ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KFU:N48:N49

Extra

PDB:
ATOM 1 O3' C A 47 -6.294 -18.882 76.918 1.00118.72 O
ATOM 2 P A A 48 -7.220 -19.401 78.123 1.00174.88 P
ATOM 3 OP1 A A 48 -6.315 -19.820 79.222 1.00186.41 O
ATOM 4 OP2 A A 48 -8.164 -20.398 77.555 1.00 61.77 O
ATOM 5 O5' A A 48 -8.008 -18.085 78.541 1.00134.59 O
ATOM 6 C5' A A 48 -7.926 -16.907 77.746 1.00173.22 C
ATOM 7 C4' A A 48 -9.025 -15.934 78.080 1.00143.41 C
ATOM 8 O4' A A 48 -9.593 -15.417 76.843 1.00 90.17 O
ATOM 9 C3' A A 48 -10.192 -16.522 78.872 1.00119.59 C
ATOM 10 O3' A A 48 -10.714 -15.525 79.752 1.00145.81 O
ATOM 11 C2' A A 48 -11.210 -16.830 77.778 1.00141.53 C
ATOM 12 O2' A A 48 -12.551 -16.902 78.213 1.00140.32 O
ATOM 13 C1' A A 48 -10.984 -15.666 76.821 1.00106.83 C
ATOM 14 N9 A A 48 -11.384 -15.949 75.442 1.00 96.67 N
ATOM 15 C8 A A 48 -11.048 -17.033 74.672 1.00 93.42 C
ATOM 16 N7 A A 48 -11.582 -17.013 73.475 1.00 82.60 N
ATOM 17 C5 A A 48 -12.323 -15.840 73.463 1.00 96.05 C
ATOM 18 C6 A A 48 -13.127 -15.241 72.480 1.00 97.72 C
ATOM 19 N6 A A 48 -13.325 -15.766 71.269 1.00 86.92 N
ATOM 20 N1 A A 48 -13.728 -14.071 72.788 1.00 77.51 N
ATOM 21 C2 A A 48 -13.528 -13.547 74.004 1.00125.19 C
ATOM 22 N3 A A 48 -12.796 -14.016 75.011 1.00133.61 N
ATOM 23 C4 A A 48 -12.214 -15.178 74.670 1.00 88.39 C
ATOM 24 P G A 49 -11.941 -15.863 80.735 1.00187.15 P
ATOM 25 OP1 G A 49 -11.595 -15.318 82.070 1.00231.87 O
ATOM 26 OP2 G A 49 -12.222 -17.316 80.609 1.00104.29 O
ATOM 27 O5' G A 49 -13.134 -15.024 80.100 1.00159.22 O
TER

ATOM 1 O3' A B 48 -10.714 -15.525 79.752 1.00145.81 O
ATOM 2 P G B 49 -11.941 -15.863 80.735 1.00187.15 P
ATOM 3 OP1 G B 49 -11.595 -15.318 82.070 1.00231.87 O
ATOM 4 OP2 G B 49 -12.222 -17.316 80.609 1.00104.29 O
ATOM 5 O5' G B 49 -13.134 -15.024 80.100 1.00159.22 O
ATOM 6 C5' G B 49 -14.425 -15.590 79.949 1.00118.87 C
ATOM 7 C4' G B 49 -15.337 -14.676 79.174 1.00121.39 C
ATOM 8 O4' G B 49 -14.768 -14.402 77.867 1.00124.11 O
ATOM 9 C3' G B 49 -16.719 -15.225 78.867 1.00119.08 C
ATOM 10 O3' G B 49 -17.612 -15.104 79.958 1.00107.62 O
ATOM 11 C2' G B 49 -17.133 -14.421 77.642 1.00113.54 C
ATOM 12 O2' G B 49 -17.576 -13.125 78.017 1.00127.57 O
ATOM 13 C1' G B 49 -15.799 -14.282 76.909 1.00123.25 C
ATOM 14 N9 G B 49 -15.616 -15.334 75.892 1.00117.42 N
ATOM 15 C8 G B 49 -14.702 -16.358 75.928 1.00124.71 C
ATOM 16 N7 G B 49 -14.767 -17.139 74.885 1.00133.00 N
ATOM 17 C5 G B 49 -15.786 -16.600 74.113 1.00122.70 C
ATOM 18 C6 G B 49 -16.311 -17.023 72.865 1.00122.99 C
ATOM 19 O6 G B 49 -15.973 -17.988 72.169 1.00144.93 O
ATOM 20 N1 G B 49 -17.337 -16.190 72.438 1.00118.22 N
ATOM 21 C2 G B 49 -17.798 -15.094 73.120 1.00129.67 C
ATOM 22 N2 G B 49 -18.798 -14.421 72.534 1.00101.81 N
ATOM 23 N3 G B 49 -17.319 -14.688 74.284 1.00129.22 N
ATOM 24 C4 G B 49 -16.320 -15.482 74.719 1.00113.50 C
ATOM 25 P G B 50 -18.996 -15.914 79.958 1.00172.37 P
ATOM 26 OP1 G B 50 -19.597 -15.755 81.304 1.00134.15 O
ATOM 27 OP2 G B 50 -18.704 -17.280 79.465 1.00103.64 O
ATOM 28 O5' G B 50 -19.860 -15.126 78.884 1.00 79.04 O
TER

Atoms:
OP1: (-6.315,-19.820,79.222)
OP2: (-8.164,-20.398,77.555)
C3': (-10.192,-16.522,78.872)
C1': (-10.984,-15.666,76.821)
C5': (-7.926,-16.907,77.746)
O4': (-9.593,-15.417,76.843)
C8: (-11.048,-17.033,74.672)
O2': (-12.551,-16.902,78.213)
C6: (-13.127,-15.241,72.480)
C5: (-12.323,-15.840,73.463)
C4: (-12.214,-15.178,74.670)
P: (-7.220,-19.401,78.123)
C4': (-9.025,-15.934,78.080)
C2': (-11.210,-16.830,77.778)
C2: (-13.528,-13.547,74.004)
N1: (-13.728,-14.071,72.788)
N3: (-12.796,-14.016,75.011)
N6: (-13.325,-15.766,71.269)
N7: (-11.582,-17.013,73.475)
N9: (-11.384,-15.949,75.442)
O5': (-8.008,-18.085,78.541)
O3': (-10.714,-15.525,79.752)
OP1: (-11.595,-15.318,82.070)
OP2: (-12.222,-17.316,80.609)
C3': (-16.719,-15.225,78.867)
C1': (-15.799,-14.282,76.909)
C5': (-14.425,-15.590,79.949)
O6: (-15.973,-17.988,72.169)
O4': (-14.768,-14.402,77.867)
C8: (-14.702,-16.358,75.928)
C2: (-17.798,-15.094,73.120)
C6: (-16.311,-17.023,72.865)
C5: (-15.786,-16.600,74.113)
C4: (-16.320,-15.482,74.719)
P: (-11.941,-15.863,80.735)
C4': (-15.337,-14.676,79.174)
C2': (-17.133,-14.421,77.642)
O2': (-17.576,-13.125,78.017)
N1: (-17.337,-16.190,72.438)
N2: (-18.798,-14.421,72.534)
N3: (-17.319,-14.688,74.284)
N7: (-14.767,-17.139,74.885)
N9: (-15.616,-15.334,75.892)
O5': (-13.134,-15.024,80.100)
O3': (-17.612,-15.104,79.958)
Image (generated by PyMOL):
PyMOL image
show in jmol