Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2440:A2438
Extra
PDB:
ATOM 1 O3' G A2439 -55.668 133.411 168.187 1.00 0.01 O
ATOM 2 P A A2440 -57.016 134.062 168.673 1.00 0.01 P
ATOM 3 OP1 A A2440 -56.994 134.004 170.133 1.00 0.01 O
ATOM 4 OP2 A A2440 -58.111 133.395 167.954 1.00 0.01 O
ATOM 5 O5' A A2440 -56.864 135.564 168.184 1.00 0.01 O
ATOM 6 C5' A A2440 -56.582 135.870 166.823 1.00 0.01 C
ATOM 7 C4' A A2440 -57.645 136.755 166.240 1.00 0.01 C
ATOM 8 O4' A A2440 -57.642 138.014 166.938 1.00 0.01 O
ATOM 9 C3' A A2440 -57.509 137.090 164.762 1.00 0.01 C
ATOM 10 O3' A A2440 -58.818 137.132 164.170 1.00 0.01 O
ATOM 11 C2' A A2440 -56.915 138.498 164.770 1.00 0.01 C
ATOM 12 O2' A A2440 -57.232 139.246 163.617 1.00 0.01 O
ATOM 13 C1' A A2440 -57.557 139.086 166.022 1.00 0.01 C
ATOM 14 N9 A A2440 -56.798 140.138 166.691 1.00 0.01 N
ATOM 15 C8 A A2440 -55.546 140.007 167.261 1.00 0.01 C
ATOM 16 N7 A A2440 -55.115 141.062 167.916 1.00 0.01 N
ATOM 17 C5 A A2440 -56.190 141.919 167.798 1.00 0.01 C
ATOM 18 C6 A A2440 -56.335 143.198 168.288 1.00 0.01 C
ATOM 19 N6 A A2440 -55.337 143.759 168.989 1.00 0.01 N
ATOM 20 N1 A A2440 -57.501 143.827 168.000 1.00 0.01 N
ATOM 21 C2 A A2440 -58.436 143.188 167.293 1.00 0.01 C
ATOM 22 N3 A A2440 -58.406 141.968 166.782 1.00 0.01 N
ATOM 23 C4 A A2440 -57.240 141.381 167.074 1.00 0.01 C
ATOM 24 P U A2441 -59.512 135.784 163.641 1.00 2.26 P
ATOM 25 OP1 U A2441 -60.974 136.047 163.540 1.00 2.26 O
ATOM 26 OP2 U A2441 -59.047 134.681 164.504 1.00 2.26 O
ATOM 27 O5' U A2441 -58.878 135.630 162.196 1.00 2.26 O
TER
ATOM 1 O3' G B2437 -48.117 141.360 168.704 1.00 0.01 O
ATOM 2 P G B2438 -48.270 139.921 169.402 1.00 0.01 P
ATOM 3 OP1 G B2438 -48.206 140.115 170.862 1.00 0.01 O
ATOM 4 OP2 G B2438 -47.278 139.024 168.767 1.00 0.01 O
ATOM 5 O5' G B2438 -49.740 139.484 168.996 1.00 0.01 O
ATOM 6 C5' G B2438 -50.580 140.348 168.265 1.00 0.01 C
ATOM 7 C4' G B2438 -51.504 139.559 167.398 1.00 0.01 C
ATOM 8 O4' G B2438 -50.933 139.422 166.082 1.00 0.01 O
ATOM 9 C3' G B2438 -51.754 138.133 167.851 1.00 0.01 C
ATOM 10 O3' G B2438 -52.755 138.062 168.863 1.00 0.01 O
ATOM 11 C2' G B2438 -52.137 137.437 166.542 1.00 0.01 C
ATOM 12 O2' G B2438 -53.494 137.680 166.209 1.00 0.01 O
ATOM 13 C1' G B2438 -51.273 138.181 165.531 1.00 0.01 C
ATOM 14 N9 G B2438 -50.034 137.466 165.207 1.00 0.01 N
ATOM 15 C8 G B2438 -48.834 137.593 165.867 1.00 0.01 C
ATOM 16 N7 G B2438 -47.879 136.855 165.345 1.00 0.01 N
ATOM 17 C5 G B2438 -48.486 136.215 164.283 1.00 0.01 C
ATOM 18 C6 G B2438 -47.919 135.318 163.401 1.00 0.01 C
ATOM 19 O6 G B2438 -46.760 134.934 163.421 1.00 0.01 O
ATOM 20 N1 G B2438 -48.840 134.922 162.461 1.00 0.01 N
ATOM 21 C2 G B2438 -50.138 135.342 162.426 1.00 0.01 C
ATOM 22 N2 G B2438 -50.903 134.854 161.467 1.00 0.01 N
ATOM 23 N3 G B2438 -50.707 136.175 163.253 1.00 0.01 N
ATOM 24 C4 G B2438 -49.808 136.584 164.160 1.00 0.01 C
ATOM 25 P G B2439 -52.488 137.350 170.277 1.00 0.01 P
