Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B79:B78
Extra
PDB:
ATOM 1 O3' G A 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 2 P A A 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 3 OP1 A A 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 4 OP2 A A 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 5 O5' A A 79 -16.126 -30.881 19.578 1.00 58.43 O
ATOM 6 C5' A A 79 -15.382 -29.668 19.596 1.00 58.66 C
ATOM 7 C4' A A 79 -13.974 -29.869 19.061 1.00 58.64 C
ATOM 8 O4' A A 79 -13.272 -30.869 19.844 1.00 58.61 O
ATOM 9 C3' A A 79 -13.874 -30.396 17.639 1.00 58.74 C
ATOM 10 O3' A A 79 -14.033 -29.350 16.691 1.00 59.34 O
ATOM 11 C2' A A 79 -12.462 -30.979 17.646 1.00 58.29 C
ATOM 12 O2' A A 79 -11.444 -30.003 17.610 1.00 59.14 O
ATOM 13 C1' A A 79 -12.437 -31.655 19.007 1.00 58.21 C
ATOM 14 N9 A A 79 -12.920 -33.036 18.957 1.00 58.71 N
ATOM 15 C8 A A 79 -14.171 -33.495 19.278 1.00 59.55 C
ATOM 16 N7 A A 79 -14.330 -34.789 19.132 1.00 59.27 N
ATOM 17 C5 A A 79 -13.095 -35.210 18.677 1.00 58.71 C
ATOM 18 C6 A A 79 -12.600 -36.482 18.328 1.00 58.26 C
ATOM 19 N6 A A 79 -13.332 -37.598 18.396 1.00 57.85 N
ATOM 20 N1 A A 79 -11.315 -36.562 17.918 1.00 58.07 N
ATOM 21 C2 A A 79 -10.575 -35.447 17.851 1.00 57.99 C
ATOM 22 N3 A A 79 -10.937 -34.200 18.150 1.00 58.68 N
ATOM 23 C4 A A 79 -12.216 -34.147 18.562 1.00 58.47 C
ATOM 24 P C A 80 -15.176 -29.402 15.566 1.00 60.23 P
ATOM 25 OP1 C A 80 -14.870 -28.320 14.600 1.00 60.96 O
ATOM 26 OP2 C A 80 -16.506 -29.462 16.209 1.00 59.82 O
ATOM 27 O5' C A 80 -14.948 -30.815 14.854 1.00 59.97 O
TER
ATOM 1 O3' G B 77 -19.465 -30.276 26.633 1.00 63.34 O
ATOM 2 P G B 78 -19.915 -30.572 25.125 1.00 62.42 P
ATOM 3 OP1 G B 78 -20.103 -29.262 24.460 1.00 62.49 O
ATOM 4 OP2 G B 78 -21.011 -31.571 25.125 1.00 61.79 O
ATOM 5 O5' G B 78 -18.627 -31.298 24.517 1.00 61.54 O
ATOM 6 C5' G B 78 -17.358 -30.654 24.488 1.00 59.95 C
ATOM 7 C4' G B 78 -16.251 -31.671 24.299 1.00 58.39 C
ATOM 8 O4' G B 78 -16.322 -32.677 25.335 1.00 57.88 O
ATOM 9 C3' G B 78 -16.330 -32.509 23.038 1.00 57.79 C
ATOM 10 O3' G B 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 11 C2' G B 78 -15.376 -33.633 23.417 1.00 56.81 C
ATOM 12 O2' G B 78 -14.031 -33.210 23.480 1.00 56.60 O
ATOM 13 C1' G B 78 -15.847 -33.914 24.836 1.00 56.77 C
ATOM 14 N9 G B 78 -16.916 -34.905 24.967 1.00 56.49 N
ATOM 15 C8 G B 78 -18.242 -34.632 25.185 1.00 56.76 C
ATOM 16 N7 G B 78 -18.985 -35.695 25.275 1.00 57.02 N
ATOM 17 C5 G B 78 -18.098 -36.746 25.112 1.00 56.53 C
ATOM 18 C6 G B 78 -18.343 -38.139 25.116 1.00 56.73 C
ATOM 19 O6 G B 78 -19.431 -38.708 25.270 1.00 58.18 O
ATOM 20 N1 G B 78 -17.182 -38.885 24.915 1.00 55.55 N
ATOM 21 C2 G B 78 -15.937 -38.334 24.734 1.00 55.08 C
ATOM 22 N2 G B 78 -14.932 -39.204 24.555 1.00 55.08 N
ATOM 23 N3 G B 78 -15.695 -37.026 24.728 1.00 55.09 N
ATOM 24 C4 G B 78 -16.816 -36.284 24.923 1.00 55.93 C
