Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0507:0506
Extra
PDB:
ATOM 1 O3' G A 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 2 P A A 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 3 OP1 A A 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 4 OP2 A A 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 5 O5' A A 507 25.209 139.096 71.866 1.00 34.86 O
ATOM 6 C5' A A 507 24.271 138.051 71.567 1.00 34.98 C
ATOM 7 C4' A A 507 24.887 136.713 71.875 1.00 35.31 C
ATOM 8 O4' A A 507 25.826 136.352 70.836 1.00 35.04 O
ATOM 9 C3' A A 507 25.690 136.718 73.159 1.00 35.41 C
ATOM 10 O3' A A 507 24.863 136.448 74.274 1.00 34.86 O
ATOM 11 C2' A A 507 26.742 135.655 72.907 1.00 35.43 C
ATOM 12 O2' A A 507 26.232 134.358 73.105 1.00 38.17 O
ATOM 13 C1' A A 507 27.020 135.869 71.419 1.00 35.22 C
ATOM 14 N9 A A 507 28.069 136.843 71.125 1.00 34.81 N
ATOM 15 C8 A A 507 27.908 138.064 70.525 1.00 35.32 C
ATOM 16 N7 A A 507 29.024 138.711 70.335 1.00 36.78 N
ATOM 17 C5 A A 507 29.990 137.865 70.857 1.00 36.88 C
ATOM 18 C6 A A 507 31.381 137.968 70.939 1.00 37.29 C
ATOM 19 N6 A A 507 32.071 139.009 70.469 1.00 37.47 N
ATOM 20 N1 A A 507 32.051 136.951 71.516 1.00 37.84 N
ATOM 21 C2 A A 507 31.357 135.903 71.967 1.00 36.70 C
ATOM 22 N3 A A 507 30.050 135.687 71.939 1.00 35.95 N
ATOM 23 C4 A A 507 29.414 136.717 71.361 1.00 35.92 C
ATOM 24 P A A 508 25.217 137.101 75.690 1.00 35.63 P
ATOM 25 OP1 A A 508 24.137 136.714 76.630 1.00 33.78 O
ATOM 26 OP2 A A 508 25.527 138.541 75.474 1.00 33.67 O
ATOM 27 O5' A A 508 26.557 136.349 76.100 1.00 34.34 O
TER
ATOM 1 O3' U B 505 21.189 141.238 64.706 1.00 33.78 O
ATOM 2 P G B 506 20.920 141.922 66.130 1.00 37.91 P
ATOM 3 OP1 G B 506 19.825 141.145 66.764 1.00 36.10 O
ATOM 4 OP2 G B 506 20.778 143.392 65.947 1.00 34.83 O
ATOM 5 O5' G B 506 22.249 141.651 66.956 1.00 37.68 O
ATOM 6 C5' G B 506 22.767 140.324 67.080 1.00 37.36 C
ATOM 7 C4' G B 506 24.167 140.361 67.632 1.00 36.84 C
ATOM 8 O4' G B 506 25.070 140.964 66.652 1.00 37.31 O
ATOM 9 C3' G B 506 24.330 141.183 68.910 1.00 35.35 C
ATOM 10 O3' G B 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 11 C2' G B 506 25.012 142.448 68.403 1.00 33.66 C
ATOM 12 O2' G B 506 25.766 143.125 69.382 1.00 31.96 O
ATOM 13 C1' G B 506 25.914 141.857 67.327 1.00 34.85 C
ATOM 14 N9 G B 506 26.502 142.817 66.399 1.00 34.82 N
ATOM 15 C8 G B 506 25.942 143.979 65.920 1.00 35.60 C
ATOM 16 N7 G B 506 26.789 144.721 65.259 1.00 34.99 N
ATOM 17 C5 G B 506 27.966 143.985 65.269 1.00 36.57 C
ATOM 18 C6 G B 506 29.246 144.292 64.745 1.00 36.83 C
ATOM 19 O6 G B 506 29.614 145.321 64.169 1.00 39.92 O
ATOM 20 N1 G B 506 30.150 143.256 64.961 1.00 36.26 N
ATOM 21 C2 G B 506 29.861 142.078 65.604 1.00 36.56 C
ATOM 22 N2 G B 506 30.861 141.193 65.705 1.00 34.12 N
ATOM 23 N3 G B 506 28.676 141.788 66.113 1.00 36.90 N
ATOM 24 C4 G B 506 27.785 142.782 65.918 1.00 36.07 C
