ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A301:A300

Extra

PDB:
ATOM 1 O3' G A 300 -54.923 -63.335 97.971 1.00125.02 O
ATOM 2 P A A 301 -54.090 -64.663 97.637 1.00 92.04 P
ATOM 3 OP1 A A 301 -54.745 -65.413 96.548 1.00 68.10 O
ATOM 4 OP2 A A 301 -53.809 -65.322 98.930 1.00100.39 O
ATOM 5 O5' A A 301 -52.717 -64.095 97.066 1.00 78.05 O
ATOM 6 C5' A A 301 -52.559 -63.901 95.669 1.00 76.17 C
ATOM 7 C4' A A 301 -53.413 -62.756 95.155 1.00 71.87 C
ATOM 8 O4' A A 301 -53.160 -61.548 95.914 1.00 76.24 O
ATOM 9 C3' A A 301 -53.122 -62.411 93.707 1.00 63.76 C
ATOM 10 O3' A A 301 -54.070 -63.076 92.893 1.00 59.87 O
ATOM 11 C2' A A 301 -53.300 -60.900 93.630 1.00 69.93 C
ATOM 12 O2' A A 301 -54.606 -60.556 93.215 1.00 77.29 O
ATOM 13 C1' A A 301 -53.072 -60.429 95.059 1.00 68.95 C
ATOM 14 N9 A A 301 -51.782 -59.801 95.291 1.00 61.60 N
ATOM 15 C8 A A 301 -51.024 -59.920 96.419 1.00 67.59 C
ATOM 16 N7 A A 301 -49.903 -59.244 96.377 1.00 71.29 N
ATOM 17 C5 A A 301 -49.930 -58.636 95.130 1.00 69.54 C
ATOM 18 C6 A A 301 -49.023 -57.775 94.471 1.00 63.01 C
ATOM 19 N6 A A 301 -47.866 -57.363 95.004 1.00 61.18 N
ATOM 20 N1 A A 301 -49.353 -57.356 93.232 1.00 57.53 N
ATOM 21 C2 A A 301 -50.508 -57.768 92.699 1.00 62.62 C
ATOM 22 N3 A A 301 -51.435 -58.569 93.218 1.00 63.41 N
ATOM 23 C4 A A 301 -51.083 -58.973 94.447 1.00 66.36 C
ATOM 24 P A A 302 -53.549 -63.906 91.628 1.00 82.65 P
ATOM 25 OP1 A A 302 -54.451 -65.059 91.417 1.00 73.98 O
ATOM 26 OP2 A A 302 -52.093 -64.120 91.813 1.00 85.99 O
ATOM 27 O5' A A 302 -53.772 -62.870 90.438 1.00 70.61 O
TER

ATOM 1 O3' C B 299 -58.736 -63.155 103.018 1.00121.80 O
ATOM 2 P G B 300 -58.043 -64.389 102.282 1.00143.65 P
ATOM 3 OP1 G B 300 -59.058 -65.091 101.473 1.00127.39 O
ATOM 4 OP2 G B 300 -57.303 -65.127 103.319 1.00134.96 O
ATOM 5 O5' G B 300 -56.962 -63.693 101.325 1.00140.95 O
ATOM 6 C5' G B 300 -57.345 -62.994 100.135 1.00136.16 C
ATOM 7 C4' G B 300 -56.218 -62.112 99.610 1.00131.98 C
ATOM 8 O4' G B 300 -55.869 -61.128 100.613 1.00132.50 O
ATOM 9 C3' G B 300 -54.908 -62.822 99.300 1.00120.89 C
ATOM 10 O3' G B 300 -54.923 -63.335 97.971 1.00125.02 O
ATOM 11 C2' G B 300 -53.883 -61.704 99.451 1.00118.95 C
ATOM 12 O2' G B 300 -53.761 -60.926 98.278 1.00114.21 O
ATOM 13 C1' G B 300 -54.483 -60.856 100.566 1.00128.75 C
ATOM 14 N9 G B 300 -53.937 -61.120 101.891 1.00133.85 N
ATOM 15 C8 G B 300 -54.608 -61.632 102.974 1.00129.90 C
ATOM 16 N7 G B 300 -53.864 -61.753 104.037 1.00135.54 N
ATOM 17 C5 G B 300 -52.618 -61.288 103.632 1.00136.05 C
ATOM 18 C6 G B 300 -51.403 -61.173 104.347 1.00132.20 C
ATOM 19 O6 G B 300 -51.174 -61.470 105.526 1.00141.78 O
ATOM 20 N1 G B 300 -50.381 -60.653 103.560 1.00127.11 N
ATOM 21 C2 G B 300 -50.517 -60.287 102.245 1.00125.35 C
ATOM 22 N2 G B 300 -49.424 -59.803 101.645 1.00115.32 N
ATOM 23 N3 G B 300 -51.646 -60.387 101.561 1.00136.64 N
ATOM 24 C4 G B 300 -52.649 -60.894 102.315 1.00137.23 C
ATOM 25 P A B 301 -54.090 -64.663 97.637 1.00 92.04 P
ATOM 26 OP1 A B 301 -54.745 -65.413 96.548 1.00 68.10 O
ATOM 27 OP2 A B 301 -53.809 -65.322 98.930 1.00100.39 O
ATOM 28 O5' A B 301 -52.717 -64.095 97.066 1.00 78.05 O
TER

Atoms:
OP1: (-54.745,-65.413,96.548)
OP2: (-53.809,-65.322,98.930)
C3': (-53.122,-62.411,93.707)
C1': (-53.072,-60.429,95.059)
C5': (-52.559,-63.901,95.669)
O4': (-53.160,-61.548,95.914)
C8: (-51.024,-59.920,96.419)
O2': (-54.606,-60.556,93.215)
C6: (-49.023,-57.775,94.471)
C5: (-49.930,-58.636,95.130)
C4: (-51.083,-58.973,94.447)
P: (-54.090,-64.663,97.637)
C4': (-53.413,-62.756,95.155)
C2': (-53.300,-60.900,93.630)
C2: (-50.508,-57.768,92.699)
N1: (-49.353,-57.356,93.232)
N3: (-51.435,-58.569,93.218)
N6: (-47.866,-57.363,95.004)
N7: (-49.903,-59.244,96.377)
N9: (-51.782,-59.801,95.291)
O5': (-52.717,-64.095,97.066)
O3': (-54.070,-63.076,92.893)
OP1: (-59.058,-65.091,101.473)
OP2: (-57.303,-65.127,103.319)
C3': (-54.908,-62.822,99.300)
C1': (-54.483,-60.856,100.566)
C5': (-57.345,-62.994,100.135)
O6: (-51.174,-61.470,105.526)
O4': (-55.869,-61.128,100.613)
C8: (-54.608,-61.632,102.974)
C2: (-50.517,-60.287,102.245)
C6: (-51.403,-61.173,104.347)
C5: (-52.618,-61.288,103.632)
C4: (-52.649,-60.894,102.315)
P: (-58.043,-64.389,102.282)
C4': (-56.218,-62.112,99.610)
C2': (-53.883,-61.704,99.451)
O2': (-53.761,-60.926,98.278)
N1: (-50.381,-60.653,103.560)
N2: (-49.424,-59.803,101.645)
N3: (-51.646,-60.387,101.561)
N7: (-53.864,-61.753,104.037)
N9: (-53.937,-61.120,101.891)
O5': (-56.962,-63.693,101.325)
O3': (-54.923,-63.335,97.971)
Image (generated by PyMOL):
PyMOL image
show in jmol