ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:0553:0552

Extra

PDB:
ATOM 1 O3' G A 552 -5.395 94.914 96.869 1.00 59.26 O
ATOM 2 P A A 553 -4.849 93.954 98.038 1.00 56.37 P
ATOM 3 OP1 A A 553 -5.341 92.592 97.783 1.00 54.90 O
ATOM 4 OP2 A A 553 -5.058 94.578 99.351 1.00 57.69 O
ATOM 5 O5' A A 553 -3.295 93.880 97.738 1.00 57.34 O
ATOM 6 C5' A A 553 -2.823 93.123 96.610 1.00 57.36 C
ATOM 7 C4' A A 553 -1.333 93.215 96.505 1.00 56.13 C
ATOM 8 O4' A A 553 -0.974 94.553 96.114 1.00 56.58 O
ATOM 9 C3' A A 553 -0.570 92.992 97.796 1.00 55.06 C
ATOM 10 O3' A A 553 -0.381 91.616 98.010 1.00 54.31 O
ATOM 11 C2' A A 553 0.753 93.663 97.493 1.00 56.31 C
ATOM 12 O2' A A 553 1.551 92.824 96.673 1.00 54.83 O
ATOM 13 C1' A A 553 0.287 94.874 96.676 1.00 57.80 C
ATOM 14 N9 A A 553 0.152 96.121 97.423 1.00 58.53 N
ATOM 15 C8 A A 553 -1.003 96.720 97.847 1.00 60.09 C
ATOM 16 N7 A A 553 -0.812 97.869 98.458 1.00 61.39 N
ATOM 17 C5 A A 553 0.565 98.029 98.447 1.00 60.20 C
ATOM 18 C6 A A 553 1.414 99.058 98.939 1.00 60.46 C
ATOM 19 N6 A A 553 0.989 100.147 99.580 1.00 58.94 N
ATOM 20 N1 A A 553 2.737 98.915 98.746 1.00 60.35 N
ATOM 21 C2 A A 553 3.174 97.809 98.119 1.00 61.58 C
ATOM 22 N3 A A 553 2.482 96.775 97.623 1.00 60.40 N
ATOM 23 C4 A A 553 1.171 96.952 97.818 1.00 59.67 C
ATOM 24 P A A 554 -0.459 91.024 99.495 1.00 55.55 P
ATOM 25 OP1 A A 554 -0.579 89.525 99.319 1.00 52.50 O
ATOM 26 OP2 A A 554 -1.475 91.791 100.273 1.00 53.49 O
ATOM 27 O5' A A 554 0.950 91.366 100.163 1.00 55.40 O
TER

ATOM 1 O3' C B 551 -10.652 96.457 94.156 1.00 65.30 O
ATOM 2 P G B 552 -10.410 95.374 95.309 1.00 67.12 P
ATOM 3 OP1 G B 552 -10.284 94.043 94.621 1.00 66.38 O
ATOM 4 OP2 G B 552 -11.417 95.566 96.380 1.00 66.50 O
ATOM 5 O5' G B 552 -9.009 95.808 95.931 1.00 66.34 O
ATOM 6 C5' G B 552 -7.826 95.872 95.109 1.00 64.21 C
ATOM 7 C4' G B 552 -6.720 96.590 95.840 1.00 62.65 C
ATOM 8 O4' G B 552 -7.146 97.933 96.181 1.00 63.06 O
ATOM 9 C3' G B 552 -6.296 95.982 97.159 1.00 60.94 C
ATOM 10 O3' G B 552 -5.395 94.914 96.869 1.00 59.26 O
ATOM 11 C2' G B 552 -5.645 97.169 97.855 1.00 61.92 C
ATOM 12 O2' G B 552 -4.318 97.393 97.446 1.00 63.54 O
ATOM 13 C1' G B 552 -6.515 98.336 97.370 1.00 63.27 C
ATOM 14 N9 G B 552 -7.540 98.728 98.328 1.00 65.64 N
ATOM 15 C8 G B 552 -8.690 98.036 98.655 1.00 66.86 C
ATOM 16 N7 G B 552 -9.343 98.569 99.659 1.00 67.04 N
ATOM 17 C5 G B 552 -8.596 99.695 99.997 1.00 66.88 C
ATOM 18 C6 G B 552 -8.771 100.642 101.052 1.00 66.14 C
ATOM 19 O6 G B 552 -9.622 100.654 101.945 1.00 64.93 O
ATOM 20 N1 G B 552 -7.792 101.630 101.017 1.00 66.79 N
ATOM 21 C2 G B 552 -6.756 101.691 100.107 1.00 66.67 C
ATOM 22 N2 G B 552 -5.909 102.728 100.248 1.00 66.17 N
ATOM 23 N3 G B 552 -6.563 100.804 99.138 1.00 65.76 N
ATOM 24 C4 G B 552 -7.508 99.837 99.146 1.00 66.32 C
ATOM 25 P A B 553 -4.849 93.954 98.038 1.00 56.37 P
ATOM 26 OP1 A B 553 -5.341 92.592 97.783 1.00 54.90 O
ATOM 27 OP2 A B 553 -5.058 94.578 99.351 1.00 57.69 O
ATOM 28 O5' A B 553 -3.295 93.880 97.738 1.00 57.34 O
TER

Atoms:
OP1: (-5.341,92.592,97.783)
OP2: (-5.058,94.578,99.351)
C3': (-0.570,92.992,97.796)
C1': (0.287,94.874,96.676)
C5': (-2.823,93.123,96.610)
O4': (-0.974,94.553,96.114)
C8: (-1.003,96.720,97.847)
O2': (1.551,92.824,96.673)
C6: (1.414,99.058,98.939)
C5: (0.565,98.029,98.447)
C4: (1.171,96.952,97.818)
P: (-4.849,93.954,98.038)
C4': (-1.333,93.215,96.505)
C2': (0.753,93.663,97.493)
C2: (3.174,97.809,98.119)
N1: (2.737,98.915,98.746)
N3: (2.482,96.775,97.623)
N6: (0.989,100.147,99.580)
N7: (-0.812,97.869,98.458)
N9: (0.152,96.121,97.423)
O5': (-3.295,93.880,97.738)
O3': (-0.381,91.616,98.010)
OP1: (-10.284,94.043,94.621)
OP2: (-11.417,95.566,96.380)
C3': (-6.296,95.982,97.159)
C1': (-6.515,98.336,97.370)
C5': (-7.826,95.872,95.109)
O6: (-9.622,100.654,101.945)
O4': (-7.146,97.933,96.181)
C8: (-8.690,98.036,98.655)
C2: (-6.756,101.691,100.107)
C6: (-8.771,100.642,101.052)
C5: (-8.596,99.695,99.997)
C4: (-7.508,99.837,99.146)
P: (-10.410,95.374,95.309)
C4': (-6.720,96.590,95.840)
C2': (-5.645,97.169,97.855)
O2': (-4.318,97.393,97.446)
N1: (-7.792,101.630,101.017)
N2: (-5.909,102.728,100.248)
N3: (-6.563,100.804,99.138)
N7: (-9.343,98.569,99.659)
N9: (-7.540,98.728,98.328)
O5': (-9.009,95.808,95.931)
O3': (-5.395,94.914,96.869)
Image (generated by PyMOL):
PyMOL image
show in jmol