Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:088:087
Extra
PDB:
ATOM 1 O3' G A 87 37.401 159.812 17.771 1.00 64.97 O
ATOM 2 P A A 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 3 OP1 A A 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 4 OP2 A A 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 5 O5' A A 88 39.126 159.544 19.560 1.00 62.63 O
ATOM 6 C5' A A 88 39.843 160.775 19.726 1.00 60.98 C
ATOM 7 C4' A A 88 39.573 161.351 21.090 1.00 58.92 C
ATOM 8 O4' A A 88 38.186 161.776 21.168 1.00 58.74 O
ATOM 9 C3' A A 88 39.717 160.385 22.249 1.00 56.64 C
ATOM 10 O3' A A 88 41.069 160.168 22.631 1.00 53.96 O
ATOM 11 C2' A A 88 38.878 161.071 23.314 1.00 57.27 C
ATOM 12 O2' A A 88 39.509 162.200 23.874 1.00 57.10 O
ATOM 13 C1' A A 88 37.692 161.545 22.477 1.00 58.54 C
ATOM 14 N9 A A 88 36.676 160.499 22.401 1.00 60.91 N
ATOM 15 C8 A A 88 36.371 159.692 21.333 1.00 61.72 C
ATOM 16 N7 A A 88 35.433 158.813 21.586 1.00 63.03 N
ATOM 17 C5 A A 88 35.091 159.062 22.908 1.00 63.19 C
ATOM 18 C6 A A 88 34.160 158.461 23.775 1.00 63.84 C
ATOM 19 N6 A A 88 33.375 157.437 23.426 1.00 64.17 N
ATOM 20 N1 A A 88 34.064 158.951 25.030 1.00 64.12 N
ATOM 21 C2 A A 88 34.857 159.970 25.383 1.00 64.28 C
ATOM 22 N3 A A 88 35.772 160.616 24.663 1.00 63.76 N
ATOM 23 C4 A A 88 35.841 160.106 23.419 1.00 62.81 C
ATOM 24 P A A 89 41.565 158.673 22.965 1.00 54.72 P
ATOM 25 OP1 A A 89 42.980 158.753 23.410 1.00 52.95 O
ATOM 26 OP2 A A 89 41.217 157.803 21.818 1.00 54.02 O
ATOM 27 O5' A A 89 40.651 158.237 24.202 1.00 54.43 O
TER
ATOM 1 O3' A B 86 38.339 164.729 13.525 1.00 70.94 O
ATOM 2 P G B 87 38.111 163.165 13.791 1.00 69.98 P
ATOM 3 OP1 G B 87 39.407 162.564 14.205 1.00 68.65 O
ATOM 4 OP2 G B 87 37.398 162.621 12.607 1.00 70.85 O
ATOM 5 O5' G B 87 37.087 163.138 15.011 1.00 69.26 O
ATOM 6 C5' G B 87 37.538 163.241 16.371 1.00 67.92 C
ATOM 7 C4' G B 87 36.980 162.097 17.178 1.00 66.07 C
ATOM 8 O4' G B 87 35.531 162.150 17.089 1.00 66.45 O
ATOM 9 C3' G B 87 37.374 160.714 16.676 1.00 65.65 C
ATOM 10 O3' G B 87 37.401 159.812 17.771 1.00 64.97 O
ATOM 11 C2' G B 87 36.237 160.371 15.720 1.00 65.44 C
ATOM 12 O2' G B 87 36.046 158.986 15.531 1.00 63.97 O
ATOM 13 C1' G B 87 35.042 160.993 16.436 1.00 66.47 C
ATOM 14 N9 G B 87 33.979 161.414 15.530 1.00 68.47 N
ATOM 15 C8 G B 87 34.120 162.159 14.384 1.00 69.40 C
ATOM 16 N7 G B 87 32.987 162.394 13.784 1.00 70.08 N
ATOM 17 C5 G B 87 32.041 161.765 14.578 1.00 70.95 C
ATOM 18 C6 G B 87 30.637 161.680 14.432 1.00 72.18 C
ATOM 19 O6 G B 87 29.922 162.156 13.541 1.00 73.97 O
ATOM 20 N1 G B 87 30.062 160.951 15.464 1.00 72.24 N
ATOM 21 C2 G B 87 30.748 160.378 16.503 1.00 71.76 C
ATOM 22 N2 G B 87 30.009 159.713 17.397 1.00 72.72 N
ATOM 23 N3 G B 87 32.058 160.449 16.652 1.00 70.87 N
ATOM 24 C4 G B 87 32.638 161.154 15.660 1.00 70.10 C
