Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:085:087
Extra
PDB:
ATOM 1 O3' G A 84 36.758 165.338 19.399 1.00 58.13 O
ATOM 2 P A A 85 36.503 166.553 18.375 1.00 59.57 P
ATOM 3 OP1 A A 85 37.835 167.039 17.929 1.00 57.81 O
ATOM 4 OP2 A A 85 35.539 167.506 18.996 1.00 58.64 O
ATOM 5 O5' A A 85 35.766 165.861 17.143 1.00 61.54 O
ATOM 6 C5' A A 85 34.593 165.040 17.342 1.00 64.24 C
ATOM 7 C4' A A 85 33.714 165.092 16.116 1.00 66.47 C
ATOM 8 O4' A A 85 32.639 164.118 16.227 1.00 66.85 O
ATOM 9 C3' A A 85 33.043 166.438 15.869 1.00 68.84 C
ATOM 10 O3' A A 85 32.919 166.663 14.470 1.00 71.11 O
ATOM 11 C2' A A 85 31.659 166.233 16.470 1.00 68.96 C
ATOM 12 O2' A A 85 30.698 167.111 15.913 1.00 69.34 O
ATOM 13 C1' A A 85 31.394 164.774 16.097 1.00 68.44 C
ATOM 14 N9 A A 85 30.415 164.094 16.948 1.00 69.26 N
ATOM 15 C8 A A 85 29.229 163.525 16.551 1.00 69.22 C
ATOM 16 N7 A A 85 28.535 163.006 17.533 1.00 69.61 N
ATOM 17 C5 A A 85 29.317 163.244 18.656 1.00 70.56 C
ATOM 18 C6 A A 85 29.131 162.950 20.020 1.00 70.79 C
ATOM 19 N6 A A 85 28.055 162.324 20.504 1.00 71.09 N
ATOM 20 N1 A A 85 30.100 163.330 20.882 1.00 70.65 N
ATOM 21 C2 A A 85 31.178 163.959 20.397 1.00 69.99 C
ATOM 22 N3 A A 85 31.466 164.292 19.141 1.00 70.08 N
ATOM 23 C4 A A 85 30.483 163.905 18.309 1.00 70.10 C
ATOM 24 P A A 86 33.673 167.909 13.794 1.00 71.57 P
ATOM 25 OP1 A A 86 33.631 169.075 14.726 1.00 71.06 O
ATOM 26 OP2 A A 86 33.081 168.032 12.436 1.00 72.95 O
ATOM 27 O5' A A 86 35.184 167.417 13.644 1.00 67.78 O
TER
ATOM 1 O3' A B 86 38.547 164.591 13.673 1.00 64.80 O
ATOM 2 P G B 87 38.269 163.014 13.774 1.00 64.65 P
ATOM 3 OP1 G B 87 39.524 162.318 14.164 1.00 63.08 O
ATOM 4 OP2 G B 87 37.571 162.614 12.529 1.00 65.00 O
ATOM 5 O5' G B 87 37.215 162.890 14.962 1.00 65.49 O
ATOM 6 C5' G B 87 37.610 163.059 16.338 1.00 63.80 C
ATOM 7 C4' G B 87 37.039 161.939 17.173 1.00 61.95 C
ATOM 8 O4' G B 87 35.588 161.996 17.105 1.00 62.25 O
ATOM 9 C3' G B 87 37.422 160.543 16.702 1.00 60.86 C
ATOM 10 O3' G B 87 37.460 159.672 17.819 1.00 60.09 O
ATOM 11 C2' G B 87 36.270 160.180 15.774 1.00 60.99 C
ATOM 12 O2' G B 87 36.099 158.787 15.608 1.00 59.66 O
ATOM 13 C1' G B 87 35.085 160.820 16.499 1.00 62.45 C
ATOM 14 N9 G B 87 33.995 161.207 15.606 1.00 63.82 N
ATOM 15 C8 G B 87 34.104 161.932 14.443 1.00 64.33 C
ATOM 16 N7 G B 87 32.963 162.109 13.839 1.00 64.91 N
ATOM 17 C5 G B 87 32.039 161.468 14.651 1.00 65.02 C
ATOM 18 C6 G B 87 30.637 161.318 14.502 1.00 65.60 C
ATOM 19 O6 G B 87 29.910 161.729 13.588 1.00 66.49 O
ATOM 20 N1 G B 87 30.086 160.603 15.556 1.00 65.37 N
ATOM 21 C2 G B 87 30.789 160.093 16.614 1.00 65.31 C
ATOM 22 N2 G B 87 30.068 159.430 17.523 1.00 66.56 N
ATOM 23 N3 G B 87 32.098 160.220 16.767 1.00 64.66 N
ATOM 24 C4 G B 87 32.656 160.914 15.753 1.00 64.39 C
