Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1308:A1307
Extra
PDB:
ATOM 1 O3' G A1307 257.292 112.252 -4.364 1.00 91.48 O
ATOM 2 P A A1308 256.289 112.644 -5.562 1.00 89.45 P
ATOM 3 OP1 A A1308 256.965 112.286 -6.858 1.00 89.03 O
ATOM 4 OP2 A A1308 255.807 114.025 -5.346 1.00 89.33 O
ATOM 5 O5' A A1308 255.074 111.647 -5.351 1.00 86.96 O
ATOM 6 C5' A A1308 255.288 110.242 -5.065 1.00 84.14 C
ATOM 7 C4' A A1308 253.964 109.573 -4.755 1.00 82.94 C
ATOM 8 O4' A A1308 253.437 110.105 -3.509 1.00 82.02 O
ATOM 9 C3' A A1308 252.875 109.838 -5.790 1.00 81.82 C
ATOM 10 O3' A A1308 252.918 108.878 -6.830 1.00 81.11 O
ATOM 11 C2' A A1308 251.593 109.754 -4.973 1.00 80.29 C
ATOM 12 O2' A A1308 251.185 108.414 -4.797 1.00 79.48 O
ATOM 13 C1' A A1308 252.042 110.335 -3.627 1.00 79.94 C
ATOM 14 N9 A A1308 251.819 111.780 -3.495 1.00 78.37 N
ATOM 15 C8 A A1308 252.769 112.745 -3.257 1.00 77.73 C
ATOM 16 N7 A A1308 252.288 113.962 -3.203 1.00 76.86 N
ATOM 17 C5 A A1308 250.931 113.793 -3.417 1.00 76.04 C
ATOM 18 C6 A A1308 249.876 114.703 -3.483 1.00 75.23 C
ATOM 19 N6 A A1308 250.027 116.015 -3.336 1.00 76.26 N
ATOM 20 N1 A A1308 248.641 114.218 -3.708 1.00 76.24 N
ATOM 21 C2 A A1308 248.489 112.895 -3.856 1.00 77.99 C
ATOM 22 N3 A A1308 249.404 111.933 -3.818 1.00 78.72 N
ATOM 23 C4 A A1308 250.623 112.454 -3.592 1.00 77.94 C
ATOM 24 P A A1309 252.692 109.341 -8.350 1.00 81.07 P
ATOM 25 OP1 A A1309 252.966 108.144 -9.202 1.00 80.44 O
ATOM 26 OP2 A A1309 253.438 110.609 -8.572 1.00 80.76 O
ATOM 27 O5' A A1309 251.134 109.648 -8.437 1.00 80.99 O
TER
ATOM 1 O3' U B1306 260.648 110.857 -0.157 1.00 91.62 O
ATOM 2 P G B1307 261.597 111.153 -1.411 1.00 91.91 P
ATOM 3 OP1 G B1307 261.309 110.127 -2.449 1.00 92.03 O
ATOM 4 OP2 G B1307 262.957 111.318 -0.883 1.00 94.12 O
ATOM 5 O5' G B1307 261.127 112.538 -1.960 1.00 92.00 O
ATOM 6 C5' G B1307 260.226 112.621 -3.068 1.00 93.52 C
ATOM 7 C4' G B1307 258.809 112.589 -2.568 1.00 93.57 C
ATOM 8 O4' G B1307 258.745 113.282 -1.305 1.00 95.71 O
ATOM 9 C3' G B1307 257.790 113.254 -3.472 1.00 93.15 C
ATOM 10 O3' G B1307 257.292 112.252 -4.364 1.00 91.48 O
ATOM 11 C2' G B1307 256.729 113.716 -2.481 1.00 94.58 C
ATOM 12 O2' G B1307 255.875 112.646 -2.135 1.00 96.84 O
ATOM 13 C1' G B1307 257.553 114.029 -1.229 1.00 95.08 C
ATOM 14 N9 G B1307 257.908 115.423 -0.954 1.00 95.18 N
ATOM 15 C8 G B1307 259.126 116.016 -1.180 1.00 95.65 C
ATOM 16 N7 G B1307 259.181 117.255 -0.772 1.00 95.45 N
ATOM 17 C5 G B1307 257.918 117.508 -0.261 1.00 94.82 C
ATOM 18 C6 G B1307 257.383 118.688 0.320 1.00 94.30 C
ATOM 19 O6 G B1307 257.940 119.778 0.505 1.00 92.76 O
ATOM 20 N1 G B1307 256.058 118.513 0.700 1.00 94.09 N
ATOM 21 C2 G B1307 255.339 117.355 0.540 1.00 93.63 C
ATOM 22 N2 G B1307 254.074 117.385 0.958 1.00 93.19 N
ATOM 23 N3 G B1307 255.825 116.247 1.005 1.00 94.33 N
ATOM 24 C4 G B1307 257.111 116.392 -0.373 1.00 95.01 C
