ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A957:A956

Extra

PDB:
ATOM 1 O3' G A 956 -114.870 -52.939 5.465 1.00 24.54 O
ATOM 2 P A A 957 -115.727 -51.845 4.677 1.00 18.73 P
ATOM 3 OP1 A A 957 -114.878 -51.316 3.588 1.00 21.57 O
ATOM 4 OP2 A A 957 -116.363 -50.904 5.642 1.00 21.71 O
ATOM 5 O5' A A 957 -116.891 -52.746 4.083 1.00 1.42 O
ATOM 6 C5' A A 957 -117.738 -52.296 3.024 1.00 1.42 C
ATOM 7 C4' A A 957 -118.029 -53.449 2.104 1.00 1.42 C
ATOM 8 O4' A A 957 -116.871 -53.692 1.268 1.00 1.42 O
ATOM 9 C3' A A 957 -118.317 -54.748 2.838 1.00 1.42 C
ATOM 10 O3' A A 957 -119.300 -55.443 2.092 1.00 1.42 O
ATOM 11 C2' A A 957 -116.965 -55.462 2.812 1.00 1.42 C
ATOM 12 O2' A A 957 -117.055 -56.866 2.817 1.00 1.42 O
ATOM 13 C1' A A 957 -116.394 -55.000 1.476 1.00 1.42 C
ATOM 14 N9 A A 957 -114.934 -54.964 1.419 1.00 31.50 N
ATOM 15 C8 A A 957 -114.087 -54.156 2.125 1.00 31.55 C
ATOM 16 N7 A A 957 -112.826 -54.320 1.820 1.00 31.63 N
ATOM 17 C5 A A 957 -112.845 -55.312 0.854 1.00 31.68 C
ATOM 18 C6 A A 957 -111.825 -55.932 0.122 1.00 31.61 C
ATOM 19 N6 A A 957 -110.531 -55.619 0.236 1.00 31.57 N
ATOM 20 N1 A A 957 -112.177 -56.896 -0.751 1.00 31.54 N
ATOM 21 C2 A A 957 -113.466 -57.198 -0.876 1.00 31.55 C
ATOM 22 N3 A A 957 -114.518 -56.680 -0.251 1.00 31.60 N
ATOM 23 C4 A A 957 -114.133 -55.729 0.610 1.00 31.63 C
ATOM 24 P U A 958 -120.811 -55.525 2.640 1.00 4.57 P
ATOM 25 OP1 U A 958 -121.691 -55.681 1.451 1.00 93.98 O
ATOM 26 OP2 U A 958 -121.060 -54.419 3.602 1.00 94.00 O
ATOM 27 O5' U A 958 -120.804 -56.906 3.426 1.00 65.01 O
TER

ATOM 1 O3' C B 955 -117.151 -52.216 11.194 1.00 15.07 O
ATOM 2 P G B 956 -117.788 -51.522 9.897 1.00 2.38 P
ATOM 3 OP1 G B 956 -116.835 -50.493 9.445 1.00 10.37 O
ATOM 4 OP2 G B 956 -119.205 -51.162 10.103 1.00 10.36 O
ATOM 5 O5' G B 956 -117.746 -52.698 8.837 1.00 24.54 O
ATOM 6 C5' G B 956 -117.067 -52.544 7.606 1.00 24.54 C
ATOM 7 C4' G B 956 -115.818 -53.380 7.596 1.00 24.54 C
ATOM 8 O4' G B 956 -115.961 -54.541 8.449 1.00 24.54 O
ATOM 9 C3' G B 956 -115.558 -53.919 6.211 1.00 24.54 C
ATOM 10 O3' G B 956 -114.870 -52.939 5.465 1.00 24.54 O
ATOM 11 C2' G B 956 -114.813 -55.217 6.468 1.00 24.54 C
ATOM 12 O2' G B 956 -113.439 -54.990 6.660 1.00 24.54 O
ATOM 13 C1' G B 956 -115.447 -55.686 7.785 1.00 24.54 C
ATOM 14 N9 G B 956 -116.550 -56.629 7.610 1.00 28.26 N
ATOM 15 C8 G B 956 -117.865 -56.411 7.933 1.00 28.32 C
ATOM 16 N7 G B 956 -118.639 -57.416 7.640 1.00 28.40 N
ATOM 17 C5 G B 956 -117.786 -58.356 7.099 1.00 28.37 C
ATOM 18 C6 G B 956 -118.063 -59.635 6.602 1.00 28.29 C
ATOM 19 O6 G B 956 -119.159 -60.206 6.521 1.00 28.25 O
ATOM 20 N1 G B 956 -116.911 -60.271 6.159 1.00 28.29 N
ATOM 21 C2 G B 956 -115.650 -59.725 6.188 1.00 28.28 C
ATOM 22 N2 G B 956 -114.647 -60.500 5.712 1.00 28.27 N
ATOM 23 N3 G B 956 -115.384 -58.513 6.647 1.00 28.32 N
ATOM 24 C4 G B 956 -116.491 -57.892 7.083 1.00 28.36 C
ATOM 25 P A B 957 -115.727 -51.845 4.677 1.00 18.73 P
ATOM 26 OP1 A B 957 -114.878 -51.316 3.588 1.00 21.57 O
ATOM 27 OP2 A B 957 -116.363 -50.904 5.642 1.00 21.71 O
ATOM 28 O5' A B 957 -116.891 -52.746 4.083 1.00 1.42 O
TER

Atoms:
OP1: (-114.878,-51.316,3.588)
OP2: (-116.363,-50.904,5.642)
C3': (-118.317,-54.748,2.838)
C1': (-116.394,-55.000,1.476)
C5': (-117.738,-52.296,3.024)
O4': (-116.871,-53.692,1.268)
C8: (-114.087,-54.156,2.125)
O2': (-117.055,-56.866,2.817)
C6: (-111.825,-55.932,0.122)
C5: (-112.845,-55.312,0.854)
C4: (-114.133,-55.729,0.610)
P: (-115.727,-51.845,4.677)
C4': (-118.029,-53.449,2.104)
C2': (-116.965,-55.462,2.812)
C2: (-113.466,-57.198,-0.876)
N1: (-112.177,-56.896,-0.751)
N3: (-114.518,-56.680,-0.251)
N6: (-110.531,-55.619,0.236)
N7: (-112.826,-54.320,1.820)
N9: (-114.934,-54.964,1.419)
O5': (-116.891,-52.746,4.083)
O3': (-119.300,-55.443,2.092)
OP1: (-116.835,-50.493,9.445)
OP2: (-119.205,-51.162,10.103)
C3': (-115.558,-53.919,6.211)
C1': (-115.447,-55.686,7.785)
C5': (-117.067,-52.544,7.606)
O6: (-119.159,-60.206,6.521)
O4': (-115.961,-54.541,8.449)
C8: (-117.865,-56.411,7.933)
C2: (-115.650,-59.725,6.188)
C6: (-118.063,-59.635,6.602)
C5: (-117.786,-58.356,7.099)
C4: (-116.491,-57.892,7.083)
P: (-117.788,-51.522,9.897)
C4': (-115.818,-53.380,7.596)
C2': (-114.813,-55.217,6.468)
O2': (-113.439,-54.990,6.660)
N1: (-116.911,-60.271,6.159)
N2: (-114.647,-60.500,5.712)
N3: (-115.384,-58.513,6.647)
N7: (-118.639,-57.416,7.640)
N9: (-116.550,-56.629,7.610)
O5': (-117.746,-52.698,8.837)
O3': (-114.870,-52.939,5.465)
Image (generated by PyMOL):
PyMOL image
show in jmol