ATOM 25 P A B 88 38.800 158.857 18.147 1.00 60.01 P
ATOM 26 OP1 A B 88 39.866 159.265 17.190 1.00 60.68 O
ATOM 27 OP2 A B 88 38.439 157.429 18.263 1.00 59.98 O
ATOM 28 O5' A B 88 39.195 159.386 19.593 1.00 58.87 O
TER
ATOM 2 P A A 85 36.503 166.553 18.375 1.00 59.57 P
ATOM 3 OP1 A A 85 37.835 167.039 17.929 1.00 57.81 O
ATOM 4 OP2 A A 85 35.539 167.506 18.996 1.00 58.64 O
ATOM 5 O5' A A 85 35.766 165.861 17.143 1.00 61.54 O
ATOM 6 C5' A A 85 34.593 165.040 17.342 1.00 64.24 C
ATOM 7 C4' A A 85 33.714 165.092 16.116 1.00 66.47 C
ATOM 8 O4' A A 85 32.639 164.118 16.227 1.00 66.85 O
ATOM 9 C3' A A 85 33.043 166.438 15.869 1.00 68.84 C
ATOM 10 O3' A A 85 32.919 166.663 14.470 1.00 71.11 O
ATOM 11 C2' A A 85 31.659 166.233 16.470 1.00 68.96 C
ATOM 12 O2' A A 85 30.698 167.111 15.913 1.00 69.34 O
ATOM 13 C1' A A 85 31.394 164.774 16.097 1.00 68.44 C
ATOM 14 N9 A A 85 30.415 164.094 16.948 1.00 69.26 N
ATOM 15 C8 A A 85 29.229 163.525 16.551 1.00 69.22 C
ATOM 16 N7 A A 85 28.535 163.006 17.533 1.00 69.61 N
ATOM 17 C5 A A 85 29.317 163.244 18.656 1.00 70.56 C
ATOM 18 C6 A A 85 29.131 162.950 20.020 1.00 70.79 C
ATOM 19 N6 A A 85 28.055 162.324 20.504 1.00 71.09 N
ATOM 20 N1 A A 85 30.100 163.330 20.882 1.00 70.65 N
ATOM 21 C2 A A 85 31.178 163.959 20.397 1.00 69.99 C
ATOM 22 N3 A A 85 31.466 164.292 19.141 1.00 70.08 N
ATOM 23 C4 A A 85 30.483 163.905 18.309 1.00 70.10 C
ATOM 24 P A A 86 33.673 167.909 13.794 1.00 71.57 P
ATOM 25 OP1 A A 86 33.631 169.075 14.726 1.00 71.06 O
ATOM 26 OP2 A A 86 33.081 168.032 12.436 1.00 72.95 O
ATOM 27 O5' A A 86 35.184 167.417 13.644 1.00 67.78 O
TER
ATOM 1 O3' A B 86 38.547 164.591 13.673 1.00 64.80 O
ATOM 2 P G B 87 38.269 163.014 13.774 1.00 64.65 P
ATOM 3 OP1 G B 87 39.524 162.318 14.164 1.00 63.08 O
ATOM 4 OP2 G B 87 37.571 162.614 12.529 1.00 65.00 O
ATOM 5 O5' G B 87 37.215 162.890 14.962 1.00 65.49 O
ATOM 6 C5' G B 87 37.610 163.059 16.338 1.00 63.80 C
ATOM 7 C4' G B 87 37.039 161.939 17.173 1.00 61.95 C
ATOM 8 O4' G B 87 35.588 161.996 17.105 1.00 62.25 O
ATOM 9 C3' G B 87 37.422 160.543 16.702 1.00 60.86 C
ATOM 10 O3' G B 87 37.460 159.672 17.819 1.00 60.09 O
ATOM 11 C2' G B 87 36.270 160.180 15.774 1.00 60.99 C
ATOM 12 O2' G B 87 36.099 158.787 15.608 1.00 59.66 O
ATOM 13 C1' G B 87 35.085 160.820 16.499 1.00 62.45 C
ATOM 14 N9 G B 87 33.995 161.207 15.606 1.00 63.82 N
ATOM 15 C8 G B 87 34.104 161.932 14.443 1.00 64.33 C
ATOM 16 N7 G B 87 32.963 162.109 13.839 1.00 64.91 N
ATOM 17 C5 G B 87 32.039 161.468 14.651 1.00 65.02 C
ATOM 18 C6 G B 87 30.637 161.318 14.502 1.00 65.60 C
ATOM 19 O6 G B 87 29.910 161.729 13.588 1.00 66.49 O
ATOM 20 N1 G B 87 30.086 160.603 15.556 1.00 65.37 N
ATOM 21 C2 G B 87 30.789 160.093 16.614 1.00 65.31 C
ATOM 22 N2 G B 87 30.068 159.430 17.523 1.00 66.56 N
ATOM 23 N3 G B 87 32.098 160.220 16.767 1.00 64.66 N
