Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E6:E7
Extra
PDB:
ATOM 1 O3' G A 5 8.240 27.529 129.842 1.00 87.31 O
ATOM 2 P A A 6 6.948 27.841 128.926 1.00 89.13 P
ATOM 3 OP1 A A 6 5.934 28.503 129.784 1.00 91.76 O
ATOM 4 OP2 A A 6 6.590 26.600 128.192 1.00 88.26 O
ATOM 5 O5' A A 6 7.459 28.900 127.849 1.00 80.21 O
ATOM 6 C5' A A 6 7.777 30.238 128.223 1.00 74.47 C
ATOM 7 C4' A A 6 8.373 30.982 127.048 1.00 80.67 C
ATOM 8 O4' A A 6 9.596 30.315 126.630 1.00 77.28 O
ATOM 9 C3' A A 6 7.519 31.017 125.789 1.00 79.82 C
ATOM 10 O3' A A 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 11 C2' A A 6 8.568 31.237 124.708 1.00 75.99 C
ATOM 12 O2' A A 6 9.003 32.580 124.639 1.00 75.87 O
ATOM 13 C1' A A 6 9.704 30.349 125.215 1.00 77.12 C
ATOM 14 N9 A A 6 9.597 28.977 124.717 1.00 77.11 N
ATOM 15 C8 A A 6 9.073 27.885 125.366 1.00 77.44 C
ATOM 16 N7 A A 6 9.092 26.785 124.654 1.00 75.60 N
ATOM 17 C5 A A 6 9.672 27.175 123.456 1.00 75.41 C
ATOM 18 C6 A A 6 9.978 26.469 122.280 1.00 75.43 C
ATOM 19 N6 A A 6 9.729 25.167 122.112 1.00 74.58 N
ATOM 20 N1 A A 6 10.556 27.153 121.270 1.00 75.71 N
ATOM 21 C2 A A 6 10.807 28.457 121.440 1.00 75.64 C
ATOM 22 N3 A A 6 10.568 29.231 122.497 1.00 76.29 N
ATOM 23 C4 A A 6 9.993 28.521 123.482 1.00 75.50 C
ATOM 24 P G A 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 25 OP1 G A 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 26 OP2 G A 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 27 O5' G A 7 5.352 31.745 123.650 1.00 80.79 O
TER
ATOM 1 O3' A B 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 2 P G B 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 3 OP1 G B 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 4 OP2 G B 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 5 O5' G B 7 5.352 31.745 123.650 1.00 80.79 O
ATOM 6 C5' G B 7 6.050 32.762 122.935 1.00 86.37 C
ATOM 7 C4' G B 7 6.571 32.211 121.630 1.00 89.77 C
ATOM 8 O4' G B 7 7.482 31.118 121.914 1.00 91.66 O
ATOM 9 C3' G B 7 5.511 31.611 120.720 1.00 89.88 C
ATOM 10 O3' G B 7 4.964 32.625 119.883 1.00 90.59 O
ATOM 11 C2' G B 7 6.304 30.581 119.923 1.00 87.50 C
ATOM 12 O2' G B 7 7.026 31.153 118.852 1.00 91.11 O
ATOM 13 C1' G B 7 7.289 30.075 120.977 1.00 85.54 C
ATOM 14 N9 G B 7 6.850 28.890 121.708 1.00 82.32 N
ATOM 15 C8 G B 7 6.296 28.850 122.964 1.00 82.63 C
ATOM 16 N7 G B 7 6.033 27.638 123.372 1.00 81.90 N
ATOM 17 C5 G B 7 6.433 26.829 122.317 1.00 82.73 C
ATOM 18 C6 G B 7 6.395 25.418 122.178 1.00 82.90 C
ATOM 19 O6 G B 7 5.986 24.573 122.986 1.00 83.15 O
ATOM 20 N1 G B 7 6.898 25.014 120.945 1.00 81.81 N
ATOM 21 C2 G B 7 7.377 25.856 119.970 1.00 82.09 C
ATOM 22 N2 G B 7 7.822 25.273 118.843 1.00 80.96 N
ATOM 23 N3 G B 7 7.418 27.172 120.090 1.00 82.18 N
ATOM 24 C4 G B 7 6.934 27.587 121.280 1.00 81.88 C
