Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0481:0480
Extra
PDB:
ATOM 1 O3' C A 480 20.916 179.419 72.664 1.00 53.69 O
ATOM 2 P U A 481 22.390 179.887 73.079 1.00 55.62 P
ATOM 3 OP1 U A 481 22.220 180.907 74.153 1.00 56.45 O
ATOM 4 OP2 U A 481 23.138 180.234 71.840 1.00 54.14 O
ATOM 5 O5' U A 481 23.046 178.581 73.723 1.00 54.33 O
ATOM 6 C5' U A 481 22.537 178.024 74.959 1.00 52.40 C
ATOM 7 C4' U A 481 23.358 176.824 75.375 1.00 51.00 C
ATOM 8 O4' U A 481 23.238 175.785 74.375 1.00 50.61 O
ATOM 9 C3' U A 481 24.852 177.055 75.495 1.00 51.43 C
ATOM 10 O3' U A 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 11 C2' U A 481 25.421 175.653 75.315 1.00 50.33 C
ATOM 12 O2' U A 481 25.343 174.874 76.487 1.00 53.06 O
ATOM 13 C1' U A 481 24.453 175.064 74.289 1.00 49.32 C
ATOM 14 N1 U A 481 24.926 175.101 72.898 1.00 48.36 N
ATOM 15 C2 U A 481 25.757 174.078 72.472 1.00 47.52 C
ATOM 16 O2 U A 481 26.127 173.176 73.199 1.00 47.22 O
ATOM 17 N3 U A 481 26.139 174.154 71.160 1.00 46.99 N
ATOM 18 C4 U A 481 25.789 175.125 70.252 1.00 47.11 C
ATOM 19 O4 U A 481 26.205 175.048 69.099 1.00 49.71 O
ATOM 20 C5 U A 481 24.943 176.150 70.768 1.00 46.72 C
ATOM 21 C6 U A 481 24.552 176.106 72.040 1.00 47.06 C
ATOM 22 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 23 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 24 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 25 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
TER
ATOM 1 O3' C B 479 19.379 179.789 66.816 1.00 52.94 O
ATOM 2 P C B 480 20.718 180.089 67.645 1.00 54.11 P
ATOM 3 OP1 C B 480 20.700 181.517 68.039 1.00 55.39 O
ATOM 4 OP2 C B 480 21.874 179.554 66.875 1.00 54.29 O
ATOM 5 O5' C B 480 20.531 179.230 68.969 1.00 53.73 O
ATOM 6 C5' C B 480 19.420 179.474 69.845 1.00 53.02 C
ATOM 7 C4' C B 480 19.435 178.492 70.985 1.00 53.72 C
ATOM 8 O4' C B 480 19.212 177.152 70.477 1.00 54.53 O
ATOM 9 C3' C B 480 20.759 178.386 71.714 1.00 52.85 C
ATOM 10 O3' C B 480 20.916 179.419 72.664 1.00 53.69 O
ATOM 11 C2' C B 480 20.666 177.008 72.347 1.00 53.03 C
ATOM 12 O2' C B 480 19.859 176.967 73.508 1.00 52.66 O
ATOM 13 C1' C B 480 19.980 176.226 71.230 1.00 53.25 C
ATOM 14 N1 C B 480 20.943 175.565 70.330 1.00 52.99 N
ATOM 15 C2 C B 480 21.591 174.412 70.780 1.00 52.32 C
ATOM 16 O2 C B 480 21.348 173.993 71.926 1.00 53.20 O
ATOM 17 N3 C B 480 22.465 173.783 69.961 1.00 51.32 N
ATOM 18 C4 C B 480 22.700 174.262 68.742 1.00 50.62 C
ATOM 19 N4 C B 480 23.555 173.599 67.968 1.00 49.78 N
ATOM 20 C5 C B 480 22.064 175.441 68.261 1.00 52.06 C
ATOM 21 C6 C B 480 21.201 176.056 69.079 1.00 52.32 C
