ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ7:0507:0506

Extra

PDB:
ATOM 1 O3' G A 506 24.475 140.182 69.644 1.00 40.12 O
ATOM 2 P A A 507 24.279 140.230 71.234 1.00 35.27 P
ATOM 3 OP1 A A 507 22.858 140.519 71.516 1.00 37.67 O
ATOM 4 OP2 A A 507 25.323 141.116 71.794 1.00 37.32 O
ATOM 5 O5' A A 507 24.588 138.733 71.678 1.00 38.04 O
ATOM 6 C5' A A 507 23.651 137.671 71.406 1.00 38.71 C
ATOM 7 C4' A A 507 24.259 136.329 71.757 1.00 40.24 C
ATOM 8 O4' A A 507 25.158 135.865 70.717 1.00 38.65 O
ATOM 9 C3' A A 507 25.061 136.308 73.045 1.00 40.31 C
ATOM 10 O3' A A 507 24.224 136.053 74.159 1.00 41.53 O
ATOM 11 C2' A A 507 26.081 135.210 72.791 1.00 41.57 C
ATOM 12 O2' A A 507 25.550 133.917 73.004 1.00 43.84 O
ATOM 13 C1' A A 507 26.370 135.417 71.301 1.00 40.99 C
ATOM 14 N9 A A 507 27.398 136.427 71.022 1.00 41.58 N
ATOM 15 C8 A A 507 27.200 137.653 70.439 1.00 40.77 C
ATOM 16 N7 A A 507 28.295 138.340 70.265 1.00 40.75 N
ATOM 17 C5 A A 507 29.287 137.522 70.775 1.00 41.83 C
ATOM 18 C6 A A 507 30.676 137.681 70.873 1.00 43.07 C
ATOM 19 N6 A A 507 31.324 138.767 70.435 1.00 40.44 N
ATOM 20 N1 A A 507 31.386 136.676 71.437 1.00 41.91 N
ATOM 21 C2 A A 507 30.728 135.593 71.869 1.00 40.56 C
ATOM 22 N3 A A 507 29.425 135.329 71.833 1.00 40.64 N
ATOM 23 C4 A A 507 28.751 136.344 71.261 1.00 41.92 C
ATOM 24 P A A 508 24.493 136.813 75.547 1.00 40.19 P
ATOM 25 OP1 A A 508 23.334 136.540 76.414 1.00 39.02 O
ATOM 26 OP2 A A 508 24.865 138.221 75.262 1.00 41.22 O
ATOM 27 O5' A A 508 25.787 136.077 76.121 1.00 41.52 O
TER

ATOM 1 O3' U B 505 20.480 141.020 64.615 1.00 42.21 O
ATOM 2 P G B 506 20.190 141.768 65.997 1.00 45.39 P
ATOM 3 OP1 G B 506 19.045 141.078 66.643 1.00 43.36 O
ATOM 4 OP2 G B 506 20.118 143.224 65.730 1.00 45.21 O
ATOM 5 O5' G B 506 21.492 141.460 66.854 1.00 46.84 O
ATOM 6 C5' G B 506 21.967 140.109 66.974 1.00 45.85 C
ATOM 7 C4' G B 506 23.375 140.093 67.501 1.00 42.97 C
ATOM 8 O4' G B 506 24.270 140.698 66.515 1.00 41.44 O
ATOM 9 C3' G B 506 23.575 140.887 68.795 1.00 40.17 C
ATOM 10 O3' G B 506 24.475 140.182 69.644 1.00 40.12 O
ATOM 11 C2' G B 506 24.256 142.151 68.292 1.00 38.56 C
ATOM 12 O2' G B 506 25.015 142.835 69.260 1.00 35.00 O
ATOM 13 C1' G B 506 25.138 141.562 67.197 1.00 39.94 C
ATOM 14 N9 G B 506 25.721 142.547 66.294 1.00 40.29 N
ATOM 15 C8 G B 506 25.165 143.737 65.890 1.00 42.28 C
ATOM 16 N7 G B 506 26.017 144.517 65.282 1.00 43.76 N
ATOM 17 C5 G B 506 27.189 143.774 65.237 1.00 42.26 C
ATOM 18 C6 G B 506 28.479 144.117 64.746 1.00 41.76 C
ATOM 19 O6 G B 506 28.861 145.195 64.273 1.00 40.56 O
ATOM 20 N1 G B 506 29.373 143.057 64.875 1.00 41.04 N
ATOM 21 C2 G B 506 29.070 141.834 65.419 1.00 41.04 C
ATOM 22 N2 G B 506 30.061 140.932 65.436 1.00 41.20 N
ATOM 23 N3 G B 506 27.881 141.515 65.908 1.00 41.55 N
ATOM 24 C4 G B 506 26.998 142.527 65.791 1.00 40.81 C
ATOM 25 P A B 507 24.279 140.230 71.234 1.00 35.27 P
ATOM 26 OP1 A B 507 22.858 140.519 71.516 1.00 37.67 O
ATOM 27 OP2 A B 507 25.323 141.116 71.794 1.00 37.32 O
ATOM 28 O5' A B 507 24.588 138.733 71.678 1.00 38.04 O
TER

Atoms:
OP1: (22.858,140.519,71.516)
OP2: (25.323,141.116,71.794)
C3': (25.061,136.308,73.045)
C1': (26.370,135.417,71.301)
C5': (23.651,137.671,71.406)
O4': (25.158,135.865,70.717)
C8: (27.200,137.653,70.439)
O2': (25.550,133.917,73.004)
C6: (30.676,137.681,70.873)
C5: (29.287,137.522,70.775)
C4: (28.751,136.344,71.261)
P: (24.279,140.230,71.234)
C4': (24.259,136.329,71.757)
C2': (26.081,135.210,72.791)
C2: (30.728,135.593,71.869)
N1: (31.386,136.676,71.437)
N3: (29.425,135.329,71.833)
N6: (31.324,138.767,70.435)
N7: (28.295,138.340,70.265)
N9: (27.398,136.427,71.022)
O5': (24.588,138.733,71.678)
O3': (24.224,136.053,74.159)
OP1: (19.045,141.078,66.643)
OP2: (20.118,143.224,65.730)
C3': (23.575,140.887,68.795)
C1': (25.138,141.562,67.197)
C5': (21.967,140.109,66.974)
O6: (28.861,145.195,64.273)
O4': (24.270,140.698,66.515)
C8: (25.165,143.737,65.890)
C2: (29.070,141.834,65.419)
C6: (28.479,144.117,64.746)
C5: (27.189,143.774,65.237)
C4: (26.998,142.527,65.791)
P: (20.190,141.768,65.997)
C4': (23.375,140.093,67.501)
C2': (24.256,142.151,68.292)
O2': (25.015,142.835,69.260)
N1: (29.373,143.057,64.875)
N2: (30.061,140.932,65.436)
N3: (27.881,141.515,65.908)
N7: (26.017,144.517,65.282)
N9: (25.721,142.547,66.294)
O5': (21.492,141.460,66.854)
O3': (24.475,140.182,69.644)
Image (generated by PyMOL):
PyMOL image
show in jmol