ATOM 25 P A B 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 26 OP1 A B 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 27 OP2 A B 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 28 O5' A B 507 25.209 139.096 71.866 1.00 34.86 O
TER
ATOM 2 P A A 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 3 OP1 A A 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 4 OP2 A A 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 5 O5' A A 507 25.209 139.096 71.866 1.00 34.86 O
ATOM 6 C5' A A 507 24.271 138.051 71.567 1.00 34.98 C
ATOM 7 C4' A A 507 24.887 136.713 71.875 1.00 35.31 C
ATOM 8 O4' A A 507 25.826 136.352 70.836 1.00 35.04 O
ATOM 9 C3' A A 507 25.690 136.718 73.159 1.00 35.41 C
ATOM 10 O3' A A 507 24.863 136.448 74.274 1.00 34.86 O
ATOM 11 C2' A A 507 26.742 135.655 72.907 1.00 35.43 C
ATOM 12 O2' A A 507 26.232 134.358 73.105 1.00 38.17 O
ATOM 13 C1' A A 507 27.020 135.869 71.419 1.00 35.22 C
ATOM 14 N9 A A 507 28.069 136.843 71.125 1.00 34.81 N
ATOM 15 C8 A A 507 27.908 138.064 70.525 1.00 35.32 C
ATOM 16 N7 A A 507 29.024 138.711 70.335 1.00 36.78 N
ATOM 17 C5 A A 507 29.990 137.865 70.857 1.00 36.88 C
ATOM 18 C6 A A 507 31.381 137.968 70.939 1.00 37.29 C
ATOM 19 N6 A A 507 32.071 139.009 70.469 1.00 37.47 N
ATOM 20 N1 A A 507 32.051 136.951 71.516 1.00 37.84 N
ATOM 21 C2 A A 507 31.357 135.903 71.967 1.00 36.70 C
ATOM 22 N3 A A 507 30.050 135.687 71.939 1.00 35.95 N
ATOM 23 C4 A A 507 29.414 136.717 71.361 1.00 35.92 C
ATOM 24 P A A 508 25.217 137.101 75.690 1.00 35.63 P
ATOM 25 OP1 A A 508 24.137 136.714 76.630 1.00 33.78 O
ATOM 26 OP2 A A 508 25.527 138.541 75.474 1.00 33.67 O
ATOM 27 O5' A A 508 26.557 136.349 76.100 1.00 34.34 O
TER
ATOM 1 O3' U B 505 21.189 141.238 64.706 1.00 33.78 O
ATOM 2 P G B 506 20.920 141.922 66.130 1.00 37.91 P
ATOM 3 OP1 G B 506 19.825 141.145 66.764 1.00 36.10 O
ATOM 4 OP2 G B 506 20.778 143.392 65.947 1.00 34.83 O
ATOM 5 O5' G B 506 22.249 141.651 66.956 1.00 37.68 O
ATOM 6 C5' G B 506 22.767 140.324 67.080 1.00 37.36 C
ATOM 7 C4' G B 506 24.167 140.361 67.632 1.00 36.84 C
ATOM 8 O4' G B 506 25.070 140.964 66.652 1.00 37.31 O
ATOM 9 C3' G B 506 24.330 141.183 68.910 1.00 35.35 C
ATOM 10 O3' G B 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 11 C2' G B 506 25.012 142.448 68.403 1.00 33.66 C
ATOM 12 O2' G B 506 25.766 143.125 69.382 1.00 31.96 O
ATOM 13 C1' G B 506 25.914 141.857 67.327 1.00 34.85 C
ATOM 14 N9 G B 506 26.502 142.817 66.399 1.00 34.82 N
ATOM 15 C8 G B 506 25.942 143.979 65.920 1.00 35.60 C
ATOM 16 N7 G B 506 26.789 144.721 65.259 1.00 34.99 N
ATOM 17 C5 G B 506 27.966 143.985 65.269 1.00 36.57 C
ATOM 18 C6 G B 506 29.246 144.292 64.745 1.00 36.83 C
ATOM 19 O6 G B 506 29.614 145.321 64.169 1.00 39.92 O
ATOM 20 N1 G B 506 30.150 143.256 64.961 1.00 36.26 N
ATOM 21 C2 G B 506 29.861 142.078 65.604 1.00 36.56 C
ATOM 22 N2 G B 506 30.861 141.193 65.705 1.00 34.12 N
