ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0708:0707

Extra

PDB:
ATOM 1 O3' G A 707 24.829 62.164 53.584 1.00 44.90 O
ATOM 2 P A A 708 26.432 62.123 53.552 1.00 44.19 P
ATOM 3 OP1 A A 708 26.845 60.977 52.696 1.00 42.75 O
ATOM 4 OP2 A A 708 26.925 62.207 54.943 1.00 44.57 O
ATOM 5 O5' A A 708 26.804 63.487 52.815 1.00 45.04 O
ATOM 6 C5' A A 708 26.501 63.679 51.416 1.00 44.38 C
ATOM 7 C4' A A 708 26.218 65.137 51.114 1.00 43.84 C
ATOM 8 O4' A A 708 24.922 65.532 51.641 1.00 42.95 O
ATOM 9 C3' A A 708 27.171 66.159 51.707 1.00 43.26 C
ATOM 10 O3' A A 708 28.407 66.229 51.001 1.00 42.73 O
ATOM 11 C2' A A 708 26.336 67.432 51.618 1.00 43.95 C
ATOM 12 O2' A A 708 26.239 67.958 50.309 1.00 44.24 O
ATOM 13 C1' A A 708 24.957 66.903 52.014 1.00 43.27 C
ATOM 14 N9 A A 708 24.748 66.999 53.459 1.00 43.71 N
ATOM 15 C8 A A 708 24.814 65.998 54.395 1.00 44.85 C
ATOM 16 N7 A A 708 24.611 66.406 55.625 1.00 44.43 N
ATOM 17 C5 A A 708 24.391 67.765 55.492 1.00 43.93 C
ATOM 18 C6 A A 708 24.130 68.770 56.431 1.00 44.35 C
ATOM 19 N6 A A 708 24.045 68.554 57.742 1.00 42.61 N
ATOM 20 N1 A A 708 23.961 70.029 55.971 1.00 45.73 N
ATOM 21 C2 A A 708 24.058 70.248 54.651 1.00 45.19 C
ATOM 22 N3 A A 708 24.305 69.385 53.669 1.00 44.51 N
ATOM 23 C4 A A 708 24.464 68.145 54.162 1.00 44.49 C
ATOM 24 P G A 709 29.787 66.098 51.814 1.00 42.13 P
ATOM 25 OP1 G A 709 30.909 66.456 50.920 1.00 42.77 O
ATOM 26 OP2 G A 709 29.793 64.778 52.481 1.00 43.06 O
ATOM 27 O5' G A 709 29.665 67.248 52.907 1.00 42.38 O
TER

ATOM 1 O3' C B 706 21.639 56.398 51.712 1.00 53.66 O
ATOM 2 P G B 707 23.145 56.812 52.037 1.00 54.49 P
ATOM 3 OP1 G B 707 23.959 56.489 50.832 1.00 54.30 O
ATOM 4 OP2 G B 707 23.522 56.246 53.363 1.00 53.57 O
ATOM 5 O5' G B 707 23.032 58.392 52.174 1.00 53.95 O
ATOM 6 C5' G B 707 23.949 59.146 52.977 1.00 50.07 C
ATOM 7 C4' G B 707 23.256 60.363 53.521 1.00 47.16 C
ATOM 8 O4' G B 707 22.172 59.942 54.384 1.00 47.99 O
ATOM 9 C3' G B 707 24.113 61.252 54.394 1.00 46.38 C
ATOM 10 O3' G B 707 24.829 62.164 53.584 1.00 44.90 O
ATOM 11 C2' G B 707 23.068 61.959 55.240 1.00 46.56 C
ATOM 12 O2' G B 707 22.420 62.981 54.518 1.00 44.48 O
ATOM 13 C1' G B 707 22.071 60.824 55.491 1.00 47.69 C
ATOM 14 N9 G B 707 22.367 60.062 56.703 1.00 48.54 N
ATOM 15 C8 G B 707 22.872 58.785 56.769 1.00 49.49 C
ATOM 16 N7 G B 707 23.077 58.377 57.991 1.00 50.13 N
ATOM 17 C5 G B 707 22.679 59.445 58.781 1.00 48.97 C
ATOM 18 C6 G B 707 22.686 59.592 60.188 1.00 48.91 C
ATOM 19 O6 G B 707 23.078 58.790 61.044 1.00 50.31 O
ATOM 20 N1 G B 707 22.179 60.827 60.574 1.00 47.79 N
ATOM 21 C2 G B 707 21.730 61.796 59.717 1.00 47.60 C
ATOM 22 N2 G B 707 21.263 62.909 60.284 1.00 48.99 N
ATOM 23 N3 G B 707 21.735 61.680 58.402 1.00 47.96 N
ATOM 24 C4 G B 707 22.220 60.486 58.005 1.00 48.41 C
ATOM 25 P A B 708 26.432 62.123 53.552 1.00 44.19 P
ATOM 26 OP1 A B 708 26.845 60.977 52.696 1.00 42.75 O
ATOM 27 OP2 A B 708 26.925 62.207 54.943 1.00 44.57 O
ATOM 28 O5' A B 708 26.804 63.487 52.815 1.00 45.04 O
TER

Atoms:
OP1: (26.845,60.977,52.696)
OP2: (26.925,62.207,54.943)
C3': (27.171,66.159,51.707)
C1': (24.957,66.903,52.014)
C5': (26.501,63.679,51.416)
O4': (24.922,65.532,51.641)
C8: (24.814,65.998,54.395)
O2': (26.239,67.958,50.309)
C6: (24.130,68.770,56.431)
C5: (24.391,67.765,55.492)
C4: (24.464,68.145,54.162)
P: (26.432,62.123,53.552)
C4': (26.218,65.137,51.114)
C2': (26.336,67.432,51.618)
C2: (24.058,70.248,54.651)
N1: (23.961,70.029,55.971)
N3: (24.305,69.385,53.669)
N6: (24.045,68.554,57.742)
N7: (24.611,66.406,55.625)
N9: (24.748,66.999,53.459)
O5': (26.804,63.487,52.815)
O3': (28.407,66.229,51.001)
OP1: (23.959,56.489,50.832)
OP2: (23.522,56.246,53.363)
C3': (24.113,61.252,54.394)
C1': (22.071,60.824,55.491)
C5': (23.949,59.146,52.977)
O6: (23.078,58.790,61.044)
O4': (22.172,59.942,54.384)
C8: (22.872,58.785,56.769)
C2: (21.730,61.796,59.717)
C6: (22.686,59.592,60.188)
C5: (22.679,59.445,58.781)
C4: (22.220,60.486,58.005)
P: (23.145,56.812,52.037)
C4': (23.256,60.363,53.521)
C2': (23.068,61.959,55.240)
O2': (22.420,62.981,54.518)
N1: (22.179,60.827,60.574)
N2: (21.263,62.909,60.284)
N3: (21.735,61.680,58.402)
N7: (23.077,58.377,57.991)
N9: (22.367,60.062,56.703)
O5': (23.032,58.392,52.174)
O3': (24.829,62.164,53.584)
Image (generated by PyMOL):
PyMOL image
show in jmol