Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2HOJ:A21:A20
Extra
PDB:
ATOM 1 O3' G A 20 4.031 39.865 75.370 1.00 81.25 O
ATOM 2 P A A 21 3.889 40.633 73.958 1.00 84.24 P
ATOM 3 OP1 A A 21 3.875 39.606 72.885 1.00 85.21 O
ATOM 4 OP2 A A 21 4.930 41.693 73.941 1.00 85.27 O
ATOM 5 O5' A A 21 2.450 41.334 74.013 1.00 83.75 O
ATOM 6 C5' A A 21 1.265 40.636 73.604 1.00 83.13 C
ATOM 7 C4' A A 21 0.067 41.576 73.551 1.00 82.72 C
ATOM 8 O4' A A 21 -0.266 42.047 74.888 1.00 83.27 O
ATOM 9 C3' A A 21 0.230 42.854 72.739 1.00 82.37 C
ATOM 10 O3' A A 21 0.010 42.623 71.348 1.00 80.37 O
ATOM 11 C2' A A 21 -0.844 43.768 73.336 1.00 82.21 C
ATOM 12 O2' A A 21 -2.133 43.534 72.797 1.00 80.63 O
ATOM 13 C1' A A 21 -0.830 43.353 74.811 1.00 82.11 C
ATOM 14 N9 A A 21 -0.102 44.236 75.733 1.00 80.32 N
ATOM 15 C8 A A 21 0.975 43.889 76.508 1.00 80.02 C
ATOM 16 N7 A A 21 1.407 44.854 77.284 1.00 80.18 N
ATOM 17 C5 A A 21 0.566 45.917 76.997 1.00 78.63 C
ATOM 18 C6 A A 21 0.505 47.238 77.495 1.00 77.64 C
ATOM 19 N6 A A 21 1.333 47.720 78.427 1.00 73.93 N
ATOM 20 N1 A A 21 -0.448 48.053 76.995 1.00 78.35 N
ATOM 21 C2 A A 21 -1.280 47.566 76.062 1.00 80.86 C
ATOM 22 N3 A A 21 -1.324 46.344 75.517 1.00 80.96 N
ATOM 23 C4 A A 21 -0.364 45.557 76.033 1.00 79.66 C
ATOM 24 P A A 22 0.984 43.309 70.262 1.00 79.86 P
ATOM 25 OP1 A A 22 0.444 43.045 68.896 1.00 79.39 O
ATOM 26 OP2 A A 22 2.371 42.877 70.599 1.00 79.15 O
ATOM 27 O5' A A 22 0.849 44.874 70.551 1.00 74.69 O
TER
ATOM 1 O3' U B 19 4.941 37.603 81.216 1.00 78.77 O
ATOM 2 P G B 20 6.256 37.646 80.282 1.00 79.79 P
ATOM 3 OP1 G B 20 6.195 36.474 79.373 1.00 80.57 O
ATOM 4 OP2 G B 20 7.447 37.837 81.165 1.00 77.43 O
ATOM 5 O5' G B 20 6.064 38.956 79.398 1.00 77.94 O
ATOM 6 C5' G B 20 5.742 38.883 78.008 1.00 75.58 C
ATOM 7 C4' G B 20 4.474 39.653 77.750 1.00 74.60 C
ATOM 8 O4' G B 20 4.250 40.521 78.878 1.00 72.03 O
ATOM 9 C3' G B 20 4.448 40.579 76.538 1.00 75.93 C
ATOM 10 O3' G B 20 4.031 39.865 75.370 1.00 81.25 O
ATOM 11 C2' G B 20 3.407 41.631 76.929 1.00 73.73 C
ATOM 12 O2' G B 20 2.091 41.259 76.568 1.00 75.53 O
ATOM 13 C1' G B 20 3.505 41.643 78.459 1.00 69.49 C
ATOM 14 N9 G B 20 4.038 42.836 79.109 1.00 59.82 N
ATOM 15 C8 G B 20 3.610 44.133 78.946 1.00 56.58 C
ATOM 16 N7 G B 20 4.188 44.970 79.762 1.00 51.39 N
ATOM 17 C5 G B 20 5.072 44.183 80.487 1.00 50.31 C
ATOM 18 C6 G B 20 5.960 44.529 81.524 1.00 47.68 C
ATOM 19 O6 G B 20 6.142 45.632 82.037 1.00 50.28 O
ATOM 20 N1 G B 20 6.679 43.429 81.974 1.00 47.78 N
ATOM 21 C2 G B 20 6.557 42.153 81.491 1.00 49.95 C
ATOM 22 N2 G B 20 7.359 41.227 82.057 1.00 51.57 N
ATOM 23 N3 G B 20 5.717 41.810 80.528 1.00 50.58 N
ATOM 24 C4 G B 20 5.010 42.869 80.076 1.00 53.94 C
