ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2D2L:B7:B6

Extra

PDB:
ATOM 1 O3' G A 6 40.594 19.431 57.315 1.00 60.43 O
ATOM 2 P A A 7 40.888 19.963 55.831 1.00 61.13 P
ATOM 3 OP1 A A 7 41.977 20.976 55.870 1.00 62.53 O
ATOM 4 OP2 A A 7 39.560 20.324 55.256 1.00 57.96 O
ATOM 5 O5' A A 7 41.446 18.685 55.067 1.00 56.55 O
ATOM 6 C5' A A 7 42.698 18.113 55.411 1.00 56.71 C
ATOM 7 C4' A A 7 43.040 17.037 54.420 1.00 57.25 C
ATOM 8 O4' A A 7 42.017 16.019 54.476 1.00 54.07 O
ATOM 9 C3' A A 7 43.052 17.490 52.976 1.00 59.17 C
ATOM 10 O3' A A 7 44.344 17.979 52.672 1.00 57.42 O
ATOM 11 C2' A A 7 42.760 16.198 52.229 1.00 57.44 C
ATOM 12 O2' A A 7 43.910 15.389 52.099 1.00 60.67 O
ATOM 13 C1' A A 7 41.763 15.525 53.177 1.00 57.10 C
ATOM 14 N9 A A 7 40.363 15.817 52.895 1.00 57.76 N
ATOM 15 C8 A A 7 39.559 16.679 53.596 1.00 57.18 C
ATOM 16 N7 A A 7 38.326 16.724 53.163 1.00 58.18 N
ATOM 17 C5 A A 7 38.319 15.841 52.095 1.00 58.15 C
ATOM 18 C6 A A 7 37.308 15.437 51.225 1.00 58.16 C
ATOM 19 N6 A A 7 36.057 15.896 51.291 1.00 57.18 N
ATOM 20 N1 A A 7 37.624 14.533 50.274 1.00 58.22 N
ATOM 21 C2 A A 7 38.880 14.077 50.213 1.00 58.93 C
ATOM 22 N3 A A 7 39.922 14.383 50.977 1.00 60.15 N
ATOM 23 C4 A A 7 39.570 15.280 51.912 1.00 58.17 C
ATOM 24 P A A 8 44.505 19.188 51.638 1.00 62.32 P
ATOM 25 OP1 A A 8 45.947 19.523 51.538 1.00 58.22 O
ATOM 26 OP2 A A 8 43.523 20.242 52.012 1.00 53.02 O
ATOM 27 O5' A A 8 44.045 18.548 50.261 1.00 55.83 O
TER

ATOM 1 O3' A B 5 37.214 20.431 62.373 1.00 62.48 O
ATOM 2 P G B 6 37.490 21.359 61.097 1.00 62.06 P
ATOM 3 OP1 G B 6 38.617 22.279 61.404 1.00 61.64 O
ATOM 4 OP2 G B 6 36.178 21.912 60.668 1.00 62.60 O
ATOM 5 O5' G B 6 37.986 20.336 59.989 1.00 62.16 O
ATOM 6 C5' G B 6 39.162 19.570 60.184 1.00 59.36 C
ATOM 7 C4' G B 6 39.270 18.537 59.100 1.00 62.44 C
ATOM 8 O4' G B 6 38.097 17.689 59.151 1.00 64.80 O
ATOM 9 C3' G B 6 39.265 19.095 57.689 1.00 62.52 C
ATOM 10 O3' G B 6 40.594 19.431 57.315 1.00 60.43 O
ATOM 11 C2' G B 6 38.749 17.916 56.879 1.00 61.68 C
ATOM 12 O2' G B 6 39.766 16.963 56.631 1.00 61.64 O
ATOM 13 C1' G B 6 37.719 17.317 57.841 1.00 63.60 C
ATOM 14 N9 G B 6 36.340 17.745 57.633 1.00 61.78 N
ATOM 15 C8 G B 6 35.676 18.755 58.287 1.00 61.35 C
ATOM 16 N7 G B 6 34.429 18.871 57.916 1.00 62.02 N
ATOM 17 C5 G B 6 34.265 17.887 56.952 1.00 60.63 C
ATOM 18 C6 G B 6 33.125 17.531 56.192 1.00 60.84 C
ATOM 19 O6 G B 6 31.991 18.024 56.231 1.00 60.40 O
ATOM 20 N1 G B 6 33.399 16.479 55.318 1.00 59.48 N
ATOM 21 C2 G B 6 34.612 15.846 55.197 1.00 61.31 C
ATOM 22 N2 G B 6 34.679 14.854 54.295 1.00 62.33 N
ATOM 23 N3 G B 6 35.681 16.164 55.907 1.00 61.49 N
ATOM 24 C4 G B 6 35.437 17.188 56.758 1.00 61.18 C
ATOM 25 P A B 7 40.888 19.963 55.831 1.00 61.13 P
ATOM 26 OP1 A B 7 41.977 20.976 55.870 1.00 62.53 O
ATOM 27 OP2 A B 7 39.560 20.324 55.256 1.00 57.96 O
ATOM 28 O5' A B 7 41.446 18.685 55.067 1.00 56.55 O
TER

Atoms:
OP1: (41.977,20.976,55.870)
OP2: (39.560,20.324,55.256)
C3': (43.052,17.490,52.976)
C1': (41.763,15.525,53.177)
C5': (42.698,18.113,55.411)
O4': (42.017,16.019,54.476)
C8: (39.559,16.679,53.596)
O2': (43.910,15.389,52.099)
C6: (37.308,15.437,51.225)
C5: (38.319,15.841,52.095)
C4: (39.570,15.280,51.912)
P: (40.888,19.963,55.831)
C4': (43.040,17.037,54.420)
C2': (42.760,16.198,52.229)
C2: (38.880,14.077,50.213)
N1: (37.624,14.533,50.274)
N3: (39.922,14.383,50.977)
N6: (36.057,15.896,51.291)
N7: (38.326,16.724,53.163)
N9: (40.363,15.817,52.895)
O5': (41.446,18.685,55.067)
O3': (44.344,17.979,52.672)
OP1: (38.617,22.279,61.404)
OP2: (36.178,21.912,60.668)
C3': (39.265,19.095,57.689)
C1': (37.719,17.317,57.841)
C5': (39.162,19.570,60.184)
O6: (31.991,18.024,56.231)
O4': (38.097,17.689,59.151)
C8: (35.676,18.755,58.287)
C2: (34.612,15.846,55.197)
C6: (33.125,17.531,56.192)
C5: (34.265,17.887,56.952)
C4: (35.437,17.188,56.758)
P: (37.490,21.359,61.097)
C4': (39.270,18.537,59.100)
C2': (38.749,17.916,56.879)
O2': (39.766,16.963,56.631)
N1: (33.399,16.479,55.318)
N2: (34.679,14.854,54.295)
N3: (35.681,16.164,55.907)
N7: (34.429,18.871,57.916)
N9: (36.340,17.745,57.633)
O5': (37.986,20.336,59.989)
O3': (40.594,19.431,57.315)
Image (generated by PyMOL):
PyMOL image
show in jmol