ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FEU:F14:F15

Extra

PDB:
ATOM 1 O3' U A 13 -9.203 31.355 -4.083 1.00 23.33 O
ATOM 2 P A A 14 -9.853 32.795 -4.374 1.00 21.41 P
ATOM 3 OP1 A A 14 -11.089 32.603 -5.176 1.00 26.05 O
ATOM 4 OP2 A A 14 -8.770 33.666 -4.894 1.00 23.98 O
ATOM 5 O5' A A 14 -10.262 33.326 -2.929 1.00 23.00 O
ATOM 6 C5' A A 14 -11.253 32.650 -2.161 1.00 20.94 C
ATOM 7 C4' A A 14 -11.440 33.329 -0.823 1.00 20.16 C
ATOM 8 O4' A A 14 -10.208 33.266 -0.059 1.00 20.04 O
ATOM 9 C3' A A 14 -11.753 34.812 -0.871 1.00 19.49 C
ATOM 10 O3' A A 14 -13.138 35.021 -1.103 1.00 21.92 O
ATOM 11 C2' A A 14 -11.351 35.268 0.527 1.00 19.31 C
ATOM 12 O2' A A 14 -12.341 34.993 1.497 1.00 18.90 O
ATOM 13 C1' A A 14 -10.117 34.401 0.787 1.00 18.21 C
ATOM 14 N9 A A 14 -8.866 35.100 0.500 1.00 19.72 N
ATOM 15 C8 A A 14 -7.949 34.842 -0.490 1.00 18.17 C
ATOM 16 N7 A A 14 -6.921 35.655 -0.482 1.00 17.02 N
ATOM 17 C5 A A 14 -7.178 36.507 0.584 1.00 17.43 C
ATOM 18 C6 A A 14 -6.466 37.593 1.118 1.00 16.98 C
ATOM 19 N6 A A 14 -5.302 38.026 0.632 1.00 17.12 N
ATOM 20 N1 A A 14 -6.999 38.230 2.184 1.00 17.95 N
ATOM 21 C2 A A 14 -8.168 37.795 2.671 1.00 18.09 C
ATOM 22 N3 A A 14 -8.930 36.786 2.256 1.00 17.77 N
ATOM 23 C4 A A 14 -8.371 36.176 1.196 1.00 17.52 C
ATOM 24 P G A 15 -13.611 36.262 -2.002 1.00 21.80 P
ATOM 25 OP1 G A 15 -15.085 36.385 -1.873 1.00 19.44 O
ATOM 26 OP2 G A 15 -13.003 36.093 -3.346 1.00 18.36 O
ATOM 27 O5' G A 15 -12.937 37.523 -1.298 1.00 20.94 O
TER

ATOM 1 O3' A B 14 -13.138 35.021 -1.103 1.00 21.92 O
ATOM 2 P G B 15 -13.611 36.262 -2.002 1.00 21.80 P
ATOM 3 OP1 G B 15 -15.085 36.385 -1.873 1.00 19.44 O
ATOM 4 OP2 G B 15 -13.003 36.093 -3.346 1.00 18.36 O
ATOM 5 O5' G B 15 -12.937 37.523 -1.298 1.00 20.94 O
ATOM 6 C5' G B 15 -13.463 38.045 -0.081 1.00 21.89 C
ATOM 7 C4' G B 15 -12.576 39.147 0.449 1.00 23.57 C
ATOM 8 O4' G B 15 -11.263 38.611 0.773 1.00 23.75 O
ATOM 9 C3' G B 15 -12.262 40.266 -0.526 1.00 24.90 C
ATOM 10 O3' G B 15 -13.320 41.205 -0.612 1.00 26.97 O
ATOM 11 C2' G B 15 -11.007 40.864 0.091 1.00 25.06 C
ATOM 12 O2' G B 15 -11.275 41.684 1.211 1.00 27.82 O
ATOM 13 C1' G B 15 -10.269 39.598 0.522 1.00 23.54 C
ATOM 14 N9 G B 15 -9.411 39.129 -0.561 1.00 21.69 N
ATOM 15 C8 G B 15 -9.661 38.103 -1.440 1.00 20.62 C
ATOM 16 N7 G B 15 -8.719 37.952 -2.331 1.00 20.99 N
ATOM 17 C5 G B 15 -7.787 38.931 -2.014 1.00 19.42 C
ATOM 18 C6 G B 15 -6.553 39.261 -2.632 1.00 18.83 C
ATOM 19 O6 G B 15 -6.021 38.737 -3.618 1.00 21.80 O
ATOM 20 N1 G B 15 -5.925 40.322 -1.985 1.00 19.39 N
ATOM 21 C2 G B 15 -6.420 40.981 -0.885 1.00 19.36 C
ATOM 22 N2 G B 15 -5.665 41.976 -0.396 1.00 20.65 N
ATOM 23 N3 G B 15 -7.570 40.686 -0.305 1.00 19.58 N
ATOM 24 C4 G B 15 -8.195 39.658 -0.917 1.00 20.67 C
ATOM 25 P G B 16 -13.559 41.998 -1.989 1.00 28.38 P
ATOM 26 OP1 G B 16 -14.805 42.796 -1.867 1.00 28.81 O
ATOM 27 OP2 G B 16 -13.424 41.008 -3.087 1.00 28.42 O
ATOM 28 O5' G B 16 -12.320 42.996 -2.077 1.00 28.55 O
TER

Atoms:
OP1: (-11.089,32.603,-5.176)
OP2: (-8.770,33.666,-4.894)
C3': (-11.753,34.812,-0.871)
C1': (-10.117,34.401,0.787)
C5': (-11.253,32.650,-2.161)
O4': (-10.208,33.266,-0.059)
C8: (-7.949,34.842,-0.490)
O2': (-12.341,34.993,1.497)
C6: (-6.466,37.593,1.118)
C5: (-7.178,36.507,0.584)
C4: (-8.371,36.176,1.196)
P: (-9.853,32.795,-4.374)
C4': (-11.440,33.329,-0.823)
C2': (-11.351,35.268,0.527)
C2: (-8.168,37.795,2.671)
N1: (-6.999,38.230,2.184)
N3: (-8.930,36.786,2.256)
N6: (-5.302,38.026,0.632)
N7: (-6.921,35.655,-0.482)
N9: (-8.866,35.100,0.500)
O5': (-10.262,33.326,-2.929)
O3': (-13.138,35.021,-1.103)
OP1: (-15.085,36.385,-1.873)
OP2: (-13.003,36.093,-3.346)
C3': (-12.262,40.266,-0.526)
C1': (-10.269,39.598,0.522)
C5': (-13.463,38.045,-0.081)
O6: (-6.021,38.737,-3.618)
O4': (-11.263,38.611,0.773)
C8: (-9.661,38.103,-1.440)
C2: (-6.420,40.981,-0.885)
C6: (-6.553,39.261,-2.632)
C5: (-7.787,38.931,-2.014)
C4: (-8.195,39.658,-0.917)
P: (-13.611,36.262,-2.002)
C4': (-12.576,39.147,0.449)
C2': (-11.007,40.864,0.091)
O2': (-11.275,41.684,1.211)
N1: (-5.925,40.322,-1.985)
N2: (-5.665,41.976,-0.396)
N3: (-7.570,40.686,-0.305)
N7: (-8.719,37.952,-2.331)
N9: (-9.411,39.129,-0.561)
O5': (-12.937,37.523,-1.298)
O3': (-13.320,41.205,-0.612)
Image (generated by PyMOL):
PyMOL image
show in jmol