ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02541:02540

Extra

PDB:
ATOM 1 O3' G A2540 77.823 129.430 160.219 1.00 64.13 O
ATOM 2 P A A2541 77.079 130.851 160.234 1.00 64.19 P
ATOM 3 OP1 A A2541 76.443 131.031 158.906 1.00 64.90 O
ATOM 4 OP2 A A2541 78.019 131.881 160.741 1.00 64.64 O
ATOM 5 O5' A A2541 75.940 130.655 161.327 1.00 62.31 O
ATOM 6 C5' A A2541 74.584 130.978 161.042 1.00 60.30 C
ATOM 7 C4' A A2541 73.818 129.723 160.733 1.00 60.63 C
ATOM 8 O4' A A2541 74.099 128.699 161.723 1.00 61.55 O
ATOM 9 C3' A A2541 72.311 129.888 160.733 1.00 60.88 C
ATOM 10 O3' A A2541 71.848 130.317 159.467 1.00 60.22 O
ATOM 11 C2' A A2541 71.837 128.506 161.142 1.00 61.50 C
ATOM 12 O2' A A2541 71.955 127.586 160.080 1.00 62.64 O
ATOM 13 C1' A A2541 72.879 128.164 162.209 1.00 63.16 C
ATOM 14 N9 A A2541 72.596 128.791 163.506 1.00 64.58 N
ATOM 15 C8 A A2541 73.434 129.597 164.239 1.00 65.30 C
ATOM 16 N7 A A2541 72.908 130.034 165.356 1.00 65.73 N
ATOM 17 C5 A A2541 71.637 129.480 165.365 1.00 65.52 C
ATOM 18 C6 A A2541 70.572 129.575 166.281 1.00 66.20 C
ATOM 19 N6 A A2541 70.618 130.299 167.403 1.00 65.55 N
ATOM 20 N1 A A2541 69.439 128.895 165.997 1.00 66.38 N
ATOM 21 C2 A A2541 69.390 128.180 164.866 1.00 66.40 C
ATOM 22 N3 A A2541 70.320 128.021 163.925 1.00 65.88 N
ATOM 23 C4 A A2541 71.432 128.705 164.237 1.00 65.27 C
ATOM 24 P A A2542 70.922 131.624 159.363 1.00 61.76 P
ATOM 25 OP1 A A2542 70.782 131.954 157.922 1.00 62.65 O
ATOM 26 OP2 A A2542 71.430 132.659 160.304 1.00 61.29 O
ATOM 27 O5' A A2542 69.509 131.123 159.891 1.00 61.01 O
TER

ATOM 1 O3' G B2539 83.827 128.056 160.193 1.00 75.45 O
ATOM 2 P G B2540 82.693 129.141 159.830 1.00 72.24 P
ATOM 3 OP1 G B2540 82.361 128.923 158.402 1.00 73.10 O
ATOM 4 OP2 G B2540 83.123 130.485 160.283 1.00 72.53 O
ATOM 5 O5' G B2540 81.432 128.711 160.703 1.00 70.87 O
ATOM 6 C5' G B2540 80.512 127.709 160.237 1.00 68.71 C
ATOM 7 C4' G B2540 79.279 127.699 161.101 1.00 67.54 C
ATOM 8 O4' G B2540 79.621 127.262 162.443 1.00 67.95 O
ATOM 9 C3' G B2540 78.639 129.056 161.315 1.00 66.20 C
ATOM 10 O3' G B2540 77.823 129.430 160.219 1.00 64.13 O
ATOM 11 C2' G B2540 77.862 128.840 162.605 1.00 67.13 C
ATOM 12 O2' G B2540 76.658 128.129 162.409 1.00 67.23 O
ATOM 13 C1' G B2540 78.847 127.979 163.396 1.00 68.37 C
ATOM 14 N9 G B2540 79.756 128.801 164.191 1.00 70.38 N
ATOM 15 C8 G B2540 81.000 129.254 163.814 1.00 71.14 C
ATOM 16 N7 G B2540 81.570 130.002 164.718 1.00 71.56 N
ATOM 17 C5 G B2540 80.653 130.043 165.760 1.00 71.46 C
ATOM 18 C6 G B2540 80.716 130.708 167.013 1.00 71.15 C
ATOM 19 O6 G B2540 81.620 131.418 167.463 1.00 71.93 O
ATOM 20 N1 G B2540 79.573 130.482 167.769 1.00 69.48 N
ATOM 21 C2 G B2540 78.509 129.720 167.379 1.00 68.72 C
ATOM 22 N2 G B2540 77.508 129.634 168.259 1.00 68.33 N
ATOM 23 N3 G B2540 78.432 129.093 166.215 1.00 70.09 N
ATOM 24 C4 G B2540 79.532 129.298 165.458 1.00 70.66 C
ATOM 25 P A B2541 77.079 130.851 160.234 1.00 64.19 P
ATOM 26 OP1 A B2541 76.443 131.031 158.906 1.00 64.90 O
ATOM 27 OP2 A B2541 78.019 131.881 160.741 1.00 64.64 O
ATOM 28 O5' A B2541 75.940 130.655 161.327 1.00 62.31 O
TER

Atoms:
OP1: (76.443,131.031,158.906)
OP2: (78.019,131.881,160.741)
C3': (72.311,129.888,160.733)
C1': (72.879,128.164,162.209)
C5': (74.584,130.978,161.042)
O4': (74.099,128.699,161.723)
C8: (73.434,129.597,164.239)
O2': (71.955,127.586,160.080)
C6: (70.572,129.575,166.281)
C5: (71.637,129.480,165.365)
C4: (71.432,128.705,164.237)
P: (77.079,130.851,160.234)
C4': (73.818,129.723,160.733)
C2': (71.837,128.506,161.142)
C2: (69.390,128.180,164.866)
N1: (69.439,128.895,165.997)
N3: (70.320,128.021,163.925)
N6: (70.618,130.299,167.403)
N7: (72.908,130.034,165.356)
N9: (72.596,128.791,163.506)
O5': (75.940,130.655,161.327)
O3': (71.848,130.317,159.467)
OP1: (82.361,128.923,158.402)
OP2: (83.123,130.485,160.283)
C3': (78.639,129.056,161.315)
C1': (78.847,127.979,163.396)
C5': (80.512,127.709,160.237)
O6: (81.620,131.418,167.463)
O4': (79.621,127.262,162.443)
C8: (81.000,129.254,163.814)
C2: (78.509,129.720,167.379)
C6: (80.716,130.708,167.013)
C5: (80.653,130.043,165.760)
C4: (79.532,129.298,165.458)
P: (82.693,129.141,159.830)
C4': (79.279,127.699,161.101)
C2': (77.862,128.840,162.605)
O2': (76.658,128.129,162.409)
N1: (79.573,130.482,167.769)
N2: (77.508,129.634,168.259)
N3: (78.432,129.093,166.215)
N7: (81.570,130.002,164.718)
N9: (79.756,128.801,164.191)
O5': (81.432,128.711,160.703)
O3': (77.823,129.430,160.219)
Image (generated by PyMOL):
PyMOL image
show in jmol