Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02003:02002
Extra
PDB:
ATOM 1 O3' C A2002 53.519 137.480 88.077 1.00 44.11 O
ATOM 2 P U A2003 52.551 136.342 87.489 1.00 44.09 P
ATOM 3 OP1 U A2003 53.386 135.133 87.293 1.00 45.19 O
ATOM 4 OP2 U A2003 51.828 136.918 86.336 1.00 46.27 O
ATOM 5 O5' U A2003 51.465 136.093 88.629 1.00 40.54 O
ATOM 6 C5' U A2003 51.831 135.527 89.895 1.00 41.17 C
ATOM 7 C4' U A2003 50.677 135.633 90.860 1.00 40.90 C
ATOM 8 O4' U A2003 50.320 137.029 90.997 1.00 41.96 O
ATOM 9 C3' U A2003 49.393 134.974 90.401 1.00 41.56 C
ATOM 10 O3' U A2003 49.345 133.599 90.708 1.00 39.97 O
ATOM 11 C2' U A2003 48.336 135.760 91.146 1.00 42.27 C
ATOM 12 O2' U A2003 48.284 135.380 92.501 1.00 45.65 O
ATOM 13 C1' U A2003 48.911 137.167 91.052 1.00 43.51 C
ATOM 14 N1 U A2003 48.475 137.904 89.852 1.00 46.67 N
ATOM 15 C2 U A2003 47.241 138.541 89.894 1.00 47.79 C
ATOM 16 O2 U A2003 46.493 138.481 90.859 1.00 48.41 O
ATOM 17 N3 U A2003 46.919 139.251 88.761 1.00 48.23 N
ATOM 18 C4 U A2003 47.684 139.391 87.615 1.00 48.99 C
ATOM 19 O4 U A2003 47.297 140.147 86.715 1.00 48.74 O
ATOM 20 C5 U A2003 48.930 138.681 87.639 1.00 47.65 C
ATOM 21 C6 U A2003 49.273 137.979 88.722 1.00 46.79 C
ATOM 22 P G A2004 48.641 132.604 89.674 1.00 43.26 P
ATOM 23 OP1 G A2004 48.991 131.198 90.035 1.00 43.65 O
ATOM 24 OP2 G A2004 48.956 133.115 88.307 1.00 37.38 O
ATOM 25 O5' G A2004 47.083 132.819 89.944 1.00 40.99 O
TER
ATOM 1 O3' A B2001 52.414 142.852 84.789 1.00 44.45 O
ATOM 2 P C B2002 51.723 141.403 84.853 1.00 44.03 P
ATOM 3 OP1 C B2002 52.346 140.630 83.756 1.00 43.76 O
ATOM 4 OP2 C B2002 50.251 141.566 84.881 1.00 45.24 O
ATOM 5 O5' C B2002 52.210 140.789 86.246 1.00 43.45 O
ATOM 6 C5' C B2002 53.547 140.259 86.389 1.00 43.71 C
ATOM 7 C4' C B2002 53.825 139.879 87.824 1.00 43.89 C
ATOM 8 O4' C B2002 53.520 141.009 88.678 1.00 45.48 O
ATOM 9 C3' C B2002 52.989 138.755 88.408 1.00 44.55 C
ATOM 10 O3' C B2002 53.519 137.480 88.077 1.00 44.11 O
ATOM 11 C2' C B2002 53.101 139.020 89.901 1.00 45.27 C
ATOM 12 O2' C B2002 54.324 138.584 90.447 1.00 46.61 O
ATOM 13 C1' C B2002 53.065 140.546 89.936 1.00 46.18 C
ATOM 14 N1 C B2002 51.721 141.093 90.199 1.00 48.41 N
ATOM 15 C2 C B2002 51.258 141.114 91.517 1.00 49.96 C
ATOM 16 O2 C B2002 51.981 140.650 92.412 1.00 54.19 O
ATOM 17 N3 C B2002 50.043 141.627 91.786 1.00 48.94 N
ATOM 18 C4 C B2002 49.289 142.097 90.797 1.00 49.17 C
ATOM 19 N4 C B2002 48.089 142.588 91.110 1.00 50.08 N
ATOM 20 C5 C B2002 49.728 142.083 89.443 1.00 48.86 C
ATOM 21 C6 C B2002 50.938 141.576 89.190 1.00 48.34 C
