Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0583:0582
Extra
PDB:
ATOM 1 O3' C A 582 -1.061 107.314 91.439 1.00 39.36 O
ATOM 2 P U A 583 -2.187 108.381 91.024 1.00 40.11 P
ATOM 3 OP1 U A 583 -1.587 109.257 89.981 1.00 41.19 O
ATOM 4 OP2 U A 583 -2.768 108.994 92.237 1.00 36.73 O
ATOM 5 O5' U A 583 -3.312 107.488 90.336 1.00 41.16 O
ATOM 6 C5' U A 583 -3.047 106.764 89.125 1.00 41.75 C
ATOM 7 C4' U A 583 -4.266 105.971 88.718 1.00 43.63 C
ATOM 8 O4' U A 583 -4.483 104.878 89.654 1.00 43.93 O
ATOM 9 C3' U A 583 -5.577 106.737 88.758 1.00 43.37 C
ATOM 10 O3' U A 583 -5.793 107.568 87.637 1.00 43.20 O
ATOM 11 C2' U A 583 -6.592 105.617 88.866 1.00 43.48 C
ATOM 12 O2' U A 583 -6.802 104.960 87.634 1.00 43.15 O
ATOM 13 C1' U A 583 -5.880 104.691 89.852 1.00 44.75 C
ATOM 14 N1 U A 583 -6.204 105.052 91.244 1.00 45.23 N
ATOM 15 C2 U A 583 -7.378 104.557 91.788 1.00 44.99 C
ATOM 16 O2 U A 583 -8.144 103.838 91.171 1.00 45.70 O
ATOM 17 N3 U A 583 -7.623 104.939 93.084 1.00 45.80 N
ATOM 18 C4 U A 583 -6.834 105.751 93.875 1.00 47.49 C
ATOM 19 O4 U A 583 -7.181 105.998 95.029 1.00 47.09 O
ATOM 20 C5 U A 583 -5.642 106.223 93.241 1.00 47.13 C
ATOM 21 C6 U A 583 -5.373 105.864 91.984 1.00 46.18 C
ATOM 22 P C A 584 -6.685 108.887 87.809 1.00 43.92 P
ATOM 23 OP1 C A 584 -6.496 109.712 86.594 1.00 46.42 O
ATOM 24 OP2 C A 584 -6.414 109.482 89.141 1.00 43.46 O
ATOM 25 O5' C A 584 -8.176 108.329 87.813 1.00 46.81 O
TER
ATOM 1 O3' A B 581 0.138 106.606 97.520 1.00 44.58 O
ATOM 2 P C B 582 -0.925 107.476 96.691 1.00 44.18 P
ATOM 3 OP1 C B 582 -0.330 108.824 96.505 1.00 43.55 O
ATOM 4 OP2 C B 582 -2.243 107.350 97.348 1.00 46.37 O
ATOM 5 O5' C B 582 -1.016 106.741 95.280 1.00 42.10 O
ATOM 6 C5' C B 582 0.112 106.702 94.402 1.00 39.46 C
ATOM 7 C4' C B 582 -0.189 105.856 93.189 1.00 40.96 C
ATOM 8 O4' C B 582 -0.511 104.506 93.608 1.00 40.32 O
ATOM 9 C3' C B 582 -1.380 106.262 92.335 1.00 39.81 C
ATOM 10 O3' C B 582 -1.061 107.314 91.439 1.00 39.36 O
ATOM 11 C2' C B 582 -1.669 104.968 91.591 1.00 41.72 C
ATOM 12 O2' C B 582 -0.750 104.727 90.543 1.00 38.04 O
ATOM 13 C1' C B 582 -1.448 103.939 92.702 1.00 42.32 C
ATOM 14 N1 C B 582 -2.697 103.649 93.436 1.00 44.98 N
ATOM 15 C2 C B 582 -3.575 102.664 92.936 1.00 45.34 C
ATOM 16 O2 C B 582 -3.261 102.030 91.912 1.00 43.90 O
ATOM 17 N3 C B 582 -4.743 102.433 93.586 1.00 45.81 N
ATOM 18 C4 C B 582 -5.045 103.134 94.685 1.00 46.17 C
ATOM 19 N4 C B 582 -6.220 102.905 95.272 1.00 45.60 N
ATOM 20 C5 C B 582 -4.159 104.113 95.226 1.00 44.81 C
ATOM 21 C6 C B 582 -3.012 104.336 94.579 1.00 44.44 C