ATOM 26 OP1 G B2439 -53.206 138.119 171.299 1.00 0.01 O
ATOM 27 OP2 G B2439 -51.038 137.154 170.441 1.00 0.01 O
ATOM 28 O5' G B2439 -53.200 135.974 170.073 1.00 0.01 O
TER
ATOM 2 P A A2440 -57.016 134.062 168.673 1.00 0.01 P
ATOM 3 OP1 A A2440 -56.994 134.004 170.133 1.00 0.01 O
ATOM 4 OP2 A A2440 -58.111 133.395 167.954 1.00 0.01 O
ATOM 5 O5' A A2440 -56.864 135.564 168.184 1.00 0.01 O
ATOM 6 C5' A A2440 -56.582 135.870 166.823 1.00 0.01 C
ATOM 7 C4' A A2440 -57.645 136.755 166.240 1.00 0.01 C
ATOM 8 O4' A A2440 -57.642 138.014 166.938 1.00 0.01 O
ATOM 9 C3' A A2440 -57.509 137.090 164.762 1.00 0.01 C
ATOM 10 O3' A A2440 -58.818 137.132 164.170 1.00 0.01 O
ATOM 11 C2' A A2440 -56.915 138.498 164.770 1.00 0.01 C
ATOM 12 O2' A A2440 -57.232 139.246 163.617 1.00 0.01 O
ATOM 13 C1' A A2440 -57.557 139.086 166.022 1.00 0.01 C
ATOM 14 N9 A A2440 -56.798 140.138 166.691 1.00 0.01 N
ATOM 15 C8 A A2440 -55.546 140.007 167.261 1.00 0.01 C
ATOM 16 N7 A A2440 -55.115 141.062 167.916 1.00 0.01 N
ATOM 17 C5 A A2440 -56.190 141.919 167.798 1.00 0.01 C
ATOM 18 C6 A A2440 -56.335 143.198 168.288 1.00 0.01 C
ATOM 19 N6 A A2440 -55.337 143.759 168.989 1.00 0.01 N
ATOM 20 N1 A A2440 -57.501 143.827 168.000 1.00 0.01 N
ATOM 21 C2 A A2440 -58.436 143.188 167.293 1.00 0.01 C
ATOM 22 N3 A A2440 -58.406 141.968 166.782 1.00 0.01 N
ATOM 23 C4 A A2440 -57.240 141.381 167.074 1.00 0.01 C
ATOM 24 P U A2441 -59.512 135.784 163.641 1.00 2.26 P
ATOM 25 OP1 U A2441 -60.974 136.047 163.540 1.00 2.26 O
ATOM 26 OP2 U A2441 -59.047 134.681 164.504 1.00 2.26 O
ATOM 27 O5' U A2441 -58.878 135.630 162.196 1.00 2.26 O
TER
ATOM 1 O3' G B2437 -48.117 141.360 168.704 1.00 0.01 O
ATOM 2 P G B2438 -48.270 139.921 169.402 1.00 0.01 P
ATOM 3 OP1 G B2438 -48.206 140.115 170.862 1.00 0.01 O
ATOM 4 OP2 G B2438 -47.278 139.024 168.767 1.00 0.01 O
ATOM 5 O5' G B2438 -49.740 139.484 168.996 1.00 0.01 O
ATOM 6 C5' G B2438 -50.580 140.348 168.265 1.00 0.01 C
ATOM 7 C4' G B2438 -51.504 139.559 167.398 1.00 0.01 C
ATOM 8 O4' G B2438 -50.933 139.422 166.082 1.00 0.01 O
ATOM 9 C3' G B2438 -51.754 138.133 167.851 1.00 0.01 C
ATOM 10 O3' G B2438 -52.755 138.062 168.863 1.00 0.01 O
ATOM 11 C2' G B2438 -52.137 137.437 166.542 1.00 0.01 C
ATOM 12 O2' G B2438 -53.494 137.680 166.209 1.00 0.01 O
ATOM 13 C1' G B2438 -51.273 138.181 165.531 1.00 0.01 C
ATOM 14 N9 G B2438 -50.034 137.466 165.207 1.00 0.01 N
ATOM 15 C8 G B2438 -48.834 137.593 165.867 1.00 0.01 C
ATOM 16 N7 G B2438 -47.879 136.855 165.345 1.00 0.01 N
ATOM 17 C5 G B2438 -48.486 136.215 164.283 1.00 0.01 C
ATOM 18 C6 G B2438 -47.919 135.318 163.401 1.00 0.01 C
ATOM 19 O6 G B2438 -46.760 134.934 163.421 1.00 0.01 O
ATOM 20 N1 G B2438 -48.840 134.922 162.461 1.00 0.01 N
ATOM 21 C2 G B2438 -50.138 135.342 162.426 1.00 0.01 C
ATOM 22 N2 G B2438 -50.903 134.854 161.467 1.00 0.01 N
ATOM 23 N3 G B2438 -50.707 136.175 163.253 1.00 0.01 N
ATOM 24 C4 G B2438 -49.808 136.584 164.160 1.00 0.01 C