ATOM 23 N3 G B 506 28.676 141.788 66.113 1.00 36.90 N
ATOM 24 C4 G B 506 27.785 142.782 65.918 1.00 36.07 C
ATOM 25 P A B 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 26 OP1 A B 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 27 OP2 A B 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 28 O5' A B 507 25.209 139.096 71.866 1.00 34.86 O
TER
Atoms:
OP1: (23.523,140.885,71.630)
OP2: (25.998,141.467,71.961)
C3': (25.690,136.718,73.159)
C1': (27.020,135.869,71.419)
C5': (24.271,138.051,71.567)
O4': (25.826,136.352,70.836)
C8: (27.908,138.064,70.525)
O2': (26.232,134.358,73.105)
C6: (31.381,137.968,70.939)
C5: (29.990,137.865,70.857)
C4: (29.414,136.717,71.361)
P: (24.955,140.585,71.382)
C4': (24.887,136.713,71.875)
C2': (26.742,135.655,72.907)
C2: (31.357,135.903,71.967)
N1: (32.051,136.951,71.516)
N3: (30.050,135.687,71.939)
N6: (32.071,139.009,70.469)
N7: (29.024,138.711,70.335)
N9: (28.069,136.843,71.125)
O5': (25.209,139.096,71.866)
O3': (24.863,136.448,74.274)
OP2: (25.998,141.467,71.961)
C3': (25.690,136.718,73.159)
C1': (27.020,135.869,71.419)
C5': (24.271,138.051,71.567)
O4': (25.826,136.352,70.836)
C8: (27.908,138.064,70.525)
O2': (26.232,134.358,73.105)
C6: (31.381,137.968,70.939)
C5: (29.990,137.865,70.857)
C4: (29.414,136.717,71.361)
P: (24.955,140.585,71.382)
C4': (24.887,136.713,71.875)
C2': (26.742,135.655,72.907)
C2: (31.357,135.903,71.967)
N1: (32.051,136.951,71.516)
N3: (30.050,135.687,71.939)
N6: (32.071,139.009,70.469)
N7: (29.024,138.711,70.335)
N9: (28.069,136.843,71.125)
O5': (25.209,139.096,71.866)
O3': (24.863,136.448,74.274)
OP1: (19.825,141.145,66.764)
OP2: (20.778,143.392,65.947)
C3': (24.330,141.183,68.910)
C1': (25.914,141.857,67.327)
C5': (22.767,140.324,67.080)
O6: (29.614,145.321,64.169)
O4': (25.070,140.964,66.652)
C8: (25.942,143.979,65.920)
C2: (29.861,142.078,65.604)
C6: (29.246,144.292,64.745)
C5: (27.966,143.985,65.269)
C4: (27.785,142.782,65.918)
P: (20.920,141.922,66.130)
C4': (24.167,140.361,67.632)
C2': (25.012,142.448,68.403)
O2': (25.766,143.125,69.382)
N1: (30.150,143.256,64.961)
N2: (30.861,141.193,65.705)
N3: (28.676,141.788,66.113)
N7: (26.789,144.721,65.259)
N9: (26.502,142.817,66.399)
O5': (22.249,141.651,66.956)
O3': (25.205,140.500,69.799)
OP2: (20.778,143.392,65.947)
C3': (24.330,141.183,68.910)
C1': (25.914,141.857,67.327)
C5': (22.767,140.324,67.080)
O6: (29.614,145.321,64.169)
O4': (25.070,140.964,66.652)
C8: (25.942,143.979,65.920)
C2: (29.861,142.078,65.604)
C6: (29.246,144.292,64.745)
C5: (27.966,143.985,65.269)
C4: (27.785,142.782,65.918)
P: (20.920,141.922,66.130)
C4': (24.167,140.361,67.632)
C2': (25.012,142.448,68.403)
O2': (25.766,143.125,69.382)
N1: (30.150,143.256,64.961)
N2: (30.861,141.193,65.705)
N3: (28.676,141.788,66.113)
N7: (26.789,144.721,65.259)
N9: (26.502,142.817,66.399)
O5': (22.249,141.651,66.956)
O3': (25.205,140.500,69.799)
Image (generated by PyMOL):