ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A2128:A2127

Extra

PDB:
ATOM 1 O3' G A2127 -97.468 34.149 95.944 1.00267.43 O
ATOM 2 P A A2128 -97.521 35.070 94.626 1.00262.95 P
ATOM 3 OP1 A A2128 -96.943 34.291 93.509 1.00223.75 O
ATOM 4 OP2 A A2128 -96.969 36.403 94.960 1.00212.80 O
ATOM 5 O5' A A2128 -99.087 35.242 94.344 1.00235.09 O
ATOM 6 C5' A A2128 -99.890 34.106 94.042 1.00230.91 C
ATOM 7 C4' A A2128 -101.354 34.476 93.854 1.00235.78 C
ATOM 8 O4' A A2128 -101.955 34.892 95.109 1.00237.45 O
ATOM 9 C3' A A2128 -101.643 35.664 92.950 1.00233.45 C
ATOM 10 O3' A A2128 -101.497 35.346 91.578 1.00240.88 O
ATOM 11 C2' A A2128 -103.099 35.917 93.319 1.00233.14 C
ATOM 12 O2' A A2128 -103.983 34.928 92.826 1.00223.92 O
ATOM 13 C1' A A2128 -102.980 35.834 94.836 1.00235.36 C
ATOM 14 N9 A A2128 -102.614 37.130 95.396 1.00232.98 N
ATOM 15 C8 A A2128 -101.526 37.444 96.160 1.00224.01 C
ATOM 16 N7 A A2128 -101.470 38.709 96.506 1.00222.45 N
ATOM 17 C5 A A2128 -102.594 39.264 95.919 1.00229.40 C
ATOM 18 C6 A A2128 -103.114 40.572 95.902 1.00227.96 C
ATOM 19 N6 A A2128 -102.535 41.602 96.521 1.00227.35 N
ATOM 20 N1 A A2128 -104.256 40.784 95.220 1.00226.00 N
ATOM 21 C2 A A2128 -104.830 39.748 94.600 1.00224.59 C
ATOM 22 N3 A A2128 -104.444 38.478 94.544 1.00219.17 N
ATOM 23 C4 A A2128 -103.306 38.304 95.230 1.00229.15 C
ATOM 24 P A A2129 -101.187 36.539 90.559 1.00276.06 P
ATOM 25 OP1 A A2129 -100.704 35.945 89.292 1.00248.75 O
ATOM 26 OP2 A A2129 -100.354 37.534 91.273 1.00236.39 O
ATOM 27 O5' A A2129 -102.637 37.165 90.294 1.00237.84 O
TER

ATOM 1 O3' U B2126 -95.530 29.455 100.635 1.00266.27 O
ATOM 2 P G B2127 -95.872 29.981 99.155 1.00281.87 P
ATOM 3 OP1 G B2127 -97.328 29.822 98.953 1.00245.71 O
ATOM 4 OP2 G B2127 -94.927 29.327 98.225 1.00267.95 O
ATOM 5 O5' G B2127 -95.559 31.552 99.173 1.00246.17 O
ATOM 6 C5' G B2127 -95.703 32.331 97.976 1.00237.82 C
ATOM 7 C4' G B2127 -96.677 33.481 98.182 1.00247.89 C
ATOM 8 O4' G B2127 -96.308 34.231 99.367 1.00253.35 O
ATOM 9 C3' G B2127 -96.728 34.560 97.105 1.00258.78 C
ATOM 10 O3' G B2127 -97.468 34.149 95.944 1.00267.43 O
ATOM 11 C2' G B2127 -97.441 35.675 97.872 1.00251.82 C
ATOM 12 O2' G B2127 -98.845 35.511 97.898 1.00243.93 O
ATOM 13 C1' G B2127 -96.879 35.527 99.287 1.00248.47 C
ATOM 14 N9 G B2127 -95.872 36.535 99.620 1.00254.68 N
ATOM 15 C8 G B2127 -94.509 36.402 99.504 1.00240.54 C
ATOM 16 N7 G B2127 -93.848 37.465 99.871 1.00243.95 N
ATOM 17 C5 G B2127 -94.836 38.367 100.256 1.00260.38 C
ATOM 18 C6 G B2127 -94.726 39.694 100.748 1.00256.15 C
ATOM 19 O6 G B2127 -93.697 40.357 100.947 1.00250.97 O
ATOM 20 N1 G B2127 -95.972 40.259 101.018 1.00258.67 N
ATOM 21 C2 G B2127 -97.177 39.623 100.837 1.00251.27 C
ATOM 22 N2 G B2127 -98.274 40.330 101.153 1.00238.86 N
ATOM 23 N3 G B2127 -97.291 38.381 100.379 1.00248.09 N
ATOM 24 C4 G B2127 -96.088 37.811 100.107 1.00258.50 C
ATOM 25 P A B2128 -97.521 35.070 94.626 1.00262.95 P
ATOM 26 OP1 A B2128 -96.943 34.291 93.509 1.00223.75 O
ATOM 27 OP2 A B2128 -96.969 36.403 94.960 1.00212.80 O
ATOM 28 O5' A B2128 -99.087 35.242 94.344 1.00235.09 O
TER

Atoms:
OP1: (-96.943,34.291,93.509)
OP2: (-96.969,36.403,94.960)
C3': (-101.643,35.664,92.950)
C1': (-102.980,35.834,94.836)
C5': (-99.890,34.106,94.042)
O4': (-101.955,34.892,95.109)
C8: (-101.526,37.444,96.160)
O2': (-103.983,34.928,92.826)
C6: (-103.114,40.572,95.902)
C5: (-102.594,39.264,95.919)
C4: (-103.306,38.304,95.230)
P: (-97.521,35.070,94.626)
C4': (-101.354,34.476,93.854)
C2': (-103.099,35.917,93.319)
C2: (-104.830,39.748,94.600)
N1: (-104.256,40.784,95.220)
N3: (-104.444,38.478,94.544)
N6: (-102.535,41.602,96.521)
N7: (-101.470,38.709,96.506)
N9: (-102.614,37.130,95.396)
O5': (-99.087,35.242,94.344)
O3': (-101.497,35.346,91.578)
OP1: (-97.328,29.822,98.953)
OP2: (-94.927,29.327,98.225)
C3': (-96.728,34.560,97.105)
C1': (-96.879,35.527,99.287)
C5': (-95.703,32.331,97.976)
O6: (-93.697,40.357,100.947)
O4': (-96.308,34.231,99.367)
C8: (-94.509,36.402,99.504)
C2: (-97.177,39.623,100.837)
C6: (-94.726,39.694,100.748)
C5: (-94.836,38.367,100.256)
C4: (-96.088,37.811,100.107)
P: (-95.872,29.981,99.155)
C4': (-96.677,33.481,98.182)
C2': (-97.441,35.675,97.872)
O2': (-98.845,35.511,97.898)
N1: (-95.972,40.259,101.018)
N2: (-98.274,40.330,101.153)
N3: (-97.291,38.381,100.379)
N7: (-93.848,37.465,99.871)
N9: (-95.872,36.535,99.620)
O5': (-95.559,31.552,99.173)
O3': (-97.468,34.149,95.944)
Image (generated by PyMOL):
PyMOL image
show in jmol