ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0507:0506

Extra

PDB:
ATOM 1 O3' G A 506 24.759 139.820 70.120 1.00 42.54 O
ATOM 2 P A A 507 24.590 139.818 71.727 1.00 41.51 P
ATOM 3 OP1 A A 507 23.192 140.168 72.078 1.00 37.50 O
ATOM 4 OP2 A A 507 25.710 140.619 72.293 1.00 39.06 O
ATOM 5 O5' A A 507 24.871 138.297 72.116 1.00 40.11 O
ATOM 6 C5' A A 507 23.925 137.247 71.822 1.00 40.67 C
ATOM 7 C4' A A 507 24.517 135.904 72.196 1.00 42.36 C
ATOM 8 O4' A A 507 25.439 135.453 71.173 1.00 41.72 O
ATOM 9 C3' A A 507 25.318 135.943 73.484 1.00 42.64 C
ATOM 10 O3' A A 507 24.482 135.698 74.603 1.00 42.66 O
ATOM 11 C2' A A 507 26.378 134.874 73.269 1.00 42.45 C
ATOM 12 O2' A A 507 25.884 133.587 73.563 1.00 42.68 O
ATOM 13 C1' A A 507 26.644 135.007 71.767 1.00 42.29 C
ATOM 14 N9 A A 507 27.680 135.988 71.415 1.00 43.63 N
ATOM 15 C8 A A 507 27.473 137.212 70.813 1.00 42.72 C
ATOM 16 N7 A A 507 28.573 137.880 70.574 1.00 42.64 N
ATOM 17 C5 A A 507 29.577 137.053 71.054 1.00 42.93 C
ATOM 18 C6 A A 507 30.977 137.187 71.080 1.00 42.90 C
ATOM 19 N6 A A 507 31.630 138.245 70.591 1.00 40.24 N
ATOM 20 N1 A A 507 31.693 136.180 71.626 1.00 43.05 N
ATOM 21 C2 A A 507 31.038 135.118 72.108 1.00 42.95 C
ATOM 22 N3 A A 507 29.727 134.876 72.140 1.00 42.18 N
ATOM 23 C4 A A 507 29.043 135.889 71.587 1.00 42.34 C
ATOM 24 P A A 508 24.771 136.456 75.986 1.00 43.62 P
ATOM 25 OP1 A A 508 23.639 136.142 76.893 1.00 42.66 O
ATOM 26 OP2 A A 508 25.115 137.877 75.707 1.00 41.83 O
ATOM 27 O5' A A 508 26.080 135.731 76.532 1.00 41.52 O
TER

ATOM 1 O3' U B 505 20.794 140.709 64.978 1.00 40.12 O
ATOM 2 P G B 506 20.484 141.457 66.383 1.00 44.97 P
ATOM 3 OP1 G B 506 19.334 140.756 67.005 1.00 38.63 O
ATOM 4 OP2 G B 506 20.415 142.931 66.197 1.00 40.39 O
ATOM 5 O5' G B 506 21.778 141.136 67.259 1.00 44.71 O
ATOM 6 C5' G B 506 22.195 139.776 67.478 1.00 44.08 C
ATOM 7 C4' G B 506 23.602 139.738 68.020 1.00 42.99 C
ATOM 8 O4' G B 506 24.534 140.237 67.014 1.00 43.50 O
ATOM 9 C3' G B 506 23.852 140.558 69.290 1.00 42.69 C
ATOM 10 O3' G B 506 24.759 139.820 70.120 1.00 42.54 O
ATOM 11 C2' G B 506 24.568 141.787 68.739 1.00 43.56 C
ATOM 12 O2' G B 506 25.404 142.500 69.623 1.00 44.59 O
ATOM 13 C1' G B 506 25.404 141.142 67.643 1.00 44.07 C
ATOM 14 N9 G B 506 26.021 142.064 66.695 1.00 43.26 N
ATOM 15 C8 G B 506 25.541 143.277 66.255 1.00 41.26 C
ATOM 16 N7 G B 506 26.433 143.969 65.601 1.00 41.69 N
ATOM 17 C5 G B 506 27.549 143.144 65.565 1.00 43.58 C
ATOM 18 C6 G B 506 28.847 143.370 65.039 1.00 43.54 C
ATOM 19 O6 G B 506 29.291 144.382 64.505 1.00 46.81 O
ATOM 20 N1 G B 506 29.669 142.258 65.202 1.00 43.55 N
ATOM 21 C2 G B 506 29.297 141.080 65.798 1.00 42.25 C
ATOM 22 N2 G B 506 30.228 140.119 65.844 1.00 41.64 N
ATOM 23 N3 G B 506 28.097 140.863 66.313 1.00 43.44 N
ATOM 24 C4 G B 506 27.283 141.935 66.172 1.00 43.92 C
ATOM 25 P A B 507 24.590 139.818 71.727 1.00 41.51 P
ATOM 26 OP1 A B 507 23.192 140.168 72.078 1.00 37.50 O
ATOM 27 OP2 A B 507 25.710 140.619 72.293 1.00 39.06 O
ATOM 28 O5' A B 507 24.871 138.297 72.116 1.00 40.11 O
TER

Atoms:
OP1: (23.192,140.168,72.078)
OP2: (25.710,140.619,72.293)
C3': (25.318,135.943,73.484)
C1': (26.644,135.007,71.767)
C5': (23.925,137.247,71.822)
O4': (25.439,135.453,71.173)
C8: (27.473,137.212,70.813)
O2': (25.884,133.587,73.563)
C6: (30.977,137.187,71.080)
C5: (29.577,137.053,71.054)
C4: (29.043,135.889,71.587)
P: (24.590,139.818,71.727)
C4': (24.517,135.904,72.196)
C2': (26.378,134.874,73.269)
C2: (31.038,135.118,72.108)
N1: (31.693,136.180,71.626)
N3: (29.727,134.876,72.140)
N6: (31.630,138.245,70.591)
N7: (28.573,137.880,70.574)
N9: (27.680,135.988,71.415)
O5': (24.871,138.297,72.116)
O3': (24.482,135.698,74.603)
OP1: (19.334,140.756,67.005)
OP2: (20.415,142.931,66.197)
C3': (23.852,140.558,69.290)
C1': (25.404,141.142,67.643)
C5': (22.195,139.776,67.478)
O6: (29.291,144.382,64.505)
O4': (24.534,140.237,67.014)
C8: (25.541,143.277,66.255)
C2: (29.297,141.080,65.798)
C6: (28.847,143.370,65.039)
C5: (27.549,143.144,65.565)
C4: (27.283,141.935,66.172)
P: (20.484,141.457,66.383)
C4': (23.602,139.738,68.020)
C2': (24.568,141.787,68.739)
O2': (25.404,142.500,69.623)
N1: (29.669,142.258,65.202)
N2: (30.228,140.119,65.844)
N3: (28.097,140.863,66.313)
N7: (26.433,143.969,65.601)
N9: (26.021,142.064,66.695)
O5': (21.778,141.136,67.259)
O3': (24.759,139.820,70.120)
Image (generated by PyMOL):
PyMOL image
show in jmol