ATOM 24 C4 G B 87 32.656 160.914 15.753 1.00 64.39 C
ATOM 25 P A B 88 38.800 158.857 18.147 1.00 60.01 P
ATOM 26 OP1 A B 88 39.866 159.265 17.190 1.00 60.68 O
ATOM 27 OP2 A B 88 38.439 157.429 18.263 1.00 59.98 O
ATOM 28 O5' A B 88 39.195 159.386 19.593 1.00 58.87 O
TER
Atoms:
OP1: (37.835,167.039,17.929)
OP2: (35.539,167.506,18.996)
C3': (33.043,166.438,15.869)
C1': (31.394,164.774,16.097)
C5': (34.593,165.040,17.342)
O4': (32.639,164.118,16.227)
C8: (29.229,163.525,16.551)
O2': (30.698,167.111,15.913)
C6: (29.131,162.950,20.020)
C5: (29.317,163.244,18.656)
C4: (30.483,163.905,18.309)
P: (36.503,166.553,18.375)
C4': (33.714,165.092,16.116)
C2': (31.659,166.233,16.470)
C2: (31.178,163.959,20.397)
N1: (30.100,163.330,20.882)
N3: (31.466,164.292,19.141)
N6: (28.055,162.324,20.504)
N7: (28.535,163.006,17.533)
N9: (30.415,164.094,16.948)
O5': (35.766,165.861,17.143)
O3': (32.919,166.663,14.470)
OP2: (35.539,167.506,18.996)
C3': (33.043,166.438,15.869)
C1': (31.394,164.774,16.097)
C5': (34.593,165.040,17.342)
O4': (32.639,164.118,16.227)
C8: (29.229,163.525,16.551)
O2': (30.698,167.111,15.913)
C6: (29.131,162.950,20.020)
C5: (29.317,163.244,18.656)
C4: (30.483,163.905,18.309)
P: (36.503,166.553,18.375)
C4': (33.714,165.092,16.116)
C2': (31.659,166.233,16.470)
C2: (31.178,163.959,20.397)
N1: (30.100,163.330,20.882)
N3: (31.466,164.292,19.141)
N6: (28.055,162.324,20.504)
N7: (28.535,163.006,17.533)
N9: (30.415,164.094,16.948)
O5': (35.766,165.861,17.143)
O3': (32.919,166.663,14.470)
OP1: (39.524,162.318,14.164)
OP2: (37.571,162.614,12.529)
C3': (37.422,160.543,16.702)
C1': (35.085,160.820,16.499)
C5': (37.610,163.059,16.338)
O6: (29.910,161.729,13.588)
O4': (35.588,161.996,17.105)
C8: (34.104,161.932,14.443)
C2: (30.789,160.093,16.614)
C6: (30.637,161.318,14.502)
C5: (32.039,161.468,14.651)
C4: (32.656,160.914,15.753)
P: (38.269,163.014,13.774)
C4': (37.039,161.939,17.173)
C2': (36.270,160.180,15.774)
O2': (36.099,158.787,15.608)
N1: (30.086,160.603,15.556)
N2: (30.068,159.430,17.523)
N3: (32.098,160.220,16.767)
N7: (32.963,162.109,13.839)
N9: (33.995,161.207,15.606)
O5': (37.215,162.890,14.962)
O3': (37.460,159.672,17.819)
OP2: (37.571,162.614,12.529)
C3': (37.422,160.543,16.702)
C1': (35.085,160.820,16.499)
C5': (37.610,163.059,16.338)
O6: (29.910,161.729,13.588)
O4': (35.588,161.996,17.105)
C8: (34.104,161.932,14.443)
C2: (30.789,160.093,16.614)
C6: (30.637,161.318,14.502)
C5: (32.039,161.468,14.651)
C4: (32.656,160.914,15.753)
P: (38.269,163.014,13.774)
C4': (37.039,161.939,17.173)
C2': (36.270,160.180,15.774)
O2': (36.099,158.787,15.608)
N1: (30.086,160.603,15.556)
N2: (30.068,159.430,17.523)
N3: (32.098,160.220,16.767)
N7: (32.963,162.109,13.839)
N9: (33.995,161.207,15.606)
O5': (37.215,162.890,14.962)
O3': (37.460,159.672,17.819)
Image (generated by PyMOL):