ATOM 22 P U B 583 -2.187 108.381 91.024 1.00 40.11 P
ATOM 23 OP1 U B 583 -1.587 109.257 89.981 1.00 41.19 O
ATOM 24 OP2 U B 583 -2.768 108.994 92.237 1.00 36.73 O
ATOM 25 O5' U B 583 -3.312 107.488 90.336 1.00 41.16 O
TER
ATOM 2 P U A 583 -2.187 108.381 91.024 1.00 40.11 P
ATOM 3 OP1 U A 583 -1.587 109.257 89.981 1.00 41.19 O
ATOM 4 OP2 U A 583 -2.768 108.994 92.237 1.00 36.73 O
ATOM 5 O5' U A 583 -3.312 107.488 90.336 1.00 41.16 O
ATOM 6 C5' U A 583 -3.047 106.764 89.125 1.00 41.75 C
ATOM 7 C4' U A 583 -4.266 105.971 88.718 1.00 43.63 C
ATOM 8 O4' U A 583 -4.483 104.878 89.654 1.00 43.93 O
ATOM 9 C3' U A 583 -5.577 106.737 88.758 1.00 43.37 C
ATOM 10 O3' U A 583 -5.793 107.568 87.637 1.00 43.20 O
ATOM 11 C2' U A 583 -6.592 105.617 88.866 1.00 43.48 C
ATOM 12 O2' U A 583 -6.802 104.960 87.634 1.00 43.15 O
ATOM 13 C1' U A 583 -5.880 104.691 89.852 1.00 44.75 C
ATOM 14 N1 U A 583 -6.204 105.052 91.244 1.00 45.23 N
ATOM 15 C2 U A 583 -7.378 104.557 91.788 1.00 44.99 C
ATOM 16 O2 U A 583 -8.144 103.838 91.171 1.00 45.70 O
ATOM 17 N3 U A 583 -7.623 104.939 93.084 1.00 45.80 N
ATOM 18 C4 U A 583 -6.834 105.751 93.875 1.00 47.49 C
ATOM 19 O4 U A 583 -7.181 105.998 95.029 1.00 47.09 O
ATOM 20 C5 U A 583 -5.642 106.223 93.241 1.00 47.13 C
ATOM 21 C6 U A 583 -5.373 105.864 91.984 1.00 46.18 C
ATOM 22 P C A 584 -6.685 108.887 87.809 1.00 43.92 P
ATOM 23 OP1 C A 584 -6.496 109.712 86.594 1.00 46.42 O
ATOM 24 OP2 C A 584 -6.414 109.482 89.141 1.00 43.46 O
ATOM 25 O5' C A 584 -8.176 108.329 87.813 1.00 46.81 O
TER
ATOM 1 O3' A B 581 0.138 106.606 97.520 1.00 44.58 O
ATOM 2 P C B 582 -0.925 107.476 96.691 1.00 44.18 P
ATOM 3 OP1 C B 582 -0.330 108.824 96.505 1.00 43.55 O
ATOM 4 OP2 C B 582 -2.243 107.350 97.348 1.00 46.37 O
ATOM 5 O5' C B 582 -1.016 106.741 95.280 1.00 42.10 O
ATOM 6 C5' C B 582 0.112 106.702 94.402 1.00 39.46 C
ATOM 7 C4' C B 582 -0.189 105.856 93.189 1.00 40.96 C
ATOM 8 O4' C B 582 -0.511 104.506 93.608 1.00 40.32 O
ATOM 9 C3' C B 582 -1.380 106.262 92.335 1.00 39.81 C
ATOM 10 O3' C B 582 -1.061 107.314 91.439 1.00 39.36 O
ATOM 11 C2' C B 582 -1.669 104.968 91.591 1.00 41.72 C
ATOM 12 O2' C B 582 -0.750 104.727 90.543 1.00 38.04 O
ATOM 13 C1' C B 582 -1.448 103.939 92.702 1.00 42.32 C
ATOM 14 N1 C B 582 -2.697 103.649 93.436 1.00 44.98 N
ATOM 15 C2 C B 582 -3.575 102.664 92.936 1.00 45.34 C
ATOM 16 O2 C B 582 -3.261 102.030 91.912 1.00 43.90 O
ATOM 17 N3 C B 582 -4.743 102.433 93.586 1.00 45.81 N
ATOM 18 C4 C B 582 -5.045 103.134 94.685 1.00 46.17 C
ATOM 19 N4 C B 582 -6.220 102.905 95.272 1.00 45.60 N
