ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A507:A506

Extra

PDB:
ATOM 1 O3' G A 506 25.183 139.866 70.103 1.00 42.41 O
ATOM 2 P A A 507 24.941 139.947 71.682 1.00 40.79 P
ATOM 3 OP1 A A 507 23.510 140.222 71.938 1.00 39.73 O
ATOM 4 OP2 A A 507 25.967 140.852 72.246 1.00 42.02 O
ATOM 5 O5' A A 507 25.282 138.472 72.159 1.00 41.08 O
ATOM 6 C5' A A 507 24.301 137.424 72.110 1.00 43.49 C
ATOM 7 C4' A A 507 24.970 136.082 72.315 1.00 44.44 C
ATOM 8 O4' A A 507 25.839 135.793 71.190 1.00 46.39 O
ATOM 9 C3' A A 507 25.866 136.025 73.538 1.00 43.76 C
ATOM 10 O3' A A 507 25.073 135.706 74.679 1.00 42.39 O
ATOM 11 C2' A A 507 26.874 134.952 73.144 1.00 45.86 C
ATOM 12 O2' A A 507 26.337 133.648 73.256 1.00 48.10 O
ATOM 13 C1' A A 507 27.067 135.264 71.655 1.00 46.05 C
ATOM 14 N9 A A 507 28.098 136.268 71.393 1.00 47.80 N
ATOM 15 C8 A A 507 27.907 137.548 70.930 1.00 48.68 C
ATOM 16 N7 A A 507 29.011 138.234 70.810 1.00 49.37 N
ATOM 17 C5 A A 507 30.000 137.350 71.217 1.00 49.33 C
ATOM 18 C6 A A 507 31.392 137.479 71.320 1.00 49.59 C
ATOM 19 N6 A A 507 32.052 138.604 71.026 1.00 49.63 N
ATOM 20 N1 A A 507 32.092 136.405 71.741 1.00 49.18 N
ATOM 21 C2 A A 507 31.425 135.290 72.042 1.00 49.55 C
ATOM 22 N3 A A 507 30.123 135.051 71.997 1.00 50.37 N
ATOM 23 C4 A A 507 29.455 136.134 71.569 1.00 49.05 C
ATOM 24 P A A 508 25.275 136.513 76.057 1.00 43.12 P
ATOM 25 OP1 A A 508 24.057 136.308 76.896 1.00 43.07 O
ATOM 26 OP2 A A 508 25.724 137.892 75.748 1.00 43.58 O
ATOM 27 O5' A A 508 26.499 135.757 76.745 1.00 43.77 O
TER

ATOM 1 O3' U B 505 21.228 140.902 65.064 1.00 45.86 O
ATOM 2 P G B 506 20.971 141.541 66.511 1.00 47.30 P
ATOM 3 OP1 G B 506 19.818 140.803 67.068 1.00 48.76 O
ATOM 4 OP2 G B 506 20.902 143.014 66.384 1.00 48.85 O
ATOM 5 O5' G B 506 22.269 141.163 67.349 1.00 46.85 O
ATOM 6 C5' G B 506 22.753 139.809 67.384 1.00 44.67 C
ATOM 7 C4' G B 506 24.154 139.773 67.929 1.00 41.93 C
ATOM 8 O4' G B 506 25.072 140.392 66.975 1.00 42.43 O
ATOM 9 C3' G B 506 24.314 140.551 69.231 1.00 40.71 C
ATOM 10 O3' G B 506 25.183 139.866 70.103 1.00 42.41 O
ATOM 11 C2' G B 506 24.999 141.825 68.770 1.00 40.68 C
ATOM 12 O2' G B 506 25.739 142.462 69.781 1.00 39.54 O
ATOM 13 C1' G B 506 25.908 141.270 67.682 1.00 41.87 C
ATOM 14 N9 G B 506 26.461 142.280 66.788 1.00 42.41 N
ATOM 15 C8 G B 506 25.885 143.471 66.418 1.00 43.21 C
ATOM 16 N7 G B 506 26.697 144.250 65.759 1.00 42.99 N
ATOM 17 C5 G B 506 27.866 143.511 65.653 1.00 43.05 C
ATOM 18 C6 G B 506 29.111 143.848 65.080 1.00 43.96 C
ATOM 19 O6 G B 506 29.444 144.917 64.554 1.00 45.52 O
ATOM 20 N1 G B 506 30.024 142.796 65.180 1.00 43.32 N
ATOM 21 C2 G B 506 29.766 141.585 65.775 1.00 43.15 C
ATOM 22 N2 G B 506 30.771 140.708 65.797 1.00 43.53 N
ATOM 23 N3 G B 506 28.608 141.262 66.320 1.00 43.36 N
ATOM 24 C4 G B 506 27.714 142.269 66.233 1.00 43.28 C
ATOM 25 P A B 507 24.941 139.947 71.682 1.00 40.79 P
ATOM 26 OP1 A B 507 23.510 140.222 71.938 1.00 39.73 O
ATOM 27 OP2 A B 507 25.967 140.852 72.246 1.00 42.02 O
ATOM 28 O5' A B 507 25.282 138.472 72.159 1.00 41.08 O
TER

Atoms:
OP1: (23.510,140.222,71.938)
OP2: (25.967,140.852,72.246)
C3': (25.866,136.025,73.538)
C1': (27.067,135.264,71.655)
C5': (24.301,137.424,72.110)
O4': (25.839,135.793,71.190)
C8: (27.907,137.548,70.930)
O2': (26.337,133.648,73.256)
C6: (31.392,137.479,71.320)
C5: (30.000,137.350,71.217)
C4: (29.455,136.134,71.569)
P: (24.941,139.947,71.682)
C4': (24.970,136.082,72.315)
C2': (26.874,134.952,73.144)
C2: (31.425,135.290,72.042)
N1: (32.092,136.405,71.741)
N3: (30.123,135.051,71.997)
N6: (32.052,138.604,71.026)
N7: (29.011,138.234,70.810)
N9: (28.098,136.268,71.393)
O5': (25.282,138.472,72.159)
O3': (25.073,135.706,74.679)
OP1: (19.818,140.803,67.068)
OP2: (20.902,143.014,66.384)
C3': (24.314,140.551,69.231)
C1': (25.908,141.270,67.682)
C5': (22.753,139.809,67.384)
O6: (29.444,144.917,64.554)
O4': (25.072,140.392,66.975)
C8: (25.885,143.471,66.418)
C2: (29.766,141.585,65.775)
C6: (29.111,143.848,65.080)
C5: (27.866,143.511,65.653)
C4: (27.714,142.269,66.233)
P: (20.971,141.541,66.511)
C4': (24.154,139.773,67.929)
C2': (24.999,141.825,68.770)
O2': (25.739,142.462,69.781)
N1: (30.024,142.796,65.180)
N2: (30.771,140.708,65.797)
N3: (28.608,141.262,66.320)
N7: (26.697,144.250,65.759)
N9: (26.461,142.280,66.788)
O5': (22.269,141.163,67.349)
O3': (25.183,139.866,70.103)
Image (generated by PyMOL):
PyMOL image
show in jmol