ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:088:087

Extra

PDB:
ATOM 1 O3' G A 87 36.771 159.510 17.914 1.00 60.78 O
ATOM 2 P A A 88 38.060 158.585 18.158 1.00 59.32 P
ATOM 3 OP1 A A 88 39.111 158.950 17.175 1.00 61.24 O
ATOM 4 OP2 A A 88 37.614 157.176 18.252 1.00 60.29 O
ATOM 5 O5' A A 88 38.556 159.029 19.604 1.00 60.78 O
ATOM 6 C5' A A 88 39.321 160.231 19.790 1.00 59.14 C
ATOM 7 C4' A A 88 39.150 160.735 21.199 1.00 59.10 C
ATOM 8 O4' A A 88 37.807 161.268 21.378 1.00 59.97 O
ATOM 9 C3' A A 88 39.271 159.674 22.281 1.00 57.67 C
ATOM 10 O3' A A 88 40.620 159.384 22.603 1.00 56.36 O
ATOM 11 C2' A A 88 38.514 160.316 23.431 1.00 58.08 C
ATOM 12 O2' A A 88 39.268 161.316 24.077 1.00 57.93 O
ATOM 13 C1' A A 88 37.343 160.958 22.686 1.00 58.52 C
ATOM 14 N9 A A 88 36.248 160.000 22.562 1.00 58.49 N
ATOM 15 C8 A A 88 35.910 159.247 21.465 1.00 58.37 C
ATOM 16 N7 A A 88 34.910 158.431 21.672 1.00 58.68 N
ATOM 17 C5 A A 88 34.557 158.666 22.992 1.00 60.62 C
ATOM 18 C6 A A 88 33.570 158.103 23.821 1.00 60.72 C
ATOM 19 N6 A A 88 32.739 157.137 23.425 1.00 59.81 N
ATOM 20 N1 A A 88 33.473 158.567 25.088 1.00 60.78 N
ATOM 21 C2 A A 88 34.324 159.522 25.487 1.00 61.47 C
ATOM 22 N3 A A 88 35.303 160.121 24.805 1.00 61.03 N
ATOM 23 C4 A A 88 35.365 159.642 23.549 1.00 60.34 C
ATOM 24 P A A 89 41.049 157.871 22.925 1.00 55.86 P
ATOM 25 OP1 A A 89 42.504 157.880 23.224 1.00 56.38 O
ATOM 26 OP2 A A 89 40.535 156.978 21.855 1.00 56.91 O
ATOM 27 O5' A A 89 40.229 157.525 24.249 1.00 55.58 O
TER

ATOM 1 O3' A B 86 37.931 164.446 13.865 1.00 67.62 O
ATOM 2 P G B 87 37.593 162.877 13.822 1.00 65.40 P
ATOM 3 OP1 G B 87 38.835 162.133 14.160 1.00 65.28 O
ATOM 4 OP2 G B 87 36.909 162.606 12.537 1.00 67.69 O
ATOM 5 O5' G B 87 36.518 162.676 14.979 1.00 67.43 O
ATOM 6 C5' G B 87 36.863 162.871 16.365 1.00 65.21 C
ATOM 7 C4' G B 87 36.290 161.750 17.200 1.00 63.66 C
ATOM 8 O4' G B 87 34.840 161.781 17.103 1.00 62.57 O
ATOM 9 C3' G B 87 36.710 160.351 16.771 1.00 61.51 C
ATOM 10 O3' G B 87 36.771 159.510 17.914 1.00 60.78 O
ATOM 11 C2' G B 87 35.580 159.936 15.835 1.00 61.84 C
ATOM 12 O2' G B 87 35.416 158.537 15.721 1.00 58.74 O
ATOM 13 C1' G B 87 34.369 160.591 16.500 1.00 64.22 C
ATOM 14 N9 G B 87 33.317 160.960 15.554 1.00 68.30 N
ATOM 15 C8 G B 87 33.474 161.633 14.362 1.00 69.39 C
ATOM 16 N7 G B 87 32.349 161.831 13.731 1.00 69.94 N
ATOM 17 C5 G B 87 31.388 161.256 14.551 1.00 70.61 C
ATOM 18 C6 G B 87 29.981 161.162 14.390 1.00 71.91 C
ATOM 19 O6 G B 87 29.275 161.586 13.458 1.00 73.75 O
ATOM 20 N1 G B 87 29.391 160.497 15.460 1.00 71.46 N
ATOM 21 C2 G B 87 30.062 159.990 16.544 1.00 70.26 C
ATOM 22 N2 G B 87 29.309 159.388 17.470 1.00 69.94 N
ATOM 23 N3 G B 87 31.371 160.069 16.707 1.00 70.32 N
ATOM 24 C4 G B 87 31.969 160.711 15.680 1.00 69.84 C
ATOM 25 P A B 88 38.060 158.585 18.158 1.00 59.32 P
ATOM 26 OP1 A B 88 39.111 158.950 17.175 1.00 61.24 O
ATOM 27 OP2 A B 88 37.614 157.176 18.252 1.00 60.29 O
ATOM 28 O5' A B 88 38.556 159.029 19.604 1.00 60.78 O
TER

Atoms:
OP1: (39.111,158.950,17.175)
OP2: (37.614,157.176,18.252)
C3': (39.271,159.674,22.281)
C1': (37.343,160.958,22.686)
C5': (39.321,160.231,19.790)
O4': (37.807,161.268,21.378)
C8: (35.910,159.247,21.465)
O2': (39.268,161.316,24.077)
C6: (33.570,158.103,23.821)
C5: (34.557,158.666,22.992)
C4: (35.365,159.642,23.549)
P: (38.060,158.585,18.158)
C4': (39.150,160.735,21.199)
C2': (38.514,160.316,23.431)
C2: (34.324,159.522,25.487)
N1: (33.473,158.567,25.088)
N3: (35.303,160.121,24.805)
N6: (32.739,157.137,23.425)
N7: (34.910,158.431,21.672)
N9: (36.248,160.000,22.562)
O5': (38.556,159.029,19.604)
O3': (40.620,159.384,22.603)
OP1: (38.835,162.133,14.160)
OP2: (36.909,162.606,12.537)
C3': (36.710,160.351,16.771)
C1': (34.369,160.591,16.500)
C5': (36.863,162.871,16.365)
O6: (29.275,161.586,13.458)
O4': (34.840,161.781,17.103)
C8: (33.474,161.633,14.362)
C2: (30.062,159.990,16.544)
C6: (29.981,161.162,14.390)
C5: (31.388,161.256,14.551)
C4: (31.969,160.711,15.680)
P: (37.593,162.877,13.822)
C4': (36.290,161.750,17.200)
C2': (35.580,159.936,15.835)
O2': (35.416,158.537,15.721)
N1: (29.391,160.497,15.460)
N2: (29.309,159.388,17.470)
N3: (31.371,160.069,16.707)
N7: (32.349,161.831,13.731)
N9: (33.317,160.960,15.554)
O5': (36.518,162.676,14.979)
O3': (36.771,159.510,17.914)
Image (generated by PyMOL):
PyMOL image
show in jmol