Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1N8R:A1235:A1234
Extra
PDB:
ATOM 1 O3' C A1234 2.670 83.264 63.720 1.00 44.60 O
ATOM 2 P U A1235 3.573 83.008 62.436 1.00 45.33 P
ATOM 3 OP1 U A1235 2.659 82.502 61.381 1.00 46.84 O
ATOM 4 OP2 U A1235 4.729 82.177 62.885 1.00 45.44 O
ATOM 5 O5' U A1235 4.085 84.464 62.045 1.00 46.08 O
ATOM 6 C5' U A1235 3.147 85.545 61.856 1.00 46.55 C
ATOM 7 C4' U A1235 3.876 86.849 61.614 1.00 47.58 C
ATOM 8 O4' U A1235 4.458 87.365 62.840 1.00 48.21 O
ATOM 9 C3' U A1235 5.050 86.827 60.651 1.00 47.29 C
ATOM 10 O3' U A1235 4.642 86.828 59.304 1.00 47.26 O
ATOM 11 C2' U A1235 5.741 88.130 60.999 1.00 48.45 C
ATOM 12 O2' U A1235 5.020 89.223 60.471 1.00 49.25 O
ATOM 13 C1' U A1235 5.617 88.123 62.523 1.00 49.04 C
ATOM 14 N1 U A1235 6.783 87.513 63.186 1.00 50.12 N
ATOM 15 C2 U A1235 7.729 88.369 63.718 1.00 50.72 C
ATOM 16 O2 U A1235 7.642 89.583 63.636 1.00 50.53 O
ATOM 17 N3 U A1235 8.789 87.752 64.339 1.00 51.37 N
ATOM 18 C4 U A1235 9.004 86.395 64.470 1.00 51.41 C
ATOM 19 O4 U A1235 10.021 85.991 65.039 1.00 52.17 O
ATOM 20 C5 U A1235 7.992 85.577 63.884 1.00 51.32 C
ATOM 21 C6 U A1235 6.942 86.147 63.278 1.00 50.64 C
ATOM 22 P C A1236 5.514 86.044 58.218 1.00 48.65 P
ATOM 23 OP1 C A1236 4.736 86.009 56.958 1.00 48.36 O
ATOM 24 OP2 C A1236 5.952 84.779 58.832 1.00 49.21 O
ATOM 25 O5' C A1236 6.782 86.986 58.004 1.00 48.32 O
TER
ATOM 1 O3' A B1233 5.152 80.232 68.454 1.00 42.46 O
ATOM 2 P C B1234 5.485 80.403 66.900 1.00 45.15 P
ATOM 3 OP1 C B1234 4.854 79.257 66.195 1.00 45.25 O
ATOM 4 OP2 C B1234 6.951 80.635 66.762 1.00 46.14 O
ATOM 5 O5' C B1234 4.695 81.731 66.509 1.00 43.22 O
ATOM 6 C5' C B1234 3.267 81.706 66.441 1.00 43.23 C
ATOM 7 C4' C B1234 2.709 83.067 66.106 1.00 43.75 C
ATOM 8 O4' C B1234 2.969 84.000 67.176 1.00 43.84 O
ATOM 9 C3' C B1234 3.270 83.753 64.884 1.00 43.73 C
ATOM 10 O3' C B1234 2.670 83.264 63.720 1.00 44.60 O
ATOM 11 C2' C B1234 2.888 85.197 65.127 1.00 44.51 C
ATOM 12 O2' C B1234 1.542 85.437 64.805 1.00 46.36 O
ATOM 13 C1' C B1234 3.118 85.300 66.634 1.00 44.30 C
ATOM 14 N1 C B1234 4.487 85.750 66.897 1.00 44.18 N
ATOM 15 C2 C B1234 4.727 87.118 66.981 1.00 44.24 C
ATOM 16 O2 C B1234 3.769 87.908 66.846 1.00 44.54 O
ATOM 17 N3 C B1234 5.990 87.553 67.199 1.00 43.90 N
ATOM 18 C4 C B1234 6.983 86.678 67.341 1.00 42.87 C
ATOM 19 N4 C B1234 8.205 87.161 67.583 1.00 41.76 N
ATOM 20 C5 C B1234 6.766 85.273 67.253 1.00 43.36 C
