ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:088:087

Extra

PDB:
ATOM 1 O3' G A 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 2 P A A 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 3 OP1 A A 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 4 OP2 A A 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 5 O5' A A 88 39.503 159.580 19.720 1.00 74.09 O
ATOM 6 C5' A A 88 40.322 160.747 19.903 1.00 71.63 C
ATOM 7 C4' A A 88 40.027 161.382 21.236 1.00 70.91 C
ATOM 8 O4' A A 88 38.645 161.839 21.259 1.00 71.94 O
ATOM 9 C3' A A 88 40.117 160.448 22.429 1.00 70.09 C
ATOM 10 O3' A A 88 41.454 160.257 22.872 1.00 68.40 O
ATOM 11 C2' A A 88 39.241 161.160 23.448 1.00 70.79 C
ATOM 12 O2' A A 88 39.889 162.269 24.038 1.00 71.60 O
ATOM 13 C1' A A 88 38.100 161.655 22.557 1.00 71.04 C
ATOM 14 N9 A A 88 37.029 160.665 22.460 1.00 71.23 N
ATOM 15 C8 A A 88 36.742 159.855 21.391 1.00 71.53 C
ATOM 16 N7 A A 88 35.747 159.031 21.603 1.00 73.26 N
ATOM 17 C5 A A 88 35.339 159.322 22.899 1.00 73.09 C
ATOM 18 C6 A A 88 34.321 158.782 23.723 1.00 72.57 C
ATOM 19 N6 A A 88 33.511 157.785 23.347 1.00 70.93 N
ATOM 20 N1 A A 88 34.173 159.304 24.962 1.00 72.01 N
ATOM 21 C2 A A 88 35.002 160.289 25.345 1.00 72.54 C
ATOM 22 N3 A A 88 36.000 160.871 24.669 1.00 72.65 N
ATOM 23 C4 A A 88 36.116 160.337 23.437 1.00 72.57 C
ATOM 24 P A A 89 41.944 158.784 23.283 1.00 67.76 P
ATOM 25 OP1 A A 89 43.351 158.875 23.747 1.00 68.66 O
ATOM 26 OP2 A A 89 41.604 157.859 22.175 1.00 68.74 O
ATOM 27 O5' A A 89 41.020 158.404 24.527 1.00 68.87 O
TER

ATOM 1 O3' A B 86 38.828 164.834 13.588 1.00 81.93 O
ATOM 2 P G B 87 38.635 163.247 13.731 1.00 81.08 P
ATOM 3 OP1 G B 87 39.935 162.650 14.135 1.00 80.72 O
ATOM 4 OP2 G B 87 37.977 162.787 12.486 1.00 82.50 O
ATOM 5 O5' G B 87 37.582 163.077 14.916 1.00 80.98 O
ATOM 6 C5' G B 87 37.957 163.296 16.290 1.00 79.70 C
ATOM 7 C4' G B 87 37.354 162.227 17.175 1.00 78.05 C
ATOM 8 O4' G B 87 35.905 162.330 17.132 1.00 78.62 O
ATOM 9 C3' G B 87 37.683 160.790 16.790 1.00 77.01 C
ATOM 10 O3' G B 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 11 C2' G B 87 36.488 160.388 15.928 1.00 77.22 C
ATOM 12 O2' G B 87 36.258 158.993 15.891 1.00 73.90 O
ATOM 13 C1' G B 87 35.346 161.127 16.628 1.00 78.81 C
ATOM 14 N9 G B 87 34.253 161.494 15.732 1.00 80.73 N
ATOM 15 C8 G B 87 34.359 162.219 14.570 1.00 81.61 C
ATOM 16 N7 G B 87 33.213 162.420 13.984 1.00 82.64 N
ATOM 17 C5 G B 87 32.290 161.784 14.801 1.00 82.82 C
ATOM 18 C6 G B 87 30.882 161.663 14.671 1.00 84.09 C
ATOM 19 O6 G B 87 30.148 162.101 13.774 1.00 85.78 O
ATOM 20 N1 G B 87 30.332 160.942 15.723 1.00 84.07 N
ATOM 21 C2 G B 87 31.039 160.395 16.760 1.00 83.17 C
ATOM 22 N2 G B 87 30.315 159.724 17.668 1.00 81.79 N
ATOM 23 N3 G B 87 32.356 160.497 16.894 1.00 82.97 N
ATOM 24 C4 G B 87 32.913 161.202 15.884 1.00 81.88 C
ATOM 25 P A B 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 26 OP1 A B 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 27 OP2 A B 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 28 O5' A B 88 39.503 159.580 19.720 1.00 74.09 O
TER

Atoms:
OP1: (40.115,159.507,17.297)
OP2: (38.621,157.706,18.346)
C3': (40.117,160.448,22.429)
C1': (38.100,161.655,22.557)
C5': (40.322,160.747,19.903)
O4': (38.645,161.839,21.259)
C8: (36.742,159.855,21.391)
O2': (39.889,162.269,24.038)
C6: (34.321,158.782,23.723)
C5: (35.339,159.322,22.899)
C4: (36.116,160.337,23.437)
P: (39.052,159.118,18.266)
C4': (40.027,161.382,21.236)
C2': (39.241,161.160,23.448)
C2: (35.002,160.289,25.345)
N1: (34.173,159.304,24.962)
N3: (36.000,160.871,24.669)
N6: (33.511,157.785,23.347)
N7: (35.747,159.031,21.603)
N9: (37.029,160.665,22.460)
O5': (39.503,159.580,19.720)
O3': (41.454,160.257,22.872)
OP1: (39.935,162.650,14.135)
OP2: (37.977,162.787,12.486)
C3': (37.683,160.790,16.790)
C1': (35.346,161.127,16.628)
C5': (37.957,163.296,16.290)
O6: (30.148,162.101,13.774)
O4': (35.905,162.330,17.132)
C8: (34.359,162.219,14.570)
C2: (31.039,160.395,16.760)
C6: (30.882,161.663,14.671)
C5: (32.290,161.784,14.801)
C4: (32.913,161.202,15.884)
P: (38.635,163.247,13.731)
C4': (37.354,162.227,17.175)
C2': (36.488,160.388,15.928)
O2': (36.258,158.993,15.891)
N1: (30.332,160.942,15.723)
N2: (30.315,159.724,17.668)
N3: (32.356,160.497,16.894)
N7: (33.213,162.420,13.984)
N9: (34.253,161.494,15.732)
O5': (37.582,163.077,14.916)
O3': (37.747,160.005,17.970)
Image (generated by PyMOL):
PyMOL image
show in jmol