ATOM 25 P A B 8 3.590 32.356 119.097 1.00 84.71 P
ATOM 26 OP1 A B 8 2.729 33.557 119.246 1.00 84.19 O
ATOM 27 OP2 A B 8 3.086 31.029 119.542 1.00 77.42 O
ATOM 28 O5' A B 8 4.037 32.257 117.570 1.00 78.34 O
TER
ATOM 2 P A A 6 6.948 27.841 128.926 1.00 89.13 P
ATOM 3 OP1 A A 6 5.934 28.503 129.784 1.00 91.76 O
ATOM 4 OP2 A A 6 6.590 26.600 128.192 1.00 88.26 O
ATOM 5 O5' A A 6 7.459 28.900 127.849 1.00 80.21 O
ATOM 6 C5' A A 6 7.777 30.238 128.223 1.00 74.47 C
ATOM 7 C4' A A 6 8.373 30.982 127.048 1.00 80.67 C
ATOM 8 O4' A A 6 9.596 30.315 126.630 1.00 77.28 O
ATOM 9 C3' A A 6 7.519 31.017 125.789 1.00 79.82 C
ATOM 10 O3' A A 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 11 C2' A A 6 8.568 31.237 124.708 1.00 75.99 C
ATOM 12 O2' A A 6 9.003 32.580 124.639 1.00 75.87 O
ATOM 13 C1' A A 6 9.704 30.349 125.215 1.00 77.12 C
ATOM 14 N9 A A 6 9.597 28.977 124.717 1.00 77.11 N
ATOM 15 C8 A A 6 9.073 27.885 125.366 1.00 77.44 C
ATOM 16 N7 A A 6 9.092 26.785 124.654 1.00 75.60 N
ATOM 17 C5 A A 6 9.672 27.175 123.456 1.00 75.41 C
ATOM 18 C6 A A 6 9.978 26.469 122.280 1.00 75.43 C
ATOM 19 N6 A A 6 9.729 25.167 122.112 1.00 74.58 N
ATOM 20 N1 A A 6 10.556 27.153 121.270 1.00 75.71 N
ATOM 21 C2 A A 6 10.807 28.457 121.440 1.00 75.64 C
ATOM 22 N3 A A 6 10.568 29.231 122.497 1.00 76.29 N
ATOM 23 C4 A A 6 9.993 28.521 123.482 1.00 75.50 C
ATOM 24 P G A 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 25 OP1 G A 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 26 OP2 G A 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 27 O5' G A 7 5.352 31.745 123.650 1.00 80.79 O
TER
ATOM 1 O3' A B 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 2 P G B 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 3 OP1 G B 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 4 OP2 G B 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 5 O5' G B 7 5.352 31.745 123.650 1.00 80.79 O
ATOM 6 C5' G B 7 6.050 32.762 122.935 1.00 86.37 C
ATOM 7 C4' G B 7 6.571 32.211 121.630 1.00 89.77 C
ATOM 8 O4' G B 7 7.482 31.118 121.914 1.00 91.66 O
ATOM 9 C3' G B 7 5.511 31.611 120.720 1.00 89.88 C
ATOM 10 O3' G B 7 4.964 32.625 119.883 1.00 90.59 O
ATOM 11 C2' G B 7 6.304 30.581 119.923 1.00 87.50 C
ATOM 12 O2' G B 7 7.026 31.153 118.852 1.00 91.11 O
ATOM 13 C1' G B 7 7.289 30.075 120.977 1.00 85.54 C
ATOM 14 N9 G B 7 6.850 28.890 121.708 1.00 82.32 N
ATOM 15 C8 G B 7 6.296 28.850 122.964 1.00 82.63 C
ATOM 16 N7 G B 7 6.033 27.638 123.372 1.00 81.90 N
ATOM 17 C5 G B 7 6.433 26.829 122.317 1.00 82.73 C
ATOM 18 C6 G B 7 6.395 25.418 122.178 1.00 82.90 C
ATOM 19 O6 G B 7 5.986 24.573 122.986 1.00 83.15 O
ATOM 20 N1 G B 7 6.898 25.014 120.945 1.00 81.81 N
ATOM 21 C2 G B 7 7.377 25.856 119.970 1.00 82.09 C
ATOM 22 N2 G B 7 7.822 25.273 118.843 1.00 80.96 N