ATOM 22 P U B 481 22.390 179.887 73.079 1.00 55.62 P
ATOM 23 OP1 U B 481 22.220 180.907 74.153 1.00 56.45 O
ATOM 24 OP2 U B 481 23.138 180.234 71.840 1.00 54.14 O
ATOM 25 O5' U B 481 23.046 178.581 73.723 1.00 54.33 O
TER
ATOM 2 P U A 481 22.390 179.887 73.079 1.00 55.62 P
ATOM 3 OP1 U A 481 22.220 180.907 74.153 1.00 56.45 O
ATOM 4 OP2 U A 481 23.138 180.234 71.840 1.00 54.14 O
ATOM 5 O5' U A 481 23.046 178.581 73.723 1.00 54.33 O
ATOM 6 C5' U A 481 22.537 178.024 74.959 1.00 52.40 C
ATOM 7 C4' U A 481 23.358 176.824 75.375 1.00 51.00 C
ATOM 8 O4' U A 481 23.238 175.785 74.375 1.00 50.61 O
ATOM 9 C3' U A 481 24.852 177.055 75.495 1.00 51.43 C
ATOM 10 O3' U A 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 11 C2' U A 481 25.421 175.653 75.315 1.00 50.33 C
ATOM 12 O2' U A 481 25.343 174.874 76.487 1.00 53.06 O
ATOM 13 C1' U A 481 24.453 175.064 74.289 1.00 49.32 C
ATOM 14 N1 U A 481 24.926 175.101 72.898 1.00 48.36 N
ATOM 15 C2 U A 481 25.757 174.078 72.472 1.00 47.52 C
ATOM 16 O2 U A 481 26.127 173.176 73.199 1.00 47.22 O
ATOM 17 N3 U A 481 26.139 174.154 71.160 1.00 46.99 N
ATOM 18 C4 U A 481 25.789 175.125 70.252 1.00 47.11 C
ATOM 19 O4 U A 481 26.205 175.048 69.099 1.00 49.71 O
ATOM 20 C5 U A 481 24.943 176.150 70.768 1.00 46.72 C
ATOM 21 C6 U A 481 24.552 176.106 72.040 1.00 47.06 C
ATOM 22 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 23 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 24 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 25 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
TER
ATOM 1 O3' C B 479 19.379 179.789 66.816 1.00 52.94 O
ATOM 2 P C B 480 20.718 180.089 67.645 1.00 54.11 P
ATOM 3 OP1 C B 480 20.700 181.517 68.039 1.00 55.39 O
ATOM 4 OP2 C B 480 21.874 179.554 66.875 1.00 54.29 O
ATOM 5 O5' C B 480 20.531 179.230 68.969 1.00 53.73 O
ATOM 6 C5' C B 480 19.420 179.474 69.845 1.00 53.02 C
ATOM 7 C4' C B 480 19.435 178.492 70.985 1.00 53.72 C
ATOM 8 O4' C B 480 19.212 177.152 70.477 1.00 54.53 O
ATOM 9 C3' C B 480 20.759 178.386 71.714 1.00 52.85 C
ATOM 10 O3' C B 480 20.916 179.419 72.664 1.00 53.69 O
ATOM 11 C2' C B 480 20.666 177.008 72.347 1.00 53.03 C
ATOM 12 O2' C B 480 19.859 176.967 73.508 1.00 52.66 O
ATOM 13 C1' C B 480 19.980 176.226 71.230 1.00 53.25 C
ATOM 14 N1 C B 480 20.943 175.565 70.330 1.00 52.99 N
ATOM 15 C2 C B 480 21.591 174.412 70.780 1.00 52.32 C
ATOM 16 O2 C B 480 21.348 173.993 71.926 1.00 53.20 O
ATOM 17 N3 C B 480 22.465 173.783 69.961 1.00 51.32 N
ATOM 18 C4 C B 480 22.700 174.262 68.742 1.00 50.62 C
ATOM 19 N4 C B 480 23.555 173.599 67.968 1.00 49.78 N
