ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1546:A1545

Extra

PDB:
ATOM 1 O3' G A1545 -2.379 -53.215 -1.663 1.00 88.94 O
ATOM 2 P A A1546 -3.173 -54.601 -1.447 1.00 94.01 P
ATOM 3 OP1 A A1546 -4.163 -54.366 -0.371 1.00 89.39 O
ATOM 4 OP2 A A1546 -2.174 -55.706 -1.324 1.00 78.94 O
ATOM 5 O5' A A1546 -4.003 -54.776 -2.811 1.00 81.77 O
ATOM 6 C5' A A1546 -5.273 -54.154 -2.948 1.00 74.81 C
ATOM 7 C4' A A1546 -5.559 -53.685 -4.370 1.00 79.59 C
ATOM 8 O4' A A1546 -4.530 -52.760 -4.827 1.00 76.27 O
ATOM 9 C3' A A1546 -5.649 -54.759 -5.450 1.00 73.40 C
ATOM 10 O3' A A1546 -6.962 -55.343 -5.451 1.00 73.22 O
ATOM 11 C2' A A1546 -5.404 -53.898 -6.688 1.00 74.60 C
ATOM 12 O2' A A1546 -6.554 -53.153 -7.052 1.00 73.79 O
ATOM 13 C1' A A1546 -4.309 -52.939 -6.213 1.00 76.32 C
ATOM 14 N9 A A1546 -2.917 -53.375 -6.401 1.00 87.50 N
ATOM 15 C8 A A1546 -2.087 -53.900 -5.450 1.00 78.61 C
ATOM 16 N7 A A1546 -0.885 -54.198 -5.885 1.00 74.49 N
ATOM 17 C5 A A1546 -0.918 -53.841 -7.217 1.00 81.12 C
ATOM 18 C6 A A1546 0.049 -53.907 -8.238 1.00 85.69 C
ATOM 19 N6 A A1546 1.283 -54.377 -8.056 1.00 92.35 N
ATOM 20 N1 A A1546 -0.295 -53.472 -9.463 1.00 81.93 N
ATOM 21 C2 A A1546 -1.534 -53.004 -9.642 1.00 78.52 C
ATOM 22 N3 A A1546 -2.529 -52.889 -8.763 1.00 79.45 N
ATOM 23 C4 A A1546 -2.157 -53.330 -7.553 1.00 82.42 C
ATOM 24 P A A1547 -7.228 -56.908 -5.703 1.00 95.14 P
ATOM 25 OP1 A A1547 -8.644 -57.201 -5.382 1.00 80.61 O
ATOM 26 OP2 A A1547 -6.145 -57.687 -5.051 1.00 85.87 O
ATOM 27 O5' A A1547 -7.131 -56.992 -7.296 1.00 91.00 O
TER

