Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:I15:I14
Extra
PDB:
ATOM 1 O3' C A 14 3.217 -8.851 64.460 1.00 60.75 O
ATOM 2 P U A 15 1.624 -8.837 64.312 1.00 58.28 P
ATOM 3 OP1 U A 15 1.311 -10.285 64.463 1.00 59.64 O
ATOM 4 OP2 U A 15 1.270 -8.150 63.041 1.00 57.08 O
ATOM 5 O5' U A 15 1.100 -7.977 65.554 1.00 57.42 O
ATOM 6 C5' U A 15 1.291 -8.315 66.917 1.00 57.29 C
ATOM 7 C4' U A 15 0.840 -7.185 67.811 1.00 55.36 C
ATOM 8 O4' U A 15 1.620 -5.991 67.539 1.00 55.18 O
ATOM 9 C3' U A 15 -0.596 -6.719 67.640 1.00 53.27 C
ATOM 10 O3' U A 15 -1.505 -7.521 68.364 1.00 53.37 O
ATOM 11 C2' U A 15 -0.550 -5.278 68.133 1.00 51.53 C
ATOM 12 O2' U A 15 -0.577 -5.216 69.547 1.00 51.11 O
ATOM 13 C1' U A 15 0.829 -4.833 67.672 1.00 52.81 C
ATOM 14 N1 U A 15 0.692 -4.225 66.346 1.00 52.51 N
ATOM 15 C2 U A 15 0.207 -2.935 66.276 1.00 50.33 C
ATOM 16 O2 U A 15 -0.090 -2.293 67.270 1.00 49.27 O
ATOM 17 N3 U A 15 0.086 -2.433 65.005 1.00 50.00 N
ATOM 18 C4 U A 15 0.398 -3.089 63.837 1.00 51.09 C
ATOM 19 O4 U A 15 0.241 -2.523 62.768 1.00 51.36 O
ATOM 20 C5 U A 15 0.891 -4.414 63.993 1.00 52.81 C
ATOM 21 C6 U A 15 1.015 -4.928 65.215 1.00 53.35 C
ATOM 22 P A A 16 -2.988 -7.753 67.809 1.00 53.47 P
ATOM 23 OP1 A A 16 -3.684 -8.715 68.706 1.00 54.42 O
ATOM 24 OP2 A A 16 -2.784 -8.069 66.366 1.00 54.39 O
ATOM 25 O5' A A 16 -3.669 -6.331 68.007 1.00 52.03 O
TER
ATOM 1 O3' G B 13 6.895 -6.870 60.039 1.00 66.01 O
ATOM 2 P C B 14 5.315 -7.178 59.912 1.00 62.36 P
ATOM 3 OP1 C B 14 5.126 -8.408 59.100 1.00 63.08 O
ATOM 4 OP2 C B 14 4.862 -5.859 59.368 1.00 59.86 O
ATOM 5 O5' C B 14 4.775 -7.411 61.402 1.00 61.85 O
ATOM 6 C5' C B 14 5.453 -8.332 62.236 1.00 64.67 C
ATOM 7 C4' C B 14 5.353 -7.956 63.689 1.00 64.41 C
ATOM 8 O4' C B 14 6.043 -6.709 63.937 1.00 64.99 O
ATOM 9 C3' C B 14 3.959 -7.682 64.211 1.00 60.95 C
ATOM 10 O3' C B 14 3.217 -8.851 64.460 1.00 60.75 O
ATOM 11 C2' C B 14 4.258 -6.890 65.470 1.00 61.01 C
ATOM 12 O2' C B 14 4.791 -7.730 66.479 1.00 63.62 O
ATOM 13 C1' C B 14 5.376 -5.995 64.957 1.00 62.73 C
ATOM 14 N1 C B 14 4.762 -4.748 64.432 1.00 59.69 N
ATOM 15 C2 C B 14 4.382 -3.762 65.347 1.00 58.05 C
ATOM 16 O2 C B 14 4.589 -3.975 66.549 1.00 59.09 O
ATOM 17 N3 C B 14 3.810 -2.615 64.921 1.00 55.61 N
ATOM 18 C4 C B 14 3.611 -2.436 63.622 1.00 54.83 C
ATOM 19 N4 C B 14 3.050 -1.295 63.227 1.00 52.71 N
ATOM 20 C5 C B 14 3.977 -3.420 62.663 1.00 56.25 C
ATOM 21 C6 C B 14 4.540 -4.551 63.102 1.00 58.62 C