ATOM 21 C6 C B1234 5.514 84.856 67.037 1.00 43.13 C
ATOM 22 P U B1235 3.573 83.008 62.436 1.00 45.33 P
ATOM 23 OP1 U B1235 2.659 82.502 61.381 1.00 46.84 O
ATOM 24 OP2 U B1235 4.729 82.177 62.885 1.00 45.44 O
ATOM 25 O5' U B1235 4.085 84.464 62.045 1.00 46.08 O
TER
ATOM 2 P U A1235 3.573 83.008 62.436 1.00 45.33 P
ATOM 3 OP1 U A1235 2.659 82.502 61.381 1.00 46.84 O
ATOM 4 OP2 U A1235 4.729 82.177 62.885 1.00 45.44 O
ATOM 5 O5' U A1235 4.085 84.464 62.045 1.00 46.08 O
ATOM 6 C5' U A1235 3.147 85.545 61.856 1.00 46.55 C
ATOM 7 C4' U A1235 3.876 86.849 61.614 1.00 47.58 C
ATOM 8 O4' U A1235 4.458 87.365 62.840 1.00 48.21 O
ATOM 9 C3' U A1235 5.050 86.827 60.651 1.00 47.29 C
ATOM 10 O3' U A1235 4.642 86.828 59.304 1.00 47.26 O
ATOM 11 C2' U A1235 5.741 88.130 60.999 1.00 48.45 C
ATOM 12 O2' U A1235 5.020 89.223 60.471 1.00 49.25 O
ATOM 13 C1' U A1235 5.617 88.123 62.523 1.00 49.04 C
ATOM 14 N1 U A1235 6.783 87.513 63.186 1.00 50.12 N
ATOM 15 C2 U A1235 7.729 88.369 63.718 1.00 50.72 C
ATOM 16 O2 U A1235 7.642 89.583 63.636 1.00 50.53 O
ATOM 17 N3 U A1235 8.789 87.752 64.339 1.00 51.37 N
ATOM 18 C4 U A1235 9.004 86.395 64.470 1.00 51.41 C
ATOM 19 O4 U A1235 10.021 85.991 65.039 1.00 52.17 O
ATOM 20 C5 U A1235 7.992 85.577 63.884 1.00 51.32 C
ATOM 21 C6 U A1235 6.942 86.147 63.278 1.00 50.64 C
ATOM 22 P C A1236 5.514 86.044 58.218 1.00 48.65 P
ATOM 23 OP1 C A1236 4.736 86.009 56.958 1.00 48.36 O
ATOM 24 OP2 C A1236 5.952 84.779 58.832 1.00 49.21 O
ATOM 25 O5' C A1236 6.782 86.986 58.004 1.00 48.32 O
TER
ATOM 1 O3' A B1233 5.152 80.232 68.454 1.00 42.46 O
ATOM 2 P C B1234 5.485 80.403 66.900 1.00 45.15 P
ATOM 3 OP1 C B1234 4.854 79.257 66.195 1.00 45.25 O
ATOM 4 OP2 C B1234 6.951 80.635 66.762 1.00 46.14 O
ATOM 5 O5' C B1234 4.695 81.731 66.509 1.00 43.22 O
ATOM 6 C5' C B1234 3.267 81.706 66.441 1.00 43.23 C
ATOM 7 C4' C B1234 2.709 83.067 66.106 1.00 43.75 C
ATOM 8 O4' C B1234 2.969 84.000 67.176 1.00 43.84 O
ATOM 9 C3' C B1234 3.270 83.753 64.884 1.00 43.73 C
ATOM 10 O3' C B1234 2.670 83.264 63.720 1.00 44.60 O
ATOM 11 C2' C B1234 2.888 85.197 65.127 1.00 44.51 C
ATOM 12 O2' C B1234 1.542 85.437 64.805 1.00 46.36 O
ATOM 13 C1' C B1234 3.118 85.300 66.634 1.00 44.30 C
ATOM 14 N1 C B1234 4.487 85.750 66.897 1.00 44.18 N
ATOM 15 C2 C B1234 4.727 87.118 66.981 1.00 44.24 C
ATOM 16 O2 C B1234 3.769 87.908 66.846 1.00 44.54 O
ATOM 17 N3 C B1234 5.990 87.553 67.199 1.00 43.90 N
ATOM 18 C4 C B1234 6.983 86.678 67.341 1.00 42.87 C
