ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GX5:A9:A10

Extra

PDB:
ATOM 1 O3' A A 8 20.659 -12.727 17.703 1.00 75.91 O
ATOM 2 P A A 9 21.724 -12.524 18.874 1.00 47.12 P
ATOM 3 OP1 A A 9 22.490 -13.777 18.982 1.00 54.35 O
ATOM 4 OP2 A A 9 21.037 -11.983 20.065 1.00 50.73 O
ATOM 5 O5' A A 9 22.688 -11.400 18.274 1.00 46.73 O
ATOM 6 C5' A A 9 24.068 -11.380 18.639 1.00 44.21 C
ATOM 7 C4' A A 9 24.791 -10.218 17.980 1.00 43.07 C
ATOM 8 O4' A A 9 24.711 -10.310 16.533 1.00 44.12 O
ATOM 9 C3' A A 9 24.217 -8.857 18.301 1.00 40.91 C
ATOM 10 O3' A A 9 24.796 -8.399 19.495 1.00 42.38 O
ATOM 11 C2' A A 9 24.699 -8.044 17.107 1.00 46.25 C
ATOM 12 O2' A A 9 26.076 -7.726 17.165 1.00 48.24 O
ATOM 13 C1' A A 9 24.478 -9.035 15.976 1.00 46.51 C
ATOM 14 N9 A A 9 23.133 -9.005 15.404 1.00 52.08 N
ATOM 15 C8 A A 9 22.110 -9.886 15.642 1.00 54.32 C
ATOM 16 N7 A A 9 21.006 -9.608 14.986 1.00 53.61 N
ATOM 17 C5 A A 9 21.329 -8.466 14.267 1.00 52.33 C
ATOM 18 C6 A A 9 20.592 -7.668 13.368 1.00 54.39 C
ATOM 19 N6 A A 9 19.324 -7.925 13.036 1.00 55.54 N
ATOM 20 N1 A A 9 21.204 -6.596 12.822 1.00 52.73 N
ATOM 21 C2 A A 9 22.476 -6.347 13.155 1.00 51.34 C
ATOM 22 N3 A A 9 23.267 -7.023 13.987 1.00 52.01 N
ATOM 23 C4 A A 9 22.631 -8.080 14.514 1.00 51.59 C
ATOM 24 P G A 10 23.868 -7.651 20.565 1.00 57.01 P
ATOM 25 OP1 G A 10 24.652 -7.495 21.809 1.00 62.06 O
ATOM 26 OP2 G A 10 22.562 -8.343 20.606 1.00 54.93 O
ATOM 27 O5' G A 10 23.690 -6.198 19.915 1.00 53.01 O
TER

ATOM 1 O3' A B 9 24.796 -8.399 19.495 1.00 42.38 O
ATOM 2 P G B 10 23.868 -7.651 20.565 1.00 57.01 P
ATOM 3 OP1 G B 10 24.652 -7.495 21.809 1.00 62.06 O
ATOM 4 OP2 G B 10 22.562 -8.343 20.606 1.00 54.93 O
ATOM 5 O5' G B 10 23.690 -6.198 19.915 1.00 53.01 O
ATOM 6 C5' G B 10 24.772 -5.598 19.189 1.00 52.61 C
ATOM 7 C4' G B 10 24.317 -4.325 18.491 1.00 48.43 C
ATOM 8 O4' G B 10 23.700 -4.669 17.227 1.00 45.21 O
ATOM 9 C3' G B 10 23.240 -3.558 19.248 1.00 50.35 C
ATOM 10 O3' G B 10 23.820 -2.635 20.179 1.00 49.99 O
ATOM 11 C2' G B 10 22.473 -2.866 18.122 1.00 50.54 C
ATOM 12 O2' G B 10 23.121 -1.698 17.657 1.00 54.99 O
ATOM 13 C1' G B 10 22.526 -3.904 17.011 1.00 44.78 C
ATOM 14 N9 G B 10 21.421 -4.854 16.926 1.00 43.51 N
ATOM 15 C8 G B 10 21.291 -6.002 17.655 1.00 43.96 C
ATOM 16 N7 G B 10 20.228 -6.696 17.367 1.00 43.98 N
ATOM 17 C5 G B 10 19.607 -5.961 16.369 1.00 45.22 C
ATOM 18 C6 G B 10 18.402 -6.221 15.661 1.00 41.29 C
ATOM 19 O6 G B 10 17.631 -7.181 15.782 1.00 40.26 O
ATOM 20 N1 G B 10 18.122 -5.230 14.729 1.00 39.91 N
ATOM 21 C2 G B 10 18.910 -4.129 14.511 1.00 41.08 C
ATOM 22 N2 G B 10 18.474 -3.286 13.571 1.00 41.60 N
ATOM 23 N3 G B 10 20.040 -3.870 15.162 1.00 45.64 N
ATOM 24 C4 G B 10 20.331 -4.826 16.081 1.00 45.28 C
ATOM 25 P A B 11 23.242 -2.612 21.675 1.00 69.09 P
ATOM 26 OP1 A B 11 24.359 -2.257 22.586 1.00 71.26 O
ATOM 27 OP2 A B 11 22.459 -3.857 21.879 1.00 61.41 O
ATOM 28 O5' A B 11 22.228 -1.375 21.630 1.00 57.60 O
TER

Atoms:
OP1: (22.490,-13.777,18.982)
OP2: (21.037,-11.983,20.065)
C3': (24.217,-8.857,18.301)
C1': (24.478,-9.035,15.976)
C5': (24.068,-11.380,18.639)
O4': (24.711,-10.310,16.533)
C8: (22.110,-9.886,15.642)
O2': (26.076,-7.726,17.165)
C6: (20.592,-7.668,13.368)
C5: (21.329,-8.466,14.267)
C4: (22.631,-8.080,14.514)
P: (21.724,-12.524,18.874)
C4': (24.791,-10.218,17.980)
C2': (24.699,-8.044,17.107)
C2: (22.476,-6.347,13.155)
N1: (21.204,-6.596,12.822)
N3: (23.267,-7.023,13.987)
N6: (19.324,-7.925,13.036)
N7: (21.006,-9.608,14.986)
N9: (23.133,-9.005,15.404)
O5': (22.688,-11.400,18.274)
O3': (24.796,-8.399,19.495)
OP1: (24.652,-7.495,21.809)
OP2: (22.562,-8.343,20.606)
C3': (23.240,-3.558,19.248)
C1': (22.526,-3.904,17.011)
C5': (24.772,-5.598,19.189)
O6: (17.631,-7.181,15.782)
O4': (23.700,-4.669,17.227)
C8: (21.291,-6.002,17.655)
C2: (18.910,-4.129,14.511)
C6: (18.402,-6.221,15.661)
C5: (19.607,-5.961,16.369)
C4: (20.331,-4.826,16.081)
P: (23.868,-7.651,20.565)
C4': (24.317,-4.325,18.491)
C2': (22.473,-2.866,18.122)
O2': (23.121,-1.698,17.657)
N1: (18.122,-5.230,14.729)
N2: (18.474,-3.286,13.571)
N3: (20.040,-3.870,15.162)
N7: (20.228,-6.696,17.367)
N9: (21.421,-4.854,16.926)
O5': (23.690,-6.198,19.915)
O3': (23.820,-2.635,20.179)
Image (generated by PyMOL):
PyMOL image
show in jmol