ATOM 22 P U B 15 1.624 -8.837 64.312 1.00 58.28 P
ATOM 23 OP1 U B 15 1.311 -10.285 64.463 1.00 59.64 O
ATOM 24 OP2 U B 15 1.270 -8.150 63.041 1.00 57.08 O
ATOM 25 O5' U B 15 1.100 -7.977 65.554 1.00 57.42 O
TER
ATOM 2 P U A 15 1.624 -8.837 64.312 1.00 58.28 P
ATOM 3 OP1 U A 15 1.311 -10.285 64.463 1.00 59.64 O
ATOM 4 OP2 U A 15 1.270 -8.150 63.041 1.00 57.08 O
ATOM 5 O5' U A 15 1.100 -7.977 65.554 1.00 57.42 O
ATOM 6 C5' U A 15 1.291 -8.315 66.917 1.00 57.29 C
ATOM 7 C4' U A 15 0.840 -7.185 67.811 1.00 55.36 C
ATOM 8 O4' U A 15 1.620 -5.991 67.539 1.00 55.18 O
ATOM 9 C3' U A 15 -0.596 -6.719 67.640 1.00 53.27 C
ATOM 10 O3' U A 15 -1.505 -7.521 68.364 1.00 53.37 O
ATOM 11 C2' U A 15 -0.550 -5.278 68.133 1.00 51.53 C
ATOM 12 O2' U A 15 -0.577 -5.216 69.547 1.00 51.11 O
ATOM 13 C1' U A 15 0.829 -4.833 67.672 1.00 52.81 C
ATOM 14 N1 U A 15 0.692 -4.225 66.346 1.00 52.51 N
ATOM 15 C2 U A 15 0.207 -2.935 66.276 1.00 50.33 C
ATOM 16 O2 U A 15 -0.090 -2.293 67.270 1.00 49.27 O
ATOM 17 N3 U A 15 0.086 -2.433 65.005 1.00 50.00 N
ATOM 18 C4 U A 15 0.398 -3.089 63.837 1.00 51.09 C
ATOM 19 O4 U A 15 0.241 -2.523 62.768 1.00 51.36 O
ATOM 20 C5 U A 15 0.891 -4.414 63.993 1.00 52.81 C
ATOM 21 C6 U A 15 1.015 -4.928 65.215 1.00 53.35 C
ATOM 22 P A A 16 -2.988 -7.753 67.809 1.00 53.47 P
ATOM 23 OP1 A A 16 -3.684 -8.715 68.706 1.00 54.42 O
ATOM 24 OP2 A A 16 -2.784 -8.069 66.366 1.00 54.39 O
ATOM 25 O5' A A 16 -3.669 -6.331 68.007 1.00 52.03 O
TER
ATOM 1 O3' G B 13 6.895 -6.870 60.039 1.00 66.01 O
ATOM 2 P C B 14 5.315 -7.178 59.912 1.00 62.36 P
ATOM 3 OP1 C B 14 5.126 -8.408 59.100 1.00 63.08 O
ATOM 4 OP2 C B 14 4.862 -5.859 59.368 1.00 59.86 O
ATOM 5 O5' C B 14 4.775 -7.411 61.402 1.00 61.85 O
ATOM 6 C5' C B 14 5.453 -8.332 62.236 1.00 64.67 C
ATOM 7 C4' C B 14 5.353 -7.956 63.689 1.00 64.41 C
ATOM 8 O4' C B 14 6.043 -6.709 63.937 1.00 64.99 O
ATOM 9 C3' C B 14 3.959 -7.682 64.211 1.00 60.95 C
ATOM 10 O3' C B 14 3.217 -8.851 64.460 1.00 60.75 O
ATOM 11 C2' C B 14 4.258 -6.890 65.470 1.00 61.01 C
ATOM 12 O2' C B 14 4.791 -7.730 66.479 1.00 63.62 O
ATOM 13 C1' C B 14 5.376 -5.995 64.957 1.00 62.73 C
ATOM 14 N1 C B 14 4.762 -4.748 64.432 1.00 59.69 N
ATOM 15 C2 C B 14 4.382 -3.762 65.347 1.00 58.05 C
ATOM 16 O2 C B 14 4.589 -3.975 66.549 1.00 59.09 O
ATOM 17 N3 C B 14 3.810 -2.615 64.921 1.00 55.61 N
ATOM 18 C4 C B 14 3.611 -2.436 63.622 1.00 54.83 C
ATOM 19 N4 C B 14 3.050 -1.295 63.227 1.00 52.71 N