ATOM 20 C5 C B 582 -4.159 104.113 95.226 1.00 44.81 C
ATOM 21 C6 C B 582 -3.012 104.336 94.579 1.00 44.44 C
ATOM 22 P U B 583 -2.187 108.381 91.024 1.00 40.11 P
ATOM 23 OP1 U B 583 -1.587 109.257 89.981 1.00 41.19 O
ATOM 24 OP2 U B 583 -2.768 108.994 92.237 1.00 36.73 O
ATOM 25 O5' U B 583 -3.312 107.488 90.336 1.00 41.16 O
TER
Atoms:
C4: (-6.834,105.751,93.875)
N3: (-7.623,104.939,93.084)
OP1: (-1.587,109.257,89.981)
OP2: (-2.768,108.994,92.237)
C2: (-7.378,104.557,91.788)
C1': (-5.880,104.691,89.852)
C3': (-5.577,106.737,88.758)
O5': (-3.312,107.488,90.336)
O4': (-4.483,104.878,89.654)
C5': (-3.047,106.764,89.125)
P: (-2.187,108.381,91.024)
C4': (-4.266,105.971,88.718)
C2': (-6.592,105.617,88.866)
O2': (-6.802,104.960,87.634)
N1: (-6.204,105.052,91.244)
O4: (-7.181,105.998,95.029)
O2: (-8.144,103.838,91.171)
C6: (-5.373,105.864,91.984)
C5: (-5.642,106.223,93.241)
O3': (-5.793,107.568,87.637)
N3: (-7.623,104.939,93.084)
OP1: (-1.587,109.257,89.981)
OP2: (-2.768,108.994,92.237)
C2: (-7.378,104.557,91.788)
C1': (-5.880,104.691,89.852)
C3': (-5.577,106.737,88.758)
O5': (-3.312,107.488,90.336)
O4': (-4.483,104.878,89.654)
C5': (-3.047,106.764,89.125)
P: (-2.187,108.381,91.024)
C4': (-4.266,105.971,88.718)
C2': (-6.592,105.617,88.866)
O2': (-6.802,104.960,87.634)
N1: (-6.204,105.052,91.244)
O4: (-7.181,105.998,95.029)
O2: (-8.144,103.838,91.171)
C6: (-5.373,105.864,91.984)
C5: (-5.642,106.223,93.241)
O3': (-5.793,107.568,87.637)
C2: (-3.575,102.664,92.936)
OP1: (-0.330,108.824,96.505)
OP2: (-2.243,107.350,97.348)
C4: (-5.045,103.134,94.685)
O5': (-1.016,106.741,95.280)
C3': (-1.380,106.262,92.335)
C1': (-1.448,103.939,92.702)
O4': (-0.511,104.506,93.608)
C5': (0.112,106.702,94.402)
P: (-0.925,107.476,96.691)
O2: (-3.261,102.030,91.912)
C4': (-0.189,105.856,93.189)
C2': (-1.669,104.968,91.591)
O2': (-0.750,104.727,90.543)
N1: (-2.697,103.649,93.436)
N3: (-4.743,102.433,93.586)
N4: (-6.220,102.905,95.272)
C6: (-3.012,104.336,94.579)
C5: (-4.159,104.113,95.226)
O3': (-1.061,107.314,91.439)
OP1: (-0.330,108.824,96.505)
OP2: (-2.243,107.350,97.348)
C4: (-5.045,103.134,94.685)
O5': (-1.016,106.741,95.280)
C3': (-1.380,106.262,92.335)
C1': (-1.448,103.939,92.702)
O4': (-0.511,104.506,93.608)
C5': (0.112,106.702,94.402)
P: (-0.925,107.476,96.691)
O2: (-3.261,102.030,91.912)
C4': (-0.189,105.856,93.189)
C2': (-1.669,104.968,91.591)
O2': (-0.750,104.727,90.543)
N1: (-2.697,103.649,93.436)
N3: (-4.743,102.433,93.586)
N4: (-6.220,102.905,95.272)
C6: (-3.012,104.336,94.579)
C5: (-4.159,104.113,95.226)
O3': (-1.061,107.314,91.439)
Image (generated by PyMOL):