Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW5:A13:A12
Extra
PDB:
ATOM 1 O3' G A 12 0.184 34.762 -5.733 1.00 9.96 O
ATOM 2 P A A 13 1.741 34.445 -5.512 1.00 11.20 P
ATOM 3 OP1 A A 13 1.836 33.187 -4.740 1.00 13.11 O
ATOM 4 OP2 A A 13 2.435 35.656 -5.023 1.00 12.19 O
ATOM 5 O5' A A 13 2.194 34.169 -7.022 1.00 11.24 O
ATOM 6 C5' A A 13 3.570 34.086 -7.361 1.00 12.43 C
ATOM 7 C4' A A 13 3.820 32.896 -8.267 1.00 13.06 C
ATOM 8 O4' A A 13 3.452 31.684 -7.560 1.00 14.06 O
ATOM 9 C3' A A 13 2.993 32.852 -9.543 1.00 12.53 C
ATOM 10 O3' A A 13 3.608 33.627 -10.563 1.00 12.21 O
ATOM 11 C2' A A 13 3.054 31.363 -9.865 1.00 13.47 C
ATOM 12 O2' A A 13 4.312 30.973 -10.379 1.00 15.03 O
ATOM 13 C1' A A 13 2.896 30.758 -8.477 1.00 13.97 C
ATOM 14 N9 A A 13 1.528 30.438 -8.069 1.00 14.75 N
ATOM 15 C8 A A 13 0.755 31.099 -7.156 1.00 15.21 C
ATOM 16 N7 A A 13 -0.431 30.562 -6.981 1.00 15.87 N
ATOM 17 C5 A A 13 -0.433 29.470 -7.833 1.00 15.85 C
ATOM 18 C6 A A 13 -1.397 28.480 -8.115 1.00 17.22 C
ATOM 19 N6 A A 13 -2.603 28.440 -7.539 1.00 18.91 N
ATOM 20 N1 A A 13 -1.077 27.531 -9.017 1.00 17.94 N
ATOM 21 C2 A A 13 0.129 27.573 -9.592 1.00 17.70 C
ATOM 22 N3 A A 13 1.115 28.448 -9.407 1.00 16.82 N
ATOM 23 C4 A A 13 0.768 29.379 -8.507 1.00 15.59 C
ATOM 24 P G A 14 2.841 34.856 -11.249 1.00 10.32 P
ATOM 25 OP1 G A 14 3.867 35.634 -11.979 1.00 12.61 O
ATOM 26 OP2 G A 14 1.996 35.517 -10.233 1.00 10.94 O
ATOM 27 O5' G A 14 1.862 34.166 -12.306 1.00 9.52 O
TER
ATOM 1 O3' C B 11 -0.096 40.632 -4.115 1.00 9.01 O
ATOM 2 P G B 12 1.012 39.483 -4.235 1.00 9.66 P
ATOM 3 OP1 G B 12 1.197 38.940 -2.870 1.00 11.13 O
ATOM 4 OP2 G B 12 2.170 39.993 -5.005 1.00 10.10 O
ATOM 5 O5' G B 12 0.298 38.395 -5.163 1.00 9.69 O
ATOM 6 C5' G B 12 -0.760 37.595 -4.664 1.00 10.13 C
ATOM 7 C4' G B 12 -1.274 36.703 -5.776 1.00 9.16 C
ATOM 8 O4' G B 12 -1.848 37.527 -6.821 1.00 8.79 O
ATOM 9 C3' G B 12 -0.206 35.904 -6.503 1.00 9.03 C
ATOM 10 O3' G B 12 0.184 34.762 -5.733 1.00 9.96 O
ATOM 11 C2' G B 12 -0.961 35.569 -7.791 1.00 8.78 C
ATOM 12 O2' G B 12 -1.847 34.481 -7.635 1.00 9.24 O
ATOM 13 C1' G B 12 -1.703 36.885 -8.067 1.00 8.55 C
ATOM 14 N9 G B 12 -0.838 37.660 -8.937 1.00 8.21 N
ATOM 15 C8 G B 12 0.039 38.675 -8.642 1.00 9.02 C
ATOM 16 N7 G B 12 0.710 39.086 -9.687 1.00 9.36 N
ATOM 17 C5 G B 12 0.260 38.277 -10.725 1.00 8.71 C
ATOM 18 C6 G B 12 0.615 38.225 -12.092 1.00 8.81 C
ATOM 19 O6 G B 12 1.435 38.923 -12.698 1.00 10.69 O
ATOM 20 N1 G B 12 -0.094 37.234 -12.771 1.00 8.62 N
ATOM 21 C2 G B 12 -1.027 36.399 -12.207 1.00 7.76 C
ATOM 22 N2 G B 12 -1.613 35.496 -13.005 1.00 8.49 N
ATOM 23 N3 G B 12 -1.367 36.442 -10.932 1.00 7.99 N
ATOM 24 C4 G B 12 -0.681 37.392 -10.266 1.00 8.34 C