ATOM 22 P U B2003 52.551 136.342 87.489 1.00 44.09 P
ATOM 23 OP1 U B2003 53.386 135.133 87.293 1.00 45.19 O
ATOM 24 OP2 U B2003 51.828 136.918 86.336 1.00 46.27 O
ATOM 25 O5' U B2003 51.465 136.093 88.629 1.00 40.54 O
TER
ATOM 2 P U A2003 52.551 136.342 87.489 1.00 44.09 P
ATOM 3 OP1 U A2003 53.386 135.133 87.293 1.00 45.19 O
ATOM 4 OP2 U A2003 51.828 136.918 86.336 1.00 46.27 O
ATOM 5 O5' U A2003 51.465 136.093 88.629 1.00 40.54 O
ATOM 6 C5' U A2003 51.831 135.527 89.895 1.00 41.17 C
ATOM 7 C4' U A2003 50.677 135.633 90.860 1.00 40.90 C
ATOM 8 O4' U A2003 50.320 137.029 90.997 1.00 41.96 O
ATOM 9 C3' U A2003 49.393 134.974 90.401 1.00 41.56 C
ATOM 10 O3' U A2003 49.345 133.599 90.708 1.00 39.97 O
ATOM 11 C2' U A2003 48.336 135.760 91.146 1.00 42.27 C
ATOM 12 O2' U A2003 48.284 135.380 92.501 1.00 45.65 O
ATOM 13 C1' U A2003 48.911 137.167 91.052 1.00 43.51 C
ATOM 14 N1 U A2003 48.475 137.904 89.852 1.00 46.67 N
ATOM 15 C2 U A2003 47.241 138.541 89.894 1.00 47.79 C
ATOM 16 O2 U A2003 46.493 138.481 90.859 1.00 48.41 O
ATOM 17 N3 U A2003 46.919 139.251 88.761 1.00 48.23 N
ATOM 18 C4 U A2003 47.684 139.391 87.615 1.00 48.99 C
ATOM 19 O4 U A2003 47.297 140.147 86.715 1.00 48.74 O
ATOM 20 C5 U A2003 48.930 138.681 87.639 1.00 47.65 C
ATOM 21 C6 U A2003 49.273 137.979 88.722 1.00 46.79 C
ATOM 22 P G A2004 48.641 132.604 89.674 1.00 43.26 P
ATOM 23 OP1 G A2004 48.991 131.198 90.035 1.00 43.65 O
ATOM 24 OP2 G A2004 48.956 133.115 88.307 1.00 37.38 O
ATOM 25 O5' G A2004 47.083 132.819 89.944 1.00 40.99 O
TER
ATOM 1 O3' A B2001 52.414 142.852 84.789 1.00 44.45 O
ATOM 2 P C B2002 51.723 141.403 84.853 1.00 44.03 P
ATOM 3 OP1 C B2002 52.346 140.630 83.756 1.00 43.76 O
ATOM 4 OP2 C B2002 50.251 141.566 84.881 1.00 45.24 O
ATOM 5 O5' C B2002 52.210 140.789 86.246 1.00 43.45 O
ATOM 6 C5' C B2002 53.547 140.259 86.389 1.00 43.71 C
ATOM 7 C4' C B2002 53.825 139.879 87.824 1.00 43.89 C
ATOM 8 O4' C B2002 53.520 141.009 88.678 1.00 45.48 O
ATOM 9 C3' C B2002 52.989 138.755 88.408 1.00 44.55 C
ATOM 10 O3' C B2002 53.519 137.480 88.077 1.00 44.11 O
ATOM 11 C2' C B2002 53.101 139.020 89.901 1.00 45.27 C
ATOM 12 O2' C B2002 54.324 138.584 90.447 1.00 46.61 O
ATOM 13 C1' C B2002 53.065 140.546 89.936 1.00 46.18 C
ATOM 14 N1 C B2002 51.721 141.093 90.199 1.00 48.41 N
ATOM 15 C2 C B2002 51.258 141.114 91.517 1.00 49.96 C
ATOM 16 O2 C B2002 51.981 140.650 92.412 1.00 54.19 O
ATOM 17 N3 C B2002 50.043 141.627 91.786 1.00 48.94 N
ATOM 18 C4 C B2002 49.289 142.097 90.797 1.00 49.17 C
ATOM 19 N4 C B2002 48.089 142.588 91.110 1.00 50.08 N