ATOM 19 N4 C B1234 8.205 87.161 67.583 1.00 41.76 N
ATOM 20 C5 C B1234 6.766 85.273 67.253 1.00 43.36 C
ATOM 21 C6 C B1234 5.514 84.856 67.037 1.00 43.13 C
ATOM 22 P U B1235 3.573 83.008 62.436 1.00 45.33 P
ATOM 23 OP1 U B1235 2.659 82.502 61.381 1.00 46.84 O
ATOM 24 OP2 U B1235 4.729 82.177 62.885 1.00 45.44 O
ATOM 25 O5' U B1235 4.085 84.464 62.045 1.00 46.08 O
TER
Atoms:
C4: (9.004,86.395,64.470)
N3: (8.789,87.752,64.339)
OP1: (2.659,82.502,61.381)
OP2: (4.729,82.177,62.885)
C2: (7.729,88.369,63.718)
C1': (5.617,88.123,62.523)
C3': (5.050,86.827,60.651)
O5': (4.085,84.464,62.045)
O4': (4.458,87.365,62.840)
C5': (3.147,85.545,61.856)
P: (3.573,83.008,62.436)
C4': (3.876,86.849,61.614)
C2': (5.741,88.130,60.999)
O2': (5.020,89.223,60.471)
N1: (6.783,87.513,63.186)
O4: (10.021,85.991,65.039)
O2: (7.642,89.583,63.636)
C6: (6.942,86.147,63.278)
C5: (7.992,85.577,63.884)
O3': (4.642,86.828,59.304)
N3: (8.789,87.752,64.339)
OP1: (2.659,82.502,61.381)
OP2: (4.729,82.177,62.885)
C2: (7.729,88.369,63.718)
C1': (5.617,88.123,62.523)
C3': (5.050,86.827,60.651)
O5': (4.085,84.464,62.045)
O4': (4.458,87.365,62.840)
C5': (3.147,85.545,61.856)
P: (3.573,83.008,62.436)
C4': (3.876,86.849,61.614)
C2': (5.741,88.130,60.999)
O2': (5.020,89.223,60.471)
N1: (6.783,87.513,63.186)
O4: (10.021,85.991,65.039)
O2: (7.642,89.583,63.636)
C6: (6.942,86.147,63.278)
C5: (7.992,85.577,63.884)
O3': (4.642,86.828,59.304)
C2: (4.727,87.118,66.981)
OP1: (4.854,79.257,66.195)
OP2: (6.951,80.635,66.762)
C4: (6.983,86.678,67.341)
O5': (4.695,81.731,66.509)
C3': (3.270,83.753,64.884)
C1': (3.118,85.300,66.634)
O4': (2.969,84.000,67.176)
C5': (3.267,81.706,66.441)
P: (5.485,80.403,66.900)
O2: (3.769,87.908,66.846)
C4': (2.709,83.067,66.106)
C2': (2.888,85.197,65.127)
O2': (1.542,85.437,64.805)
N1: (4.487,85.750,66.897)
N3: (5.990,87.553,67.199)
N4: (8.205,87.161,67.583)
C6: (5.514,84.856,67.037)
C5: (6.766,85.273,67.253)
O3': (2.670,83.264,63.720)
OP1: (4.854,79.257,66.195)
OP2: (6.951,80.635,66.762)
C4: (6.983,86.678,67.341)
O5': (4.695,81.731,66.509)
C3': (3.270,83.753,64.884)
C1': (3.118,85.300,66.634)
O4': (2.969,84.000,67.176)
C5': (3.267,81.706,66.441)
P: (5.485,80.403,66.900)
O2: (3.769,87.908,66.846)
C4': (2.709,83.067,66.106)
C2': (2.888,85.197,65.127)
O2': (1.542,85.437,64.805)
N1: (4.487,85.750,66.897)
N3: (5.990,87.553,67.199)
N4: (8.205,87.161,67.583)
C6: (5.514,84.856,67.037)
C5: (6.766,85.273,67.253)
O3': (2.670,83.264,63.720)
Image (generated by PyMOL):