ATOM 25 P A B 13 1.741 34.445 -5.512 1.00 11.20 P
ATOM 26 OP1 A B 13 1.836 33.187 -4.740 1.00 13.11 O
ATOM 27 OP2 A B 13 2.435 35.656 -5.023 1.00 12.19 O
ATOM 28 O5' A B 13 2.194 34.169 -7.022 1.00 11.24 O
TER
ATOM 2 P A A 13 1.741 34.445 -5.512 1.00 11.20 P
ATOM 3 OP1 A A 13 1.836 33.187 -4.740 1.00 13.11 O
ATOM 4 OP2 A A 13 2.435 35.656 -5.023 1.00 12.19 O
ATOM 5 O5' A A 13 2.194 34.169 -7.022 1.00 11.24 O
ATOM 6 C5' A A 13 3.570 34.086 -7.361 1.00 12.43 C
ATOM 7 C4' A A 13 3.820 32.896 -8.267 1.00 13.06 C
ATOM 8 O4' A A 13 3.452 31.684 -7.560 1.00 14.06 O
ATOM 9 C3' A A 13 2.993 32.852 -9.543 1.00 12.53 C
ATOM 10 O3' A A 13 3.608 33.627 -10.563 1.00 12.21 O
ATOM 11 C2' A A 13 3.054 31.363 -9.865 1.00 13.47 C
ATOM 12 O2' A A 13 4.312 30.973 -10.379 1.00 15.03 O
ATOM 13 C1' A A 13 2.896 30.758 -8.477 1.00 13.97 C
ATOM 14 N9 A A 13 1.528 30.438 -8.069 1.00 14.75 N
ATOM 15 C8 A A 13 0.755 31.099 -7.156 1.00 15.21 C
ATOM 16 N7 A A 13 -0.431 30.562 -6.981 1.00 15.87 N
ATOM 17 C5 A A 13 -0.433 29.470 -7.833 1.00 15.85 C
ATOM 18 C6 A A 13 -1.397 28.480 -8.115 1.00 17.22 C
ATOM 19 N6 A A 13 -2.603 28.440 -7.539 1.00 18.91 N
ATOM 20 N1 A A 13 -1.077 27.531 -9.017 1.00 17.94 N
ATOM 21 C2 A A 13 0.129 27.573 -9.592 1.00 17.70 C
ATOM 22 N3 A A 13 1.115 28.448 -9.407 1.00 16.82 N
ATOM 23 C4 A A 13 0.768 29.379 -8.507 1.00 15.59 C
ATOM 24 P G A 14 2.841 34.856 -11.249 1.00 10.32 P
ATOM 25 OP1 G A 14 3.867 35.634 -11.979 1.00 12.61 O
ATOM 26 OP2 G A 14 1.996 35.517 -10.233 1.00 10.94 O
ATOM 27 O5' G A 14 1.862 34.166 -12.306 1.00 9.52 O
TER
ATOM 1 O3' C B 11 -0.096 40.632 -4.115 1.00 9.01 O
ATOM 2 P G B 12 1.012 39.483 -4.235 1.00 9.66 P
ATOM 3 OP1 G B 12 1.197 38.940 -2.870 1.00 11.13 O
ATOM 4 OP2 G B 12 2.170 39.993 -5.005 1.00 10.10 O
ATOM 5 O5' G B 12 0.298 38.395 -5.163 1.00 9.69 O
ATOM 6 C5' G B 12 -0.760 37.595 -4.664 1.00 10.13 C
ATOM 7 C4' G B 12 -1.274 36.703 -5.776 1.00 9.16 C
ATOM 8 O4' G B 12 -1.848 37.527 -6.821 1.00 8.79 O
ATOM 9 C3' G B 12 -0.206 35.904 -6.503 1.00 9.03 C
ATOM 10 O3' G B 12 0.184 34.762 -5.733 1.00 9.96 O
ATOM 11 C2' G B 12 -0.961 35.569 -7.791 1.00 8.78 C
ATOM 12 O2' G B 12 -1.847 34.481 -7.635 1.00 9.24 O
ATOM 13 C1' G B 12 -1.703 36.885 -8.067 1.00 8.55 C
ATOM 14 N9 G B 12 -0.838 37.660 -8.937 1.00 8.21 N
ATOM 15 C8 G B 12 0.039 38.675 -8.642 1.00 9.02 C
ATOM 16 N7 G B 12 0.710 39.086 -9.687 1.00 9.36 N
ATOM 17 C5 G B 12 0.260 38.277 -10.725 1.00 8.71 C
ATOM 18 C6 G B 12 0.615 38.225 -12.092 1.00 8.81 C
ATOM 19 O6 G B 12 1.435 38.923 -12.698 1.00 10.69 O
ATOM 20 N1 G B 12 -0.094 37.234 -12.771 1.00 8.62 N
ATOM 21 C2 G B 12 -1.027 36.399 -12.207 1.00 7.76 C
ATOM 22 N2 G B 12 -1.613 35.496 -13.005 1.00 8.49 N
ATOM 23 N3 G B 12 -1.367 36.442 -10.932 1.00 7.99 N