ATOM 25 P A B 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 26 OP1 A B 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 27 OP2 A B 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 28 O5' A B 88 39.126 159.544 19.560 1.00 62.63 O
TER
ATOM 2 P A A 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 3 OP1 A A 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 4 OP2 A A 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 5 O5' A A 88 39.126 159.544 19.560 1.00 62.63 O
ATOM 6 C5' A A 88 39.843 160.775 19.726 1.00 60.98 C
ATOM 7 C4' A A 88 39.573 161.351 21.090 1.00 58.92 C
ATOM 8 O4' A A 88 38.186 161.776 21.168 1.00 58.74 O
ATOM 9 C3' A A 88 39.717 160.385 22.249 1.00 56.64 C
ATOM 10 O3' A A 88 41.069 160.168 22.631 1.00 53.96 O
ATOM 11 C2' A A 88 38.878 161.071 23.314 1.00 57.27 C
ATOM 12 O2' A A 88 39.509 162.200 23.874 1.00 57.10 O
ATOM 13 C1' A A 88 37.692 161.545 22.477 1.00 58.54 C
ATOM 14 N9 A A 88 36.676 160.499 22.401 1.00 60.91 N
ATOM 15 C8 A A 88 36.371 159.692 21.333 1.00 61.72 C
ATOM 16 N7 A A 88 35.433 158.813 21.586 1.00 63.03 N
ATOM 17 C5 A A 88 35.091 159.062 22.908 1.00 63.19 C
ATOM 18 C6 A A 88 34.160 158.461 23.775 1.00 63.84 C
ATOM 19 N6 A A 88 33.375 157.437 23.426 1.00 64.17 N
ATOM 20 N1 A A 88 34.064 158.951 25.030 1.00 64.12 N
ATOM 21 C2 A A 88 34.857 159.970 25.383 1.00 64.28 C
ATOM 22 N3 A A 88 35.772 160.616 24.663 1.00 63.76 N
ATOM 23 C4 A A 88 35.841 160.106 23.419 1.00 62.81 C
ATOM 24 P A A 89 41.565 158.673 22.965 1.00 54.72 P
ATOM 25 OP1 A A 89 42.980 158.753 23.410 1.00 52.95 O
ATOM 26 OP2 A A 89 41.217 157.803 21.818 1.00 54.02 O
ATOM 27 O5' A A 89 40.651 158.237 24.202 1.00 54.43 O
TER
ATOM 1 O3' A B 86 38.339 164.729 13.525 1.00 70.94 O
ATOM 2 P G B 87 38.111 163.165 13.791 1.00 69.98 P
ATOM 3 OP1 G B 87 39.407 162.564 14.205 1.00 68.65 O
ATOM 4 OP2 G B 87 37.398 162.621 12.607 1.00 70.85 O
ATOM 5 O5' G B 87 37.087 163.138 15.011 1.00 69.26 O
ATOM 6 C5' G B 87 37.538 163.241 16.371 1.00 67.92 C
ATOM 7 C4' G B 87 36.980 162.097 17.178 1.00 66.07 C
ATOM 8 O4' G B 87 35.531 162.150 17.089 1.00 66.45 O
ATOM 9 C3' G B 87 37.374 160.714 16.676 1.00 65.65 C
ATOM 10 O3' G B 87 37.401 159.812 17.771 1.00 64.97 O
ATOM 11 C2' G B 87 36.237 160.371 15.720 1.00 65.44 C
ATOM 12 O2' G B 87 36.046 158.986 15.531 1.00 63.97 O
ATOM 13 C1' G B 87 35.042 160.993 16.436 1.00 66.47 C
ATOM 14 N9 G B 87 33.979 161.414 15.530 1.00 68.47 N
ATOM 15 C8 G B 87 34.120 162.159 14.384 1.00 69.40 C
ATOM 16 N7 G B 87 32.987 162.394 13.784 1.00 70.08 N
ATOM 17 C5 G B 87 32.041 161.765 14.578 1.00 70.95 C
ATOM 18 C6 G B 87 30.637 161.680 14.432 1.00 72.18 C
ATOM 19 O6 G B 87 29.922 162.156 13.541 1.00 73.97 O
ATOM 20 N1 G B 87 30.062 160.951 15.464 1.00 72.24 N
ATOM 21 C2 G B 87 30.748 160.378 16.503 1.00 71.76 C
ATOM 22 N2 G B 87 30.009 159.713 17.397 1.00 72.72 N
ATOM 23 N3 G B 87 32.058 160.449 16.652 1.00 70.87 N