ATOM 25 P A B1308 256.289 112.644 -5.562 1.00 89.45 P
ATOM 26 OP1 A B1308 256.965 112.286 -6.858 1.00 89.03 O
ATOM 27 OP2 A B1308 255.807 114.025 -5.346 1.00 89.33 O
ATOM 28 O5' A B1308 255.074 111.647 -5.351 1.00 86.96 O
TER
ATOM 2 P A A1308 256.289 112.644 -5.562 1.00 89.45 P
ATOM 3 OP1 A A1308 256.965 112.286 -6.858 1.00 89.03 O
ATOM 4 OP2 A A1308 255.807 114.025 -5.346 1.00 89.33 O
ATOM 5 O5' A A1308 255.074 111.647 -5.351 1.00 86.96 O
ATOM 6 C5' A A1308 255.288 110.242 -5.065 1.00 84.14 C
ATOM 7 C4' A A1308 253.964 109.573 -4.755 1.00 82.94 C
ATOM 8 O4' A A1308 253.437 110.105 -3.509 1.00 82.02 O
ATOM 9 C3' A A1308 252.875 109.838 -5.790 1.00 81.82 C
ATOM 10 O3' A A1308 252.918 108.878 -6.830 1.00 81.11 O
ATOM 11 C2' A A1308 251.593 109.754 -4.973 1.00 80.29 C
ATOM 12 O2' A A1308 251.185 108.414 -4.797 1.00 79.48 O
ATOM 13 C1' A A1308 252.042 110.335 -3.627 1.00 79.94 C
ATOM 14 N9 A A1308 251.819 111.780 -3.495 1.00 78.37 N
ATOM 15 C8 A A1308 252.769 112.745 -3.257 1.00 77.73 C
ATOM 16 N7 A A1308 252.288 113.962 -3.203 1.00 76.86 N
ATOM 17 C5 A A1308 250.931 113.793 -3.417 1.00 76.04 C
ATOM 18 C6 A A1308 249.876 114.703 -3.483 1.00 75.23 C
ATOM 19 N6 A A1308 250.027 116.015 -3.336 1.00 76.26 N
ATOM 20 N1 A A1308 248.641 114.218 -3.708 1.00 76.24 N
ATOM 21 C2 A A1308 248.489 112.895 -3.856 1.00 77.99 C
ATOM 22 N3 A A1308 249.404 111.933 -3.818 1.00 78.72 N
ATOM 23 C4 A A1308 250.623 112.454 -3.592 1.00 77.94 C
ATOM 24 P A A1309 252.692 109.341 -8.350 1.00 81.07 P
ATOM 25 OP1 A A1309 252.966 108.144 -9.202 1.00 80.44 O
ATOM 26 OP2 A A1309 253.438 110.609 -8.572 1.00 80.76 O
ATOM 27 O5' A A1309 251.134 109.648 -8.437 1.00 80.99 O
TER
ATOM 1 O3' U B1306 260.648 110.857 -0.157 1.00 91.62 O
ATOM 2 P G B1307 261.597 111.153 -1.411 1.00 91.91 P
ATOM 3 OP1 G B1307 261.309 110.127 -2.449 1.00 92.03 O
ATOM 4 OP2 G B1307 262.957 111.318 -0.883 1.00 94.12 O
ATOM 5 O5' G B1307 261.127 112.538 -1.960 1.00 92.00 O
ATOM 6 C5' G B1307 260.226 112.621 -3.068 1.00 93.52 C
ATOM 7 C4' G B1307 258.809 112.589 -2.568 1.00 93.57 C
ATOM 8 O4' G B1307 258.745 113.282 -1.305 1.00 95.71 O
ATOM 9 C3' G B1307 257.790 113.254 -3.472 1.00 93.15 C
ATOM 10 O3' G B1307 257.292 112.252 -4.364 1.00 91.48 O
ATOM 11 C2' G B1307 256.729 113.716 -2.481 1.00 94.58 C
ATOM 12 O2' G B1307 255.875 112.646 -2.135 1.00 96.84 O
ATOM 13 C1' G B1307 257.553 114.029 -1.229 1.00 95.08 C
ATOM 14 N9 G B1307 257.908 115.423 -0.954 1.00 95.18 N
ATOM 15 C8 G B1307 259.126 116.016 -1.180 1.00 95.65 C
ATOM 16 N7 G B1307 259.181 117.255 -0.772 1.00 95.45 N
ATOM 17 C5 G B1307 257.918 117.508 -0.261 1.00 94.82 C
ATOM 18 C6 G B1307 257.383 118.688 0.320 1.00 94.30 C
ATOM 19 O6 G B1307 257.940 119.778 0.505 1.00 92.76 O
ATOM 20 N1 G B1307 256.058 118.513 0.700 1.00 94.09 N
ATOM 21 C2 G B1307 255.339 117.355 0.540 1.00 93.63 C
ATOM 22 N2 G B1307 254.074 117.385 0.958 1.00 93.19 N
ATOM 23 N3 G B1307 255.825 116.247 1.005 1.00 94.33 N
