ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G8T:P115:P116

Extra

PDB:
ATOM 1 O3' U A 114 -10.161 66.433 82.508 1.00 78.33 O
ATOM 2 P A A 115 -11.111 67.590 83.078 1.00 78.56 P
ATOM 3 OP1 A A 115 -10.664 68.862 82.463 1.00 78.75 O
ATOM 4 OP2 A A 115 -11.157 67.472 84.553 1.00 78.42 O
ATOM 5 O5' A A 115 -12.557 67.214 82.498 1.00 78.48 O
ATOM 6 C5' A A 115 -12.919 67.565 81.165 1.00 78.44 C
ATOM 7 C4' A A 115 -14.219 66.910 80.739 1.00 78.44 C
ATOM 8 O4' A A 115 -14.258 65.516 81.137 1.00 78.45 O
ATOM 9 C3' A A 115 -15.470 67.476 81.386 1.00 78.52 C
ATOM 10 O3' A A 115 -15.834 68.717 80.809 1.00 78.76 O
ATOM 11 C2' A A 115 -16.470 66.365 81.084 1.00 78.38 C
ATOM 12 O2' A A 115 -16.947 66.366 79.752 1.00 78.49 O
ATOM 13 C1' A A 115 -15.608 65.133 81.354 1.00 78.27 C
ATOM 14 N9 A A 115 -15.771 64.651 82.724 1.00 78.04 N
ATOM 15 C8 A A 115 -14.887 64.785 83.759 1.00 78.07 C
ATOM 16 N7 A A 115 -15.302 64.260 84.886 1.00 78.03 N
ATOM 17 C5 A A 115 -16.549 63.748 84.572 1.00 77.91 C
ATOM 18 C6 A A 115 -17.516 63.060 85.336 1.00 77.80 C
ATOM 19 N6 A A 115 -17.351 62.767 86.628 1.00 77.61 N
ATOM 20 N1 A A 115 -18.660 62.683 84.720 1.00 77.90 N
ATOM 21 C2 A A 115 -18.825 62.977 83.421 1.00 78.00 C
ATOM 22 N3 A A 115 -17.988 63.621 82.603 1.00 77.98 N
ATOM 23 C4 A A 115 -16.857 63.981 83.243 1.00 77.96 C
ATOM 24 P G A 116 -16.609 69.796 81.699 1.00 79.09 P
ATOM 25 OP1 G A 116 -16.581 71.070 80.944 1.00 79.23 O
ATOM 26 OP2 G A 116 -16.070 69.758 83.078 1.00 78.96 O
ATOM 27 O5' G A 116 -18.109 69.233 81.729 1.00 79.01 O
TER

ATOM 1 O3' A B 115 -15.834 68.717 80.809 1.00 78.76 O
ATOM 2 P G B 116 -16.609 69.796 81.699 1.00 79.09 P
ATOM 3 OP1 G B 116 -16.581 71.070 80.944 1.00 79.23 O
ATOM 4 OP2 G B 116 -16.070 69.758 83.078 1.00 78.96 O
ATOM 5 O5' G B 116 -18.109 69.233 81.729 1.00 79.01 O
ATOM 6 C5' G B 116 -19.096 69.746 80.845 1.00 79.43 C
ATOM 7 C4' G B 116 -20.189 68.730 80.573 1.00 79.83 C
ATOM 8 O4' G B 116 -19.718 67.386 80.845 1.00 79.88 O
ATOM 9 C3' G B 116 -21.424 68.886 81.444 1.00 80.27 C
ATOM 10 O3' G B 116 -22.297 69.853 80.886 1.00 81.14 O
ATOM 11 C2' G B 116 -22.012 67.479 81.411 1.00 80.10 C
ATOM 12 O2' G B 116 -22.734 67.191 80.229 1.00 80.17 O
ATOM 13 C1' G B 116 -20.742 66.633 81.473 1.00 80.02 C
ATOM 14 N9 G B 116 -20.329 66.300 82.840 1.00 79.92 N
ATOM 15 C8 G B 116 -19.140 66.635 83.444 1.00 79.92 C
ATOM 16 N7 G B 116 -19.034 66.212 84.671 1.00 79.84 N
ATOM 17 C5 G B 116 -20.233 65.552 84.904 1.00 79.74 C
ATOM 18 C6 G B 116 -20.691 64.881 86.065 1.00 79.63 C
ATOM 19 O6 G B 116 -20.105 64.743 87.148 1.00 79.60 O
ATOM 20 N1 G B 116 -21.965 64.340 85.887 1.00 79.51 N
ATOM 21 C2 G B 116 -22.705 64.434 84.730 1.00 79.40 C
ATOM 22 N2 G B 116 -23.912 63.854 84.742 1.00 79.27 N
ATOM 23 N3 G B 116 -22.284 65.057 83.635 1.00 79.57 N
ATOM 24 C4 G B 116 -21.043 65.593 83.787 1.00 79.77 C
ATOM 25 P U B 117 -22.873 71.028 81.807 1.00 81.93 P
ATOM 26 OP1 U B 117 -23.473 72.045 80.915 1.00 82.20 O
ATOM 27 OP2 U B 117 -21.819 71.423 82.769 1.00 81.87 O
ATOM 28 O5' U B 117 -24.055 70.317 82.615 1.00 82.78 O
TER

Atoms:
OP1: (-10.664,68.862,82.463)
OP2: (-11.157,67.472,84.553)
C3': (-15.470,67.476,81.386)
C1': (-15.608,65.133,81.354)
C5': (-12.919,67.565,81.165)
O4': (-14.258,65.516,81.137)
C8: (-14.887,64.785,83.759)
O2': (-16.947,66.366,79.752)
C6: (-17.516,63.060,85.336)
C5: (-16.549,63.748,84.572)
C4: (-16.857,63.981,83.243)
P: (-11.111,67.590,83.078)
C4': (-14.219,66.910,80.739)
C2': (-16.470,66.365,81.084)
C2: (-18.825,62.977,83.421)
N1: (-18.660,62.683,84.720)
N3: (-17.988,63.621,82.603)
N6: (-17.351,62.767,86.628)
N7: (-15.302,64.260,84.886)
N9: (-15.771,64.651,82.724)
O5': (-12.557,67.214,82.498)
O3': (-15.834,68.717,80.809)
OP1: (-16.581,71.070,80.944)
OP2: (-16.070,69.758,83.078)
C3': (-21.424,68.886,81.444)
C1': (-20.742,66.633,81.473)
C5': (-19.096,69.746,80.845)
O6: (-20.105,64.743,87.148)
O4': (-19.718,67.386,80.845)
C8: (-19.140,66.635,83.444)
C2: (-22.705,64.434,84.730)
C6: (-20.691,64.881,86.065)
C5: (-20.233,65.552,84.904)
C4: (-21.043,65.593,83.787)
P: (-16.609,69.796,81.699)
C4': (-20.189,68.730,80.573)
C2': (-22.012,67.479,81.411)
O2': (-22.734,67.191,80.229)
N1: (-21.965,64.340,85.887)
N2: (-23.912,63.854,84.742)
N3: (-22.284,65.057,83.635)
N7: (-19.034,66.212,84.671)
N9: (-20.329,66.300,82.840)
O5': (-18.109,69.233,81.729)
O3': (-22.297,69.853,80.886)
Image (generated by PyMOL):
PyMOL image
show in jmol