ATOM 1 O3' G B1544 -2.888 -52.206 4.420 1.00 64.00 O
ATOM 2 P G B1545 -2.855 -53.582 3.582 1.00101.64 P
ATOM 3 OP1 G B1545 -4.242 -54.099 3.468 1.00 80.75 O
ATOM 4 OP2 G B1545 -1.797 -54.452 4.151 1.00100.65 O
ATOM 5 O5' G B1545 -2.378 -53.083 2.131 1.00 99.29 O
ATOM 6 C5' G B1545 -3.235 -52.239 1.350 1.00 94.20 C
ATOM 7 C4' G B1545 -2.512 -51.620 0.167 1.00 82.41 C
ATOM 8 O4' G B1545 -1.626 -50.576 0.641 1.00 85.81 O
ATOM 9 C3' G B1545 -1.625 -52.573 -0.620 1.00 85.11 C
ATOM 10 O3' G B1545 -2.379 -53.215 -1.663 1.00 88.94 O
ATOM 11 C2' G B1545 -0.573 -51.627 -1.197 1.00 92.33 C
ATOM 12 O2' G B1545 -1.015 -51.018 -2.392 1.00108.94 O
ATOM 13 C1' G B1545 -0.443 -50.547 -0.132 1.00 82.25 C
ATOM 14 N9 G B1545 0.687 -50.732 0.762 1.00 87.06 N
ATOM 15 C8 G B1545 0.669 -51.386 1.964 1.00 90.82 C
ATOM 16 N7 G B1545 1.824 -51.402 2.568 1.00 87.57 N
ATOM 17 C5 G B1545 2.667 -50.711 1.712 1.00 94.59 C
ATOM 18 C6 G B1545 4.047 -50.412 1.844 1.00 93.43 C
ATOM 19 O6 G B1545 4.814 -50.709 2.773 1.00 98.31 O
ATOM 20 N1 G B1545 4.524 -49.692 0.750 1.00 90.00 N
ATOM 21 C2 G B1545 3.755 -49.316 -0.328 1.00 99.29 C
ATOM 22 N2 G B1545 4.396 -48.629 -1.286 1.00102.41 N
ATOM 23 N3 G B1545 2.457 -49.590 -0.462 1.00102.97 N
ATOM 24 C4 G B1545 1.979 -50.290 0.593 1.00 99.56 C
ATOM 25 P A B1546 -3.173 -54.601 -1.447 1.00 94.01 P
ATOM 26 OP1 A B1546 -4.163 -54.366 -0.371 1.00 89.39 O
ATOM 27 OP2 A B1546 -2.174 -55.706 -1.324 1.00 78.94 O
ATOM 28 O5' A B1546 -4.003 -54.776 -2.811 1.00 81.77 O
TER

Atoms:
OP1: (-4.163,-54.366,-0.371)
OP2: (-2.174,-55.706,-1.324)
C3': (-5.649,-54.759,-5.450)
C1': (-4.309,-52.939,-6.213)
C5': (-5.273,-54.154,-2.948)
O4': (-4.530,-52.760,-4.827)
C8: (-2.087,-53.900,-5.450)
O2': (-6.554,-53.153,-7.052)
C6: (0.049,-53.907,-8.238)
C5: (-0.918,-53.841,-7.217)
C4: (-2.157,-53.330,-7.553)
P: (-3.173,-54.601,-1.447)
C4': (-5.559,-53.685,-4.370)
C2': (-5.404,-53.898,-6.688)
C2: (-1.534,-53.004,-9.642)
N1: (-0.295,-53.472,-9.463)
N3: (-2.529,-52.889,-8.763)
N6: (1.283,-54.377,-8.056)
N7: (-0.885,-54.198,-5.885)
N9: (-2.917,-53.375,-6.401)
O5': (-4.003,-54.776,-2.811)
O3': (-6.962,-55.343,-5.451)
OP1: (-4.242,-54.099,3.468)
OP2: (-1.797,-54.452,4.151)
C3': (-1.625,-52.573,-0.620)
C1': (-0.443,-50.547,-0.132)
C5': (-3.235,-52.239,1.350)
O6: (4.814,-50.709,2.773)
O4': (-1.626,-50.576,0.641)
C8: (0.669,-51.386,1.964)
C2: (3.755,-49.316,-0.328)
C6: (4.047,-50.412,1.844)
C5: (2.667,-50.711,1.712)
C4: (1.979,-50.290,0.593)
P: (-2.855,-53.582,3.582)
C4': (-2.512,-51.620,0.167)
C2': (-0.573,-51.627,-1.197)
O2': (-1.015,-51.018,-2.392)
N1: (4.524,-49.692,0.750)
N2: (4.396,-48.629,-1.286)
N3: (2.457,-49.590,-0.462)
N7: (1.824,-51.402,2.568)
N9: (0.687,-50.732,0.762)
O5': (-2.378,-53.083,2.131)
O3': (-2.379,-53.215,-1.663)
Image (generated by PyMOL):
PyMOL image
show in jmol