ATOM 24 C4 G B1307 257.111 116.392 -0.373 1.00 95.01 C
ATOM 25 P A B1308 256.289 112.644 -5.562 1.00 89.45 P
ATOM 26 OP1 A B1308 256.965 112.286 -6.858 1.00 89.03 O
ATOM 27 OP2 A B1308 255.807 114.025 -5.346 1.00 89.33 O
ATOM 28 O5' A B1308 255.074 111.647 -5.351 1.00 86.96 O
TER
Atoms:
OP1: (256.965,112.286,-6.858)
OP2: (255.807,114.025,-5.346)
C3': (252.875,109.838,-5.790)
C1': (252.042,110.335,-3.627)
C5': (255.288,110.242,-5.065)
O4': (253.437,110.105,-3.509)
C8: (252.769,112.745,-3.257)
O2': (251.185,108.414,-4.797)
C6: (249.876,114.703,-3.483)
C5: (250.931,113.793,-3.417)
C4: (250.623,112.454,-3.592)
P: (256.289,112.644,-5.562)
C4': (253.964,109.573,-4.755)
C2': (251.593,109.754,-4.973)
C2: (248.489,112.895,-3.856)
N1: (248.641,114.218,-3.708)
N3: (249.404,111.933,-3.818)
N6: (250.027,116.015,-3.336)
N7: (252.288,113.962,-3.203)
N9: (251.819,111.780,-3.495)
O5': (255.074,111.647,-5.351)
O3': (252.918,108.878,-6.830)
OP2: (255.807,114.025,-5.346)
C3': (252.875,109.838,-5.790)
C1': (252.042,110.335,-3.627)
C5': (255.288,110.242,-5.065)
O4': (253.437,110.105,-3.509)
C8: (252.769,112.745,-3.257)
O2': (251.185,108.414,-4.797)
C6: (249.876,114.703,-3.483)
C5: (250.931,113.793,-3.417)
C4: (250.623,112.454,-3.592)
P: (256.289,112.644,-5.562)
C4': (253.964,109.573,-4.755)
C2': (251.593,109.754,-4.973)
C2: (248.489,112.895,-3.856)
N1: (248.641,114.218,-3.708)
N3: (249.404,111.933,-3.818)
N6: (250.027,116.015,-3.336)
N7: (252.288,113.962,-3.203)
N9: (251.819,111.780,-3.495)
O5': (255.074,111.647,-5.351)
O3': (252.918,108.878,-6.830)
OP1: (261.309,110.127,-2.449)
OP2: (262.957,111.318,-0.883)
C3': (257.790,113.254,-3.472)
C1': (257.553,114.029,-1.229)
C5': (260.226,112.621,-3.068)
O6: (257.940,119.778,0.505)
O4': (258.745,113.282,-1.305)
C8: (259.126,116.016,-1.180)
C2: (255.339,117.355,0.540)
C6: (257.383,118.688,0.320)
C5: (257.918,117.508,-0.261)
C4: (257.111,116.392,-0.373)
P: (261.597,111.153,-1.411)
C4': (258.809,112.589,-2.568)
C2': (256.729,113.716,-2.481)
O2': (255.875,112.646,-2.135)
N1: (256.058,118.513,0.700)
N2: (254.074,117.385,0.958)
N3: (255.825,116.247,1.005)
N7: (259.181,117.255,-0.772)
N9: (257.908,115.423,-0.954)
O5': (261.127,112.538,-1.960)
O3': (257.292,112.252,-4.364)
OP2: (262.957,111.318,-0.883)
C3': (257.790,113.254,-3.472)
C1': (257.553,114.029,-1.229)
C5': (260.226,112.621,-3.068)
O6: (257.940,119.778,0.505)
O4': (258.745,113.282,-1.305)
C8: (259.126,116.016,-1.180)
C2: (255.339,117.355,0.540)
C6: (257.383,118.688,0.320)
C5: (257.918,117.508,-0.261)
C4: (257.111,116.392,-0.373)
P: (261.597,111.153,-1.411)
C4': (258.809,112.589,-2.568)
C2': (256.729,113.716,-2.481)
O2': (255.875,112.646,-2.135)
N1: (256.058,118.513,0.700)
N2: (254.074,117.385,0.958)
N3: (255.825,116.247,1.005)
N7: (259.181,117.255,-0.772)
N9: (257.908,115.423,-0.954)
O5': (261.127,112.538,-1.960)
O3': (257.292,112.252,-4.364)
Image (generated by PyMOL):