ATOM 25 P A B 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 26 OP1 A B 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 27 OP2 A B 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 28 O5' A B 79 -16.126 -30.881 19.578 1.00 58.43 O
TER
ATOM 2 P A A 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 3 OP1 A A 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 4 OP2 A A 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 5 O5' A A 79 -16.126 -30.881 19.578 1.00 58.43 O
ATOM 6 C5' A A 79 -15.382 -29.668 19.596 1.00 58.66 C
ATOM 7 C4' A A 79 -13.974 -29.869 19.061 1.00 58.64 C
ATOM 8 O4' A A 79 -13.272 -30.869 19.844 1.00 58.61 O
ATOM 9 C3' A A 79 -13.874 -30.396 17.639 1.00 58.74 C
ATOM 10 O3' A A 79 -14.033 -29.350 16.691 1.00 59.34 O
ATOM 11 C2' A A 79 -12.462 -30.979 17.646 1.00 58.29 C
ATOM 12 O2' A A 79 -11.444 -30.003 17.610 1.00 59.14 O
ATOM 13 C1' A A 79 -12.437 -31.655 19.007 1.00 58.21 C
ATOM 14 N9 A A 79 -12.920 -33.036 18.957 1.00 58.71 N
ATOM 15 C8 A A 79 -14.171 -33.495 19.278 1.00 59.55 C
ATOM 16 N7 A A 79 -14.330 -34.789 19.132 1.00 59.27 N
ATOM 17 C5 A A 79 -13.095 -35.210 18.677 1.00 58.71 C
ATOM 18 C6 A A 79 -12.600 -36.482 18.328 1.00 58.26 C
ATOM 19 N6 A A 79 -13.332 -37.598 18.396 1.00 57.85 N
ATOM 20 N1 A A 79 -11.315 -36.562 17.918 1.00 58.07 N
ATOM 21 C2 A A 79 -10.575 -35.447 17.851 1.00 57.99 C
ATOM 22 N3 A A 79 -10.937 -34.200 18.150 1.00 58.68 N
ATOM 23 C4 A A 79 -12.216 -34.147 18.562 1.00 58.47 C
ATOM 24 P C A 80 -15.176 -29.402 15.566 1.00 60.23 P
ATOM 25 OP1 C A 80 -14.870 -28.320 14.600 1.00 60.96 O
ATOM 26 OP2 C A 80 -16.506 -29.462 16.209 1.00 59.82 O
ATOM 27 O5' C A 80 -14.948 -30.815 14.854 1.00 59.97 O
TER
ATOM 1 O3' G B 77 -19.465 -30.276 26.633 1.00 63.34 O
ATOM 2 P G B 78 -19.915 -30.572 25.125 1.00 62.42 P
ATOM 3 OP1 G B 78 -20.103 -29.262 24.460 1.00 62.49 O
ATOM 4 OP2 G B 78 -21.011 -31.571 25.125 1.00 61.79 O
ATOM 5 O5' G B 78 -18.627 -31.298 24.517 1.00 61.54 O
ATOM 6 C5' G B 78 -17.358 -30.654 24.488 1.00 59.95 C
ATOM 7 C4' G B 78 -16.251 -31.671 24.299 1.00 58.39 C
ATOM 8 O4' G B 78 -16.322 -32.677 25.335 1.00 57.88 O
ATOM 9 C3' G B 78 -16.330 -32.509 23.038 1.00 57.79 C
ATOM 10 O3' G B 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 11 C2' G B 78 -15.376 -33.633 23.417 1.00 56.81 C
ATOM 12 O2' G B 78 -14.031 -33.210 23.480 1.00 56.60 O
ATOM 13 C1' G B 78 -15.847 -33.914 24.836 1.00 56.77 C
ATOM 14 N9 G B 78 -16.916 -34.905 24.967 1.00 56.49 N
ATOM 15 C8 G B 78 -18.242 -34.632 25.185 1.00 56.76 C
ATOM 16 N7 G B 78 -18.985 -35.695 25.275 1.00 57.02 N
ATOM 17 C5 G B 78 -18.098 -36.746 25.112 1.00 56.53 C
ATOM 18 C6 G B 78 -18.343 -38.139 25.116 1.00 56.73 C
ATOM 19 O6 G B 78 -19.431 -38.708 25.270 1.00 58.18 O
ATOM 20 N1 G B 78 -17.182 -38.885 24.915 1.00 55.55 N
ATOM 21 C2 G B 78 -15.937 -38.334 24.734 1.00 55.08 C
ATOM 22 N2 G B 78 -14.932 -39.204 24.555 1.00 55.08 N
ATOM 23 N3 G B 78 -15.695 -37.026 24.728 1.00 55.09 N