ATOM 25 P A B 21 3.889 40.633 73.958 1.00 84.24 P
ATOM 26 OP1 A B 21 3.875 39.606 72.885 1.00 85.21 O
ATOM 27 OP2 A B 21 4.930 41.693 73.941 1.00 85.27 O
ATOM 28 O5' A B 21 2.450 41.334 74.013 1.00 83.75 O
TER
ATOM 2 P A A 21 3.889 40.633 73.958 1.00 84.24 P
ATOM 3 OP1 A A 21 3.875 39.606 72.885 1.00 85.21 O
ATOM 4 OP2 A A 21 4.930 41.693 73.941 1.00 85.27 O
ATOM 5 O5' A A 21 2.450 41.334 74.013 1.00 83.75 O
ATOM 6 C5' A A 21 1.265 40.636 73.604 1.00 83.13 C
ATOM 7 C4' A A 21 0.067 41.576 73.551 1.00 82.72 C
ATOM 8 O4' A A 21 -0.266 42.047 74.888 1.00 83.27 O
ATOM 9 C3' A A 21 0.230 42.854 72.739 1.00 82.37 C
ATOM 10 O3' A A 21 0.010 42.623 71.348 1.00 80.37 O
ATOM 11 C2' A A 21 -0.844 43.768 73.336 1.00 82.21 C
ATOM 12 O2' A A 21 -2.133 43.534 72.797 1.00 80.63 O
ATOM 13 C1' A A 21 -0.830 43.353 74.811 1.00 82.11 C
ATOM 14 N9 A A 21 -0.102 44.236 75.733 1.00 80.32 N
ATOM 15 C8 A A 21 0.975 43.889 76.508 1.00 80.02 C
ATOM 16 N7 A A 21 1.407 44.854 77.284 1.00 80.18 N
ATOM 17 C5 A A 21 0.566 45.917 76.997 1.00 78.63 C
ATOM 18 C6 A A 21 0.505 47.238 77.495 1.00 77.64 C
ATOM 19 N6 A A 21 1.333 47.720 78.427 1.00 73.93 N
ATOM 20 N1 A A 21 -0.448 48.053 76.995 1.00 78.35 N
ATOM 21 C2 A A 21 -1.280 47.566 76.062 1.00 80.86 C
ATOM 22 N3 A A 21 -1.324 46.344 75.517 1.00 80.96 N
ATOM 23 C4 A A 21 -0.364 45.557 76.033 1.00 79.66 C
ATOM 24 P A A 22 0.984 43.309 70.262 1.00 79.86 P
ATOM 25 OP1 A A 22 0.444 43.045 68.896 1.00 79.39 O
ATOM 26 OP2 A A 22 2.371 42.877 70.599 1.00 79.15 O
ATOM 27 O5' A A 22 0.849 44.874 70.551 1.00 74.69 O
TER
ATOM 1 O3' U B 19 4.941 37.603 81.216 1.00 78.77 O
ATOM 2 P G B 20 6.256 37.646 80.282 1.00 79.79 P
ATOM 3 OP1 G B 20 6.195 36.474 79.373 1.00 80.57 O
ATOM 4 OP2 G B 20 7.447 37.837 81.165 1.00 77.43 O
ATOM 5 O5' G B 20 6.064 38.956 79.398 1.00 77.94 O
ATOM 6 C5' G B 20 5.742 38.883 78.008 1.00 75.58 C
ATOM 7 C4' G B 20 4.474 39.653 77.750 1.00 74.60 C
ATOM 8 O4' G B 20 4.250 40.521 78.878 1.00 72.03 O
ATOM 9 C3' G B 20 4.448 40.579 76.538 1.00 75.93 C
ATOM 10 O3' G B 20 4.031 39.865 75.370 1.00 81.25 O
ATOM 11 C2' G B 20 3.407 41.631 76.929 1.00 73.73 C
ATOM 12 O2' G B 20 2.091 41.259 76.568 1.00 75.53 O
ATOM 13 C1' G B 20 3.505 41.643 78.459 1.00 69.49 C
ATOM 14 N9 G B 20 4.038 42.836 79.109 1.00 59.82 N
ATOM 15 C8 G B 20 3.610 44.133 78.946 1.00 56.58 C
ATOM 16 N7 G B 20 4.188 44.970 79.762 1.00 51.39 N
ATOM 17 C5 G B 20 5.072 44.183 80.487 1.00 50.31 C
ATOM 18 C6 G B 20 5.960 44.529 81.524 1.00 47.68 C
ATOM 19 O6 G B 20 6.142 45.632 82.037 1.00 50.28 O
ATOM 20 N1 G B 20 6.679 43.429 81.974 1.00 47.78 N
ATOM 21 C2 G B 20 6.557 42.153 81.491 1.00 49.95 C
ATOM 22 N2 G B 20 7.359 41.227 82.057 1.00 51.57 N
