ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RW6:H28:H27

Extra

PDB:
ATOM 1 O3' G A 27 -0.308 -42.128 -0.914 1.00 43.75 O
ATOM 2 P A A 28 0.650 -43.372 -0.571 1.00 51.17 P
ATOM 3 OP1 A A 28 0.035 -44.559 -1.205 1.00 42.20 O
ATOM 4 OP2 A A 28 0.886 -43.391 0.891 1.00 53.62 O
ATOM 5 O5' A A 28 2.040 -43.045 -1.317 1.00 47.41 O
ATOM 6 C5' A A 28 3.157 -43.919 -1.112 1.00 41.89 C
ATOM 7 C4' A A 28 4.054 -44.035 -2.339 1.00 43.17 C
ATOM 8 O4' A A 28 3.334 -44.709 -3.400 1.00 38.51 O
ATOM 9 C3' A A 28 4.499 -42.709 -2.943 1.00 41.72 C
ATOM 10 O3' A A 28 5.722 -42.267 -2.365 1.00 45.37 O
ATOM 11 C2' A A 28 4.653 -43.014 -4.436 1.00 42.42 C
ATOM 12 O2' A A 28 5.921 -43.545 -4.804 1.00 41.01 O
ATOM 13 C1' A A 28 3.537 -44.034 -4.626 1.00 43.29 C
ATOM 14 N9 A A 28 2.293 -43.411 -5.057 1.00 40.59 N
ATOM 15 C8 A A 28 1.152 -43.133 -4.342 1.00 36.76 C
ATOM 16 N7 A A 28 0.211 -42.564 -5.077 1.00 35.40 N
ATOM 17 C5 A A 28 0.774 -42.470 -6.348 1.00 32.93 C
ATOM 18 C6 A A 28 0.319 -41.961 -7.589 1.00 30.98 C
ATOM 19 N6 A A 28 -0.891 -41.426 -7.796 1.00 27.27 N
ATOM 20 N1 A A 28 1.172 -42.030 -8.635 1.00 33.03 N
ATOM 21 C2 A A 28 2.388 -42.571 -8.475 1.00 35.57 C
ATOM 22 N3 A A 28 2.930 -43.084 -7.373 1.00 36.16 N
ATOM 23 C4 A A 28 2.062 -42.992 -6.344 1.00 38.77 C
ATOM 24 P A A 29 5.719 -40.777 -1.787 1.00 47.89 P
ATOM 25 OP1 A A 29 7.001 -40.543 -1.079 1.00 46.65 O
ATOM 26 OP2 A A 29 4.423 -40.574 -1.086 1.00 41.55 O
ATOM 27 O5' A A 29 5.763 -39.913 -3.142 1.00 46.00 O
TER

ATOM 1 O3' G B 26 -2.376 -39.840 4.137 1.00 42.95 O
ATOM 2 P G B 27 -1.584 -41.194 3.718 1.00 47.15 P
ATOM 3 OP1 G B 27 -2.600 -42.252 3.856 1.00 52.58 O
ATOM 4 OP2 G B 27 -0.287 -41.295 4.427 1.00 37.40 O
ATOM 5 O5' G B 27 -1.187 -41.069 2.164 1.00 48.71 O
ATOM 6 C5' G B 27 -2.135 -40.678 1.146 1.00 46.04 C
ATOM 7 C4' G B 27 -1.429 -40.142 -0.091 1.00 40.83 C
ATOM 8 O4' G B 27 -1.068 -38.734 0.046 1.00 41.96 O
ATOM 9 C3' G B 27 -0.099 -40.817 -0.388 1.00 43.21 C
ATOM 10 O3' G B 27 -0.308 -42.128 -0.914 1.00 43.75 O
ATOM 11 C2' G B 27 0.478 -39.804 -1.386 1.00 43.35 C
ATOM 12 O2' G B 27 -0.045 -39.853 -2.704 1.00 37.24 O
ATOM 13 C1' G B 27 0.132 -38.490 -0.667 1.00 40.46 C
ATOM 14 N9 G B 27 1.271 -38.321 0.208 1.00 37.19 N
ATOM 15 C8 G B 27 1.388 -38.682 1.527 1.00 40.66 C
ATOM 16 N7 G B 27 2.580 -38.456 2.013 1.00 41.34 N
ATOM 17 C5 G B 27 3.292 -37.937 0.937 1.00 37.11 C
ATOM 18 C6 G B 27 4.638 -37.512 0.848 1.00 39.85 C
ATOM 19 O6 G B 27 5.473 -37.510 1.759 1.00 43.49 O
ATOM 20 N1 G B 27 4.987 -37.063 -0.433 1.00 35.91 N
ATOM 21 C2 G B 27 4.107 -37.023 -1.491 1.00 38.09 C
ATOM 22 N2 G B 27 4.582 -36.561 -2.667 1.00 38.98 N
ATOM 23 N3 G B 27 2.839 -37.421 -1.408 1.00 38.28 N
ATOM 24 C4 G B 27 2.506 -37.871 -0.180 1.00 35.73 C
ATOM 25 P A B 28 0.650 -43.372 -0.571 1.00 51.17 P
ATOM 26 OP1 A B 28 0.035 -44.559 -1.205 1.00 42.20 O
ATOM 27 OP2 A B 28 0.886 -43.391 0.891 1.00 53.62 O
ATOM 28 O5' A B 28 2.040 -43.045 -1.317 1.00 47.41 O
TER

Atoms:
OP1: (0.035,-44.559,-1.205)
OP2: (0.886,-43.391,0.891)
C3': (4.499,-42.709,-2.943)
C1': (3.537,-44.034,-4.626)
C5': (3.157,-43.919,-1.112)
O4': (3.334,-44.709,-3.400)
C8: (1.152,-43.133,-4.342)
O2': (5.921,-43.545,-4.804)
C6: (0.319,-41.961,-7.589)
C5: (0.774,-42.470,-6.348)
C4: (2.062,-42.992,-6.344)
P: (0.650,-43.372,-0.571)
C4': (4.054,-44.035,-2.339)
C2': (4.653,-43.014,-4.436)
C2: (2.388,-42.571,-8.475)
N1: (1.172,-42.030,-8.635)
N3: (2.930,-43.084,-7.373)
N6: (-0.891,-41.426,-7.796)
N7: (0.211,-42.564,-5.077)
N9: (2.293,-43.411,-5.057)
O5': (2.040,-43.045,-1.317)
O3': (5.722,-42.267,-2.365)
OP1: (-2.600,-42.252,3.856)
OP2: (-0.287,-41.295,4.427)
C3': (-0.099,-40.817,-0.388)
C1': (0.132,-38.490,-0.667)
C5': (-2.135,-40.678,1.146)
O6: (5.473,-37.510,1.759)
O4': (-1.068,-38.734,0.046)
C8: (1.388,-38.682,1.527)
C2: (4.107,-37.023,-1.491)
C6: (4.638,-37.512,0.848)
C5: (3.292,-37.937,0.937)
C4: (2.506,-37.871,-0.180)
P: (-1.584,-41.194,3.718)
C4': (-1.429,-40.142,-0.091)
C2': (0.478,-39.804,-1.386)
O2': (-0.045,-39.853,-2.704)
N1: (4.987,-37.063,-0.433)
N2: (4.582,-36.561,-2.667)
N3: (2.839,-37.421,-1.408)
N7: (2.580,-38.456,2.013)
N9: (1.271,-38.321,0.208)
O5': (-1.187,-41.069,2.164)
O3': (-0.308,-42.128,-0.914)
Image (generated by PyMOL):
PyMOL image
show in jmol