.477,119.151)
O3': (36.717,48.415,122.122)
OP1: (35.344,50.429,122.589)
OP2: (37.641,50.647,121.462)
C3': (38.318,51.015,126.620)
C1': (39.951,49.317,126.750)
C5': (36.760,49.634,125.080)
O6: (45.110,50.476,123.928)
O4': (38.821,48.811,126.051)
C8: (40.932,49.664,124.428)
C2: (44.188,49.996,127.325)
C6: (44.375,50.251,124.893)
C5: (42.981,49.993,124.900)
C4: (42.352,49.771,126.105)
P: (36.756,49.986,122.457)
C4': (37.678,49.678,126.282)
C2': (39.506,50.590,127.473)
O2': (39.152,50.277,128.806)
N1: (44.906,50.233,126.178)
N2: (44.878,50.013,128.476)
N3: (42.887,49.757,127.344)
N7: (42.075,49.920,123.851)
N9: (41.028,49.568,125.796)
O5': (37.451,50.075,123.892)
O3': (37.443,51.883,127.332)
Image (generated by PyMOL):
PyMOL image
show in jmol