ATOM 24 C4 G B 78 -16.816 -36.284 24.923 1.00 55.93 C
ATOM 25 P A B 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 26 OP1 A B 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 27 OP2 A B 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 28 O5' A B 79 -16.126 -30.881 19.578 1.00 58.43 O
TER
Atoms:
OP1: (-17.745,-30.140,21.365)
OP2: (-17.794,-32.529,20.467)
C3': (-13.874,-30.396,17.639)
C1': (-12.437,-31.655,19.007)
C5': (-15.382,-29.668,19.596)
O4': (-13.272,-30.869,19.844)
C8: (-14.171,-33.495,19.278)
O2': (-11.444,-30.003,17.610)
C6: (-12.600,-36.482,18.328)
C5: (-13.095,-35.210,18.677)
C4: (-12.216,-34.147,18.562)
P: (-17.020,-31.319,20.835)
C4': (-13.974,-29.869,19.061)
C2': (-12.462,-30.979,17.646)
C2: (-10.575,-35.447,17.851)
N1: (-11.315,-36.562,17.918)
N3: (-10.937,-34.200,18.150)
N6: (-13.332,-37.598,18.396)
N7: (-14.330,-34.789,19.132)
N9: (-12.920,-33.036,18.957)
O5': (-16.126,-30.881,19.578)
O3': (-14.033,-29.350,16.691)
OP2: (-17.794,-32.529,20.467)
C3': (-13.874,-30.396,17.639)
C1': (-12.437,-31.655,19.007)
C5': (-15.382,-29.668,19.596)
O4': (-13.272,-30.869,19.844)
C8: (-14.171,-33.495,19.278)
O2': (-11.444,-30.003,17.610)
C6: (-12.600,-36.482,18.328)
C5: (-13.095,-35.210,18.677)
C4: (-12.216,-34.147,18.562)
P: (-17.020,-31.319,20.835)
C4': (-13.974,-29.869,19.061)
C2': (-12.462,-30.979,17.646)
C2: (-10.575,-35.447,17.851)
N1: (-11.315,-36.562,17.918)
N3: (-10.937,-34.200,18.150)
N6: (-13.332,-37.598,18.396)
N7: (-14.330,-34.789,19.132)
N9: (-12.920,-33.036,18.957)
O5': (-16.126,-30.881,19.578)
O3': (-14.033,-29.350,16.691)
OP1: (-20.103,-29.262,24.460)
OP2: (-21.011,-31.571,25.125)
C3': (-16.330,-32.509,23.038)
C1': (-15.847,-33.914,24.836)
C5': (-17.358,-30.654,24.488)
O6: (-19.431,-38.708,25.270)
O4': (-16.322,-32.677,25.335)
C8: (-18.242,-34.632,25.185)
C2: (-15.937,-38.334,24.734)
C6: (-18.343,-38.139,25.116)
C5: (-18.098,-36.746,25.112)
C4: (-16.816,-36.284,24.923)
P: (-19.915,-30.572,25.125)
C4': (-16.251,-31.671,24.299)
C2': (-15.376,-33.633,23.417)
O2': (-14.031,-33.210,23.480)
N1: (-17.182,-38.885,24.915)
N2: (-14.932,-39.204,24.555)
N3: (-15.695,-37.026,24.728)
N7: (-18.985,-35.695,25.275)
N9: (-16.916,-34.905,24.967)
O5': (-18.627,-31.298,24.517)
O3': (-15.914,-31.760,21.909)
OP2: (-21.011,-31.571,25.125)
C3': (-16.330,-32.509,23.038)
C1': (-15.847,-33.914,24.836)
C5': (-17.358,-30.654,24.488)
O6: (-19.431,-38.708,25.270)
O4': (-16.322,-32.677,25.335)
C8: (-18.242,-34.632,25.185)
C2: (-15.937,-38.334,24.734)
C6: (-18.343,-38.139,25.116)
C5: (-18.098,-36.746,25.112)
C4: (-16.816,-36.284,24.923)
P: (-19.915,-30.572,25.125)
C4': (-16.251,-31.671,24.299)
C2': (-15.376,-33.633,23.417)
O2': (-14.031,-33.210,23.480)
N1: (-17.182,-38.885,24.915)
N2: (-14.932,-39.204,24.555)
N3: (-15.695,-37.026,24.728)
N7: (-18.985,-35.695,25.275)
N9: (-16.916,-34.905,24.967)
O5': (-18.627,-31.298,24.517)
O3': (-15.914,-31.760,21.909)
Image (generated by PyMOL):