ATOM 23 N3 G B 20 5.717 41.810 80.528 1.00 50.58 N
ATOM 24 C4 G B 20 5.010 42.869 80.076 1.00 53.94 C
ATOM 25 P A B 21 3.889 40.633 73.958 1.00 84.24 P
ATOM 26 OP1 A B 21 3.875 39.606 72.885 1.00 85.21 O
ATOM 27 OP2 A B 21 4.930 41.693 73.941 1.00 85.27 O
ATOM 28 O5' A B 21 2.450 41.334 74.013 1.00 83.75 O
TER
Atoms:
OP1: (3.875,39.606,72.885)
OP2: (4.930,41.693,73.941)
C3': (0.230,42.854,72.739)
C1': (-0.830,43.353,74.811)
C5': (1.265,40.636,73.604)
O4': (-0.266,42.047,74.888)
C8: (0.975,43.889,76.508)
O2': (-2.133,43.534,72.797)
C6: (0.505,47.238,77.495)
C5: (0.566,45.917,76.997)
C4: (-0.364,45.557,76.033)
P: (3.889,40.633,73.958)
C4': (0.067,41.576,73.551)
C2': (-0.844,43.768,73.336)
C2: (-1.280,47.566,76.062)
N1: (-0.448,48.053,76.995)
N3: (-1.324,46.344,75.517)
N6: (1.333,47.720,78.427)
N7: (1.407,44.854,77.284)
N9: (-0.102,44.236,75.733)
O5': (2.450,41.334,74.013)
O3': (0.010,42.623,71.348)
OP2: (4.930,41.693,73.941)
C3': (0.230,42.854,72.739)
C1': (-0.830,43.353,74.811)
C5': (1.265,40.636,73.604)
O4': (-0.266,42.047,74.888)
C8: (0.975,43.889,76.508)
O2': (-2.133,43.534,72.797)
C6: (0.505,47.238,77.495)
C5: (0.566,45.917,76.997)
C4: (-0.364,45.557,76.033)
P: (3.889,40.633,73.958)
C4': (0.067,41.576,73.551)
C2': (-0.844,43.768,73.336)
C2: (-1.280,47.566,76.062)
N1: (-0.448,48.053,76.995)
N3: (-1.324,46.344,75.517)
N6: (1.333,47.720,78.427)
N7: (1.407,44.854,77.284)
N9: (-0.102,44.236,75.733)
O5': (2.450,41.334,74.013)
O3': (0.010,42.623,71.348)
OP1: (6.195,36.474,79.373)
OP2: (7.447,37.837,81.165)
C3': (4.448,40.579,76.538)
C1': (3.505,41.643,78.459)
C5': (5.742,38.883,78.008)
O6: (6.142,45.632,82.037)
O4': (4.250,40.521,78.878)
C8: (3.610,44.133,78.946)
C2: (6.557,42.153,81.491)
C6: (5.960,44.529,81.524)
C5: (5.072,44.183,80.487)
C4: (5.010,42.869,80.076)
P: (6.256,37.646,80.282)
C4': (4.474,39.653,77.750)
C2': (3.407,41.631,76.929)
O2': (2.091,41.259,76.568)
N1: (6.679,43.429,81.974)
N2: (7.359,41.227,82.057)
N3: (5.717,41.810,80.528)
N7: (4.188,44.970,79.762)
N9: (4.038,42.836,79.109)
O5': (6.064,38.956,79.398)
O3': (4.031,39.865,75.370)
OP2: (7.447,37.837,81.165)
C3': (4.448,40.579,76.538)
C1': (3.505,41.643,78.459)
C5': (5.742,38.883,78.008)
O6: (6.142,45.632,82.037)
O4': (4.250,40.521,78.878)
C8: (3.610,44.133,78.946)
C2: (6.557,42.153,81.491)
C6: (5.960,44.529,81.524)
C5: (5.072,44.183,80.487)
C4: (5.010,42.869,80.076)
P: (6.256,37.646,80.282)
C4': (4.474,39.653,77.750)
C2': (3.407,41.631,76.929)
O2': (2.091,41.259,76.568)
N1: (6.679,43.429,81.974)
N2: (7.359,41.227,82.057)
N3: (5.717,41.810,80.528)
N7: (4.188,44.970,79.762)
N9: (4.038,42.836,79.109)
O5': (6.064,38.956,79.398)
O3': (4.031,39.865,75.370)
Image (generated by PyMOL):