ATOM 25 P G B2439 -52.488 137.350 170.277 1.00 0.01 P
ATOM 26 OP1 G B2439 -53.206 138.119 171.299 1.00 0.01 O
ATOM 27 OP2 G B2439 -51.038 137.154 170.441 1.00 0.01 O
ATOM 28 O5' G B2439 -53.200 135.974 170.073 1.00 0.01 O
TER
Atoms:
OP1: (-56.994,134.004,170.133)
OP2: (-58.111,133.395,167.954)
C3': (-57.509,137.090,164.762)
C1': (-57.557,139.086,166.022)
C5': (-56.582,135.870,166.823)
O4': (-57.642,138.014,166.938)
C8: (-55.546,140.007,167.261)
O2': (-57.232,139.246,163.617)
C6: (-56.335,143.198,168.288)
C5: (-56.190,141.919,167.798)
C4: (-57.240,141.381,167.074)
P: (-57.016,134.062,168.673)
C4': (-57.645,136.755,166.240)
C2': (-56.915,138.498,164.770)
C2: (-58.436,143.188,167.293)
N1: (-57.501,143.827,168.000)
N3: (-58.406,141.968,166.782)
N6: (-55.337,143.759,168.989)
N7: (-55.115,141.062,167.916)
N9: (-56.798,140.138,166.691)
O5': (-56.864,135.564,168.184)
O3': (-58.818,137.132,164.170)
OP2: (-58.111,133.395,167.954)
C3': (-57.509,137.090,164.762)
C1': (-57.557,139.086,166.022)
C5': (-56.582,135.870,166.823)
O4': (-57.642,138.014,166.938)
C8: (-55.546,140.007,167.261)
O2': (-57.232,139.246,163.617)
C6: (-56.335,143.198,168.288)
C5: (-56.190,141.919,167.798)
C4: (-57.240,141.381,167.074)
P: (-57.016,134.062,168.673)
C4': (-57.645,136.755,166.240)
C2': (-56.915,138.498,164.770)
C2: (-58.436,143.188,167.293)
N1: (-57.501,143.827,168.000)
N3: (-58.406,141.968,166.782)
N6: (-55.337,143.759,168.989)
N7: (-55.115,141.062,167.916)
N9: (-56.798,140.138,166.691)
O5': (-56.864,135.564,168.184)
O3': (-58.818,137.132,164.170)
OP1: (-48.206,140.115,170.862)
OP2: (-47.278,139.024,168.767)
C3': (-51.754,138.133,167.851)
C1': (-51.273,138.181,165.531)
C5': (-50.580,140.348,168.265)
O6: (-46.760,134.934,163.421)
O4': (-50.933,139.422,166.082)
C8: (-48.834,137.593,165.867)
C2: (-50.138,135.342,162.426)
C6: (-47.919,135.318,163.401)
C5: (-48.486,136.215,164.283)
C4: (-49.808,136.584,164.160)
P: (-48.270,139.921,169.402)
C4': (-51.504,139.559,167.398)
C2': (-52.137,137.437,166.542)
O2': (-53.494,137.680,166.209)
N1: (-48.840,134.922,162.461)
N2: (-50.903,134.854,161.467)
N3: (-50.707,136.175,163.253)
N7: (-47.879,136.855,165.345)
N9: (-50.034,137.466,165.207)
O5': (-49.740,139.484,168.996)
O3': (-52.755,138.062,168.863)
OP2: (-47.278,139.024,168.767)
C3': (-51.754,138.133,167.851)
C1': (-51.273,138.181,165.531)
C5': (-50.580,140.348,168.265)
O6: (-46.760,134.934,163.421)
O4': (-50.933,139.422,166.082)
C8: (-48.834,137.593,165.867)
C2: (-50.138,135.342,162.426)
C6: (-47.919,135.318,163.401)
C5: (-48.486,136.215,164.283)
C4: (-49.808,136.584,164.160)
P: (-48.270,139.921,169.402)
C4': (-51.504,139.559,167.398)
C2': (-52.137,137.437,166.542)
O2': (-53.494,137.680,166.209)
N1: (-48.840,134.922,162.461)
N2: (-50.903,134.854,161.467)
N3: (-50.707,136.175,163.253)
N7: (-47.879,136.855,165.345)
N9: (-50.034,137.466,165.207)
O5': (-49.740,139.484,168.996)
O3': (-52.755,138.062,168.863)
Image (generated by PyMOL):