ATOM 24 C4 G B 12 -0.681 37.392 -10.266 1.00 8.34 C
ATOM 25 P A B 13 1.741 34.445 -5.512 1.00 11.20 P
ATOM 26 OP1 A B 13 1.836 33.187 -4.740 1.00 13.11 O
ATOM 27 OP2 A B 13 2.435 35.656 -5.023 1.00 12.19 O
ATOM 28 O5' A B 13 2.194 34.169 -7.022 1.00 11.24 O
TER
Atoms:
OP1: (1.836,33.187,-4.740)
OP2: (2.435,35.656,-5.023)
C3': (2.993,32.852,-9.543)
C1': (2.896,30.758,-8.477)
C5': (3.570,34.086,-7.361)
O4': (3.452,31.684,-7.560)
C8: (0.755,31.099,-7.156)
O2': (4.312,30.973,-10.379)
C6: (-1.397,28.480,-8.115)
C5: (-0.433,29.470,-7.833)
C4: (0.768,29.379,-8.507)
P: (1.741,34.445,-5.512)
C4': (3.820,32.896,-8.267)
C2': (3.054,31.363,-9.865)
C2: (0.129,27.573,-9.592)
N1: (-1.077,27.531,-9.017)
N3: (1.115,28.448,-9.407)
N6: (-2.603,28.440,-7.539)
N7: (-0.431,30.562,-6.981)
N9: (1.528,30.438,-8.069)
O5': (2.194,34.169,-7.022)
O3': (3.608,33.627,-10.563)
OP2: (2.435,35.656,-5.023)
C3': (2.993,32.852,-9.543)
C1': (2.896,30.758,-8.477)
C5': (3.570,34.086,-7.361)
O4': (3.452,31.684,-7.560)
C8: (0.755,31.099,-7.156)
O2': (4.312,30.973,-10.379)
C6: (-1.397,28.480,-8.115)
C5: (-0.433,29.470,-7.833)
C4: (0.768,29.379,-8.507)
P: (1.741,34.445,-5.512)
C4': (3.820,32.896,-8.267)
C2': (3.054,31.363,-9.865)
C2: (0.129,27.573,-9.592)
N1: (-1.077,27.531,-9.017)
N3: (1.115,28.448,-9.407)
N6: (-2.603,28.440,-7.539)
N7: (-0.431,30.562,-6.981)
N9: (1.528,30.438,-8.069)
O5': (2.194,34.169,-7.022)
O3': (3.608,33.627,-10.563)
OP1: (1.197,38.940,-2.870)
OP2: (2.170,39.993,-5.005)
C3': (-0.206,35.904,-6.503)
C1': (-1.703,36.885,-8.067)
C5': (-0.760,37.595,-4.664)
O6: (1.435,38.923,-12.698)
O4': (-1.848,37.527,-6.821)
C8: (0.039,38.675,-8.642)
C2: (-1.027,36.399,-12.207)
C6: (0.615,38.225,-12.092)
C5: (0.260,38.277,-10.725)
C4: (-0.681,37.392,-10.266)
P: (1.012,39.483,-4.235)
C4': (-1.274,36.703,-5.776)
C2': (-0.961,35.569,-7.791)
O2': (-1.847,34.481,-7.635)
N1: (-0.094,37.234,-12.771)
N2: (-1.613,35.496,-13.005)
N3: (-1.367,36.442,-10.932)
N7: (0.710,39.086,-9.687)
N9: (-0.838,37.660,-8.937)
O5': (0.298,38.395,-5.163)
O3': (0.184,34.762,-5.733)
OP2: (2.170,39.993,-5.005)
C3': (-0.206,35.904,-6.503)
C1': (-1.703,36.885,-8.067)
C5': (-0.760,37.595,-4.664)
O6: (1.435,38.923,-12.698)
O4': (-1.848,37.527,-6.821)
C8: (0.039,38.675,-8.642)
C2: (-1.027,36.399,-12.207)
C6: (0.615,38.225,-12.092)
C5: (0.260,38.277,-10.725)
C4: (-0.681,37.392,-10.266)
P: (1.012,39.483,-4.235)
C4': (-1.274,36.703,-5.776)
C2': (-0.961,35.569,-7.791)
O2': (-1.847,34.481,-7.635)
N1: (-0.094,37.234,-12.771)
N2: (-1.613,35.496,-13.005)
N3: (-1.367,36.442,-10.932)
N7: (0.710,39.086,-9.687)
N9: (-0.838,37.660,-8.937)
O5': (0.298,38.395,-5.163)
O3': (0.184,34.762,-5.733)
Image (generated by PyMOL):