ATOM 23 N3 G B 7 7.418 27.172 120.090 1.00 82.18 N
ATOM 24 C4 G B 7 6.934 27.587 121.280 1.00 81.88 C
ATOM 25 P A B 8 3.590 32.356 119.097 1.00 84.71 P
ATOM 26 OP1 A B 8 2.729 33.557 119.246 1.00 84.19 O
ATOM 27 OP2 A B 8 3.086 31.029 119.542 1.00 77.42 O
ATOM 28 O5' A B 8 4.037 32.257 117.570 1.00 78.34 O
TER
Atoms:
OP1: (5.934,28.503,129.784)
OP2: (6.590,26.600,128.192)
C3': (7.519,31.017,125.789)
C1': (9.704,30.349,125.215)
C5': (7.777,30.238,128.223)
O4': (9.596,30.315,126.630)
C8: (9.073,27.885,125.366)
O2': (9.003,32.580,124.639)
C6: (9.978,26.469,122.280)
C5: (9.672,27.175,123.456)
C4: (9.993,28.521,123.482)
P: (6.948,27.841,128.926)
C4': (8.373,30.982,127.048)
C2': (8.568,31.237,124.708)
C2: (10.807,28.457,121.440)
N1: (10.556,27.153,121.270)
N3: (10.568,29.231,122.497)
N6: (9.729,25.167,122.112)
N7: (9.092,26.785,124.654)
N9: (9.597,28.977,124.717)
O5': (7.459,28.900,127.849)
O3': (6.576,32.084,125.831)
OP2: (6.590,26.600,128.192)
C3': (7.519,31.017,125.789)
C1': (9.704,30.349,125.215)
C5': (7.777,30.238,128.223)
O4': (9.596,30.315,126.630)
C8: (9.073,27.885,125.366)
O2': (9.003,32.580,124.639)
C6: (9.978,26.469,122.280)
C5: (9.672,27.175,123.456)
C4: (9.993,28.521,123.482)
P: (6.948,27.841,128.926)
C4': (8.373,30.982,127.048)
C2': (8.568,31.237,124.708)
C2: (10.807,28.457,121.440)
N1: (10.556,27.153,121.270)
N3: (10.568,29.231,122.497)
N6: (9.729,25.167,122.112)
N7: (9.092,26.785,124.654)
N9: (9.597,28.977,124.717)
O5': (7.459,28.900,127.849)
O3': (6.576,32.084,125.831)
OP1: (4.310,33.102,125.461)
OP2: (4.604,30.564,125.716)
C3': (5.511,31.611,120.720)
C1': (7.289,30.075,120.977)
C5': (6.050,32.762,122.935)
O6: (5.986,24.573,122.986)
O4': (7.482,31.118,121.914)
C8: (6.296,28.850,122.964)
C2: (7.377,25.856,119.970)
C6: (6.395,25.418,122.178)
C5: (6.433,26.829,122.317)
C4: (6.934,27.587,121.280)
P: (5.106,31.871,125.219)
C4': (6.571,32.211,121.630)
C2': (6.304,30.581,119.923)
O2': (7.026,31.153,118.852)
N1: (6.898,25.014,120.945)
N2: (7.822,25.273,118.843)
N3: (7.418,27.172,120.090)
N7: (6.033,27.638,123.372)
N9: (6.850,28.890,121.708)
O5': (5.352,31.745,123.650)
O3': (4.964,32.625,119.883)
OP2: (4.604,30.564,125.716)
C3': (5.511,31.611,120.720)
C1': (7.289,30.075,120.977)
C5': (6.050,32.762,122.935)
O6: (5.986,24.573,122.986)
O4': (7.482,31.118,121.914)
C8: (6.296,28.850,122.964)
C2: (7.377,25.856,119.970)
C6: (6.395,25.418,122.178)
C5: (6.433,26.829,122.317)
C4: (6.934,27.587,121.280)
P: (5.106,31.871,125.219)
C4': (6.571,32.211,121.630)
C2': (6.304,30.581,119.923)
O2': (7.026,31.153,118.852)
N1: (6.898,25.014,120.945)
N2: (7.822,25.273,118.843)
N3: (7.418,27.172,120.090)
N7: (6.033,27.638,123.372)
N9: (6.850,28.890,121.708)
O5': (5.352,31.745,123.650)
O3': (4.964,32.625,119.883)
Image (generated by PyMOL):