ATOM 20 C5 C B 14 3.977 -3.420 62.663 1.00 56.25 C
ATOM 21 C6 C B 14 4.540 -4.551 63.102 1.00 58.62 C
ATOM 22 P U B 15 1.624 -8.837 64.312 1.00 58.28 P
ATOM 23 OP1 U B 15 1.311 -10.285 64.463 1.00 59.64 O
ATOM 24 OP2 U B 15 1.270 -8.150 63.041 1.00 57.08 O
ATOM 25 O5' U B 15 1.100 -7.977 65.554 1.00 57.42 O
TER
Atoms:
C4: (0.398,-3.089,63.837)
N3: (0.086,-2.433,65.005)
OP1: (1.311,-10.285,64.463)
OP2: (1.270,-8.150,63.041)
C2: (0.207,-2.935,66.276)
C1': (0.829,-4.833,67.672)
C3': (-0.596,-6.719,67.640)
O5': (1.100,-7.977,65.554)
O4': (1.620,-5.991,67.539)
C5': (1.291,-8.315,66.917)
P: (1.624,-8.837,64.312)
C4': (0.840,-7.185,67.811)
C2': (-0.550,-5.278,68.133)
O2': (-0.577,-5.216,69.547)
N1: (0.692,-4.225,66.346)
O4: (0.241,-2.523,62.768)
O2: (-0.090,-2.293,67.270)
C6: (1.015,-4.928,65.215)
C5: (0.891,-4.414,63.993)
O3': (-1.505,-7.521,68.364)
N3: (0.086,-2.433,65.005)
OP1: (1.311,-10.285,64.463)
OP2: (1.270,-8.150,63.041)
C2: (0.207,-2.935,66.276)
C1': (0.829,-4.833,67.672)
C3': (-0.596,-6.719,67.640)
O5': (1.100,-7.977,65.554)
O4': (1.620,-5.991,67.539)
C5': (1.291,-8.315,66.917)
P: (1.624,-8.837,64.312)
C4': (0.840,-7.185,67.811)
C2': (-0.550,-5.278,68.133)
O2': (-0.577,-5.216,69.547)
N1: (0.692,-4.225,66.346)
O4: (0.241,-2.523,62.768)
O2: (-0.090,-2.293,67.270)
C6: (1.015,-4.928,65.215)
C5: (0.891,-4.414,63.993)
O3': (-1.505,-7.521,68.364)
C2: (4.382,-3.762,65.347)
OP1: (5.126,-8.408,59.100)
OP2: (4.862,-5.859,59.368)
C4: (3.611,-2.436,63.622)
O5': (4.775,-7.411,61.402)
C3': (3.959,-7.682,64.211)
C1': (5.376,-5.995,64.957)
O4': (6.043,-6.709,63.937)
C5': (5.453,-8.332,62.236)
P: (5.315,-7.178,59.912)
O2: (4.589,-3.975,66.549)
C4': (5.353,-7.956,63.689)
C2': (4.258,-6.890,65.470)
O2': (4.791,-7.730,66.479)
N1: (4.762,-4.748,64.432)
N3: (3.810,-2.615,64.921)
N4: (3.050,-1.295,63.227)
C6: (4.540,-4.551,63.102)
C5: (3.977,-3.420,62.663)
O3': (3.217,-8.851,64.460)
OP1: (5.126,-8.408,59.100)
OP2: (4.862,-5.859,59.368)
C4: (3.611,-2.436,63.622)
O5': (4.775,-7.411,61.402)
C3': (3.959,-7.682,64.211)
C1': (5.376,-5.995,64.957)
O4': (6.043,-6.709,63.937)
C5': (5.453,-8.332,62.236)
P: (5.315,-7.178,59.912)
O2: (4.589,-3.975,66.549)
C4': (5.353,-7.956,63.689)
C2': (4.258,-6.890,65.470)
O2': (4.791,-7.730,66.479)
N1: (4.762,-4.748,64.432)
N3: (3.810,-2.615,64.921)
N4: (3.050,-1.295,63.227)
C6: (4.540,-4.551,63.102)
C5: (3.977,-3.420,62.663)
O3': (3.217,-8.851,64.460)
Image (generated by PyMOL):