ATOM 20 C5 C B2002 49.728 142.083 89.443 1.00 48.86 C
ATOM 21 C6 C B2002 50.938 141.576 89.190 1.00 48.34 C
ATOM 22 P U B2003 52.551 136.342 87.489 1.00 44.09 P
ATOM 23 OP1 U B2003 53.386 135.133 87.293 1.00 45.19 O
ATOM 24 OP2 U B2003 51.828 136.918 86.336 1.00 46.27 O
ATOM 25 O5' U B2003 51.465 136.093 88.629 1.00 40.54 O
TER
Atoms:
C4: (47.684,139.391,87.615)
N3: (46.919,139.251,88.761)
OP1: (53.386,135.133,87.293)
OP2: (51.828,136.918,86.336)
C2: (47.241,138.541,89.894)
C1': (48.911,137.167,91.052)
C3': (49.393,134.974,90.401)
O5': (51.465,136.093,88.629)
O4': (50.320,137.029,90.997)
C5': (51.831,135.527,89.895)
P: (52.551,136.342,87.489)
C4': (50.677,135.633,90.860)
C2': (48.336,135.760,91.146)
O2': (48.284,135.380,92.501)
N1: (48.475,137.904,89.852)
O4: (47.297,140.147,86.715)
O2: (46.493,138.481,90.859)
C6: (49.273,137.979,88.722)
C5: (48.930,138.681,87.639)
O3': (49.345,133.599,90.708)
N3: (46.919,139.251,88.761)
OP1: (53.386,135.133,87.293)
OP2: (51.828,136.918,86.336)
C2: (47.241,138.541,89.894)
C1': (48.911,137.167,91.052)
C3': (49.393,134.974,90.401)
O5': (51.465,136.093,88.629)
O4': (50.320,137.029,90.997)
C5': (51.831,135.527,89.895)
P: (52.551,136.342,87.489)
C4': (50.677,135.633,90.860)
C2': (48.336,135.760,91.146)
O2': (48.284,135.380,92.501)
N1: (48.475,137.904,89.852)
O4: (47.297,140.147,86.715)
O2: (46.493,138.481,90.859)
C6: (49.273,137.979,88.722)
C5: (48.930,138.681,87.639)
O3': (49.345,133.599,90.708)
C2: (51.258,141.114,91.517)
OP1: (52.346,140.630,83.756)
OP2: (50.251,141.566,84.881)
C4: (49.289,142.097,90.797)
O5': (52.210,140.789,86.246)
C3': (52.989,138.755,88.408)
C1': (53.065,140.546,89.936)
O4': (53.520,141.009,88.678)
C5': (53.547,140.259,86.389)
P: (51.723,141.403,84.853)
O2: (51.981,140.650,92.412)
C4': (53.825,139.879,87.824)
C2': (53.101,139.020,89.901)
O2': (54.324,138.584,90.447)
N1: (51.721,141.093,90.199)
N3: (50.043,141.627,91.786)
N4: (48.089,142.588,91.110)
C6: (50.938,141.576,89.190)
C5: (49.728,142.083,89.443)
O3': (53.519,137.480,88.077)
OP1: (52.346,140.630,83.756)
OP2: (50.251,141.566,84.881)
C4: (49.289,142.097,90.797)
O5': (52.210,140.789,86.246)
C3': (52.989,138.755,88.408)
C1': (53.065,140.546,89.936)
O4': (53.520,141.009,88.678)
C5': (53.547,140.259,86.389)
P: (51.723,141.403,84.853)
O2: (51.981,140.650,92.412)
C4': (53.825,139.879,87.824)
C2': (53.101,139.020,89.901)
O2': (54.324,138.584,90.447)
N1: (51.721,141.093,90.199)
N3: (50.043,141.627,91.786)
N4: (48.089,142.588,91.110)
C6: (50.938,141.576,89.190)
C5: (49.728,142.083,89.443)
O3': (53.519,137.480,88.077)
Image (generated by PyMOL):