ATOM 20 C5 C B 480 22.064 175.441 68.261 1.00 52.06 C
ATOM 21 C6 C B 480 21.201 176.056 69.079 1.00 52.32 C
ATOM 22 P U B 481 22.390 179.887 73.079 1.00 55.62 P
ATOM 23 OP1 U B 481 22.220 180.907 74.153 1.00 56.45 O
ATOM 24 OP2 U B 481 23.138 180.234 71.840 1.00 54.14 O
ATOM 25 O5' U B 481 23.046 178.581 73.723 1.00 54.33 O
TER
Atoms:
C4: (25.789,175.125,70.252)
N3: (26.139,174.154,71.160)
OP1: (22.220,180.907,74.153)
OP2: (23.138,180.234,71.840)
C2: (25.757,174.078,72.472)
C1': (24.453,175.064,74.289)
C3': (24.852,177.055,75.495)
O5': (23.046,178.581,73.723)
O4': (23.238,175.785,74.375)
C5': (22.537,178.024,74.959)
P: (22.390,179.887,73.079)
C4': (23.358,176.824,75.375)
C2': (25.421,175.653,75.315)
O2': (25.343,174.874,76.487)
N1: (24.926,175.101,72.898)
O4: (26.205,175.048,69.099)
O2: (26.127,173.176,73.199)
C6: (24.552,176.106,72.040)
C5: (24.943,176.150,70.768)
O3': (25.179,177.609,76.765)
N3: (26.139,174.154,71.160)
OP1: (22.220,180.907,74.153)
OP2: (23.138,180.234,71.840)
C2: (25.757,174.078,72.472)
C1': (24.453,175.064,74.289)
C3': (24.852,177.055,75.495)
O5': (23.046,178.581,73.723)
O4': (23.238,175.785,74.375)
C5': (22.537,178.024,74.959)
P: (22.390,179.887,73.079)
C4': (23.358,176.824,75.375)
C2': (25.421,175.653,75.315)
O2': (25.343,174.874,76.487)
N1: (24.926,175.101,72.898)
O4: (26.205,175.048,69.099)
O2: (26.127,173.176,73.199)
C6: (24.552,176.106,72.040)
C5: (24.943,176.150,70.768)
O3': (25.179,177.609,76.765)
C2: (21.591,174.412,70.780)
OP1: (20.700,181.517,68.039)
OP2: (21.874,179.554,66.875)
C4: (22.700,174.262,68.742)
O5': (20.531,179.230,68.969)
C3': (20.759,178.386,71.714)
C1': (19.980,176.226,71.230)
O4': (19.212,177.152,70.477)
C5': (19.420,179.474,69.845)
P: (20.718,180.089,67.645)
O2: (21.348,173.993,71.926)
C4': (19.435,178.492,70.985)
C2': (20.666,177.008,72.347)
O2': (19.859,176.967,73.508)
N1: (20.943,175.565,70.330)
N3: (22.465,173.783,69.961)
N4: (23.555,173.599,67.968)
C6: (21.201,176.056,69.079)
C5: (22.064,175.441,68.261)
O3': (20.916,179.419,72.664)
OP1: (20.700,181.517,68.039)
OP2: (21.874,179.554,66.875)
C4: (22.700,174.262,68.742)
O5': (20.531,179.230,68.969)
C3': (20.759,178.386,71.714)
C1': (19.980,176.226,71.230)
O4': (19.212,177.152,70.477)
C5': (19.420,179.474,69.845)
P: (20.718,180.089,67.645)
O2: (21.348,173.993,71.926)
C4': (19.435,178.492,70.985)
C2': (20.666,177.008,72.347)
O2': (19.859,176.967,73.508)
N1: (20.943,175.565,70.330)
N3: (22.465,173.783,69.961)
N4: (23.555,173.599,67.968)
C6: (21.201,176.056,69.079)
C5: (22.064,175.441,68.261)
O3': (20.916,179.419,72.664)
Image (generated by PyMOL):