ATOM 24 C4 G B 87 32.638 161.154 15.660 1.00 70.10 C
ATOM 25 P A B 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 26 OP1 A B 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 27 OP2 A B 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 28 O5' A B 88 39.126 159.544 19.560 1.00 62.63 O
TER
Atoms:
OP1: (39.810,159.455,17.166)
OP2: (38.425,157.572,18.222)
C3': (39.717,160.385,22.249)
C1': (37.692,161.545,22.477)
C5': (39.843,160.775,19.726)
O4': (38.186,161.776,21.168)
C8: (36.371,159.692,21.333)
O2': (39.509,162.200,23.874)
C6: (34.160,158.461,23.775)
C5: (35.091,159.062,22.908)
C4: (35.841,160.106,23.419)
P: (38.749,159.013,18.112)
C4': (39.573,161.351,21.090)
C2': (38.878,161.071,23.314)
C2: (34.857,159.970,25.383)
N1: (34.064,158.951,25.030)
N3: (35.772,160.616,24.663)
N6: (33.375,157.437,23.426)
N7: (35.433,158.813,21.586)
N9: (36.676,160.499,22.401)
O5': (39.126,159.544,19.560)
O3': (41.069,160.168,22.631)
OP2: (38.425,157.572,18.222)
C3': (39.717,160.385,22.249)
C1': (37.692,161.545,22.477)
C5': (39.843,160.775,19.726)
O4': (38.186,161.776,21.168)
C8: (36.371,159.692,21.333)
O2': (39.509,162.200,23.874)
C6: (34.160,158.461,23.775)
C5: (35.091,159.062,22.908)
C4: (35.841,160.106,23.419)
P: (38.749,159.013,18.112)
C4': (39.573,161.351,21.090)
C2': (38.878,161.071,23.314)
C2: (34.857,159.970,25.383)
N1: (34.064,158.951,25.030)
N3: (35.772,160.616,24.663)
N6: (33.375,157.437,23.426)
N7: (35.433,158.813,21.586)
N9: (36.676,160.499,22.401)
O5': (39.126,159.544,19.560)
O3': (41.069,160.168,22.631)
OP1: (39.407,162.564,14.205)
OP2: (37.398,162.621,12.607)
C3': (37.374,160.714,16.676)
C1': (35.042,160.993,16.436)
C5': (37.538,163.241,16.371)
O6: (29.922,162.156,13.541)
O4': (35.531,162.150,17.089)
C8: (34.120,162.159,14.384)
C2: (30.748,160.378,16.503)
C6: (30.637,161.680,14.432)
C5: (32.041,161.765,14.578)
C4: (32.638,161.154,15.660)
P: (38.111,163.165,13.791)
C4': (36.980,162.097,17.178)
C2': (36.237,160.371,15.720)
O2': (36.046,158.986,15.531)
N1: (30.062,160.951,15.464)
N2: (30.009,159.713,17.397)
N3: (32.058,160.449,16.652)
N7: (32.987,162.394,13.784)
N9: (33.979,161.414,15.530)
O5': (37.087,163.138,15.011)
O3': (37.401,159.812,17.771)
OP2: (37.398,162.621,12.607)
C3': (37.374,160.714,16.676)
C1': (35.042,160.993,16.436)
C5': (37.538,163.241,16.371)
O6: (29.922,162.156,13.541)
O4': (35.531,162.150,17.089)
C8: (34.120,162.159,14.384)
C2: (30.748,160.378,16.503)
C6: (30.637,161.680,14.432)
C5: (32.041,161.765,14.578)
C4: (32.638,161.154,15.660)
P: (38.111,163.165,13.791)
C4': (36.980,162.097,17.178)
C2': (36.237,160.371,15.720)
O2': (36.046,158.986,15.531)
N1: (30.062,160.951,15.464)
N2: (30.009,159.713,17.397)
N3: (32.058,160.449,16.652)
N7: (32.987,162.394,13.784)
N9: (33.979,161.414,15.530)
O5': (37.087,163.138,15.011)
O3': (37.401,159.812,17.771)
Image (generated by PyMOL):