Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GM7:G13:G12
Extra
PDB:
ATOM 1 O3' C A 12 -15.274 14.852 -22.754 1.00 22.44 O
ATOM 2 P U A 13 -14.342 15.106 -24.039 1.00 25.85 P
ATOM 3 OP1 U A 13 -15.274 15.493 -25.147 1.00 29.95 O
ATOM 4 OP2 U A 13 -13.588 13.840 -24.118 1.00 28.62 O
ATOM 5 O5' U A 13 -13.497 16.405 -23.655 1.00 25.55 O
ATOM 6 C5' U A 13 -14.239 17.558 -23.223 1.00 22.33 C
ATOM 7 C4' U A 13 -13.320 18.679 -22.822 1.00 22.25 C
ATOM 8 O4' U A 13 -12.765 18.386 -21.522 1.00 19.88 O
ATOM 9 C3' U A 13 -12.102 18.953 -23.703 1.00 22.22 C
ATOM 10 O3' U A 13 -12.499 19.745 -24.820 1.00 28.33 O
ATOM 11 C2' U A 13 -11.226 19.729 -22.703 1.00 17.88 C
ATOM 12 O2' U A 13 -11.744 21.034 -22.407 1.00 21.63 O
ATOM 13 C1' U A 13 -11.418 18.855 -21.463 1.00 19.63 C
ATOM 14 N1 U A 13 -10.534 17.666 -21.449 1.00 20.67 N
ATOM 15 C2 U A 13 -9.228 17.857 -21.030 1.00 22.37 C
ATOM 16 O2 U A 13 -8.758 18.953 -20.734 1.00 21.14 O
ATOM 17 N3 U A 13 -8.468 16.714 -21.024 1.00 22.03 N
ATOM 18 C4 U A 13 -8.870 15.459 -21.415 1.00 21.37 C
ATOM 19 O4 U A 13 -8.072 14.516 -21.341 1.00 29.90 O
ATOM 20 C5 U A 13 -10.230 15.339 -21.867 1.00 18.42 C
ATOM 21 C6 U A 13 -10.998 16.441 -21.876 1.00 15.58 C
ATOM 22 P G A 14 -11.717 19.675 -26.212 1.00 25.68 P
ATOM 23 OP1 G A 14 -12.360 20.586 -27.184 1.00 24.71 O
ATOM 24 OP2 G A 14 -11.519 18.220 -26.444 1.00 23.86 O
ATOM 25 O5' G A 14 -10.303 20.318 -25.814 1.00 24.14 O
TER
ATOM 1 O3' G B 11 -16.897 9.728 -19.716 1.00 26.42 O
ATOM 2 P C B 12 -16.119 9.871 -21.132 1.00 27.74 P
ATOM 3 OP1 C B 12 -17.136 9.913 -22.193 1.00 39.04 O
ATOM 4 OP2 C B 12 -14.725 9.432 -21.363 1.00 41.13 O
ATOM 5 O5' C B 12 -15.524 11.362 -20.969 1.00 27.46 O
ATOM 6 C5' C B 12 -16.454 12.437 -21.083 1.00 23.76 C
ATOM 7 C4' C B 12 -15.853 13.741 -20.681 1.00 20.91 C
ATOM 8 O4' C B 12 -15.298 13.756 -19.347 1.00 18.41 O
ATOM 9 C3' C B 12 -14.750 14.380 -21.521 1.00 18.48 C
ATOM 10 O3' C B 12 -15.274 14.852 -22.754 1.00 22.44 O
ATOM 11 C2' C B 12 -14.400 15.551 -20.588 1.00 15.80 C
ATOM 12 O2' C B 12 -15.468 16.476 -20.559 1.00 18.52 O
ATOM 13 C1' C B 12 -14.340 14.820 -19.228 1.00 14.47 C
ATOM 14 N1 C B 12 -13.001 14.205 -19.041 1.00 17.59 N
ATOM 15 C2 C B 12 -11.927 15.035 -18.719 1.00 18.53 C
ATOM 16 O2 C B 12 -12.124 16.241 -18.584 1.00 21.76 O
ATOM 17 N3 C B 12 -10.661 14.558 -18.535 1.00 20.69 N
ATOM 18 C4 C B 12 -10.473 13.247 -18.663 1.00 24.11 C
ATOM 19 N4 C B 12 -9.218 12.826 -18.490 1.00 31.39 N
ATOM 20 C5 C B 12 -11.561 12.364 -18.961 1.00 22.90 C
ATOM 21 C6 C B 12 -12.794 12.863 -19.172 1.00 17.21 C
ATOM 22 P U B 13 -14.342 15.106 -24.039 1.00 25.85 P
ATOM 23 OP1 U B 13 -15.274 15.493 -25.147 1.00 29.95 O
ATOM 24 OP2 U B 13 -13.588 13.840 -24.118 1.00 28.62 O
ATOM 25 O5' U B 13 -13.497 16.405 -23.655 1.00 25.55 O
TER
ATOM 2 P U A 13 -14.342 15.106 -24.039 1.00 25.85 P
ATOM 3 OP1 U A 13 -15.274 15.493 -25.147 1.00 29.95 O
ATOM 4 OP2 U A 13 -13.588 13.840 -24.118 1.00 28.62 O
ATOM 5 O5' U A 13 -13.497 16.405 -23.655 1.00 25.55 O
ATOM 6 C5' U A 13 -14.239 17.558 -23.223 1.00 22.33 C
ATOM 7 C4' U A 13 -13.320 18.679 -22.822 1.00 22.25 C
ATOM 8 O4' U A 13 -12.765 18.386 -21.522 1.00 19.88 O
ATOM 9 C3' U A 13 -12.102 18.953 -23.703 1.00 22.22 C
ATOM 10 O3' U A 13 -12.499 19.745 -24.820 1.00 28.33 O
ATOM 11 C2' U A 13 -11.226 19.729 -22.703 1.00 17.88 C
ATOM 12 O2' U A 13 -11.744 21.034 -22.407 1.00 21.63 O
ATOM 13 C1' U A 13 -11.418 18.855 -21.463 1.00 19.63 C
ATOM 14 N1 U A 13 -10.534 17.666 -21.449 1.00 20.67 N
ATOM 15 C2 U A 13 -9.228 17.857 -21.030 1.00 22.37 C
ATOM 16 O2 U A 13 -8.758 18.953 -20.734 1.00 21.14 O
ATOM 17 N3 U A 13 -8.468 16.714 -21.024 1.00 22.03 N
ATOM 18 C4 U A 13 -8.870 15.459 -21.415 1.00 21.37 C
ATOM 19 O4 U A 13 -8.072 14.516 -21.341 1.00 29.90 O
ATOM 20 C5 U A 13 -10.230 15.339 -21.867 1.00 18.42 C
ATOM 21 C6 U A 13 -10.998 16.441 -21.876 1.00 15.58 C
ATOM 22 P G A 14 -11.717 19.675 -26.212 1.00 25.68 P
ATOM 23 OP1 G A 14 -12.360 20.586 -27.184 1.00 24.71 O
ATOM 24 OP2 G A 14 -11.519 18.220 -26.444 1.00 23.86 O
ATOM 25 O5' G A 14 -10.303 20.318 -25.814 1.00 24.14 O
TER
ATOM 1 O3' G B 11 -16.897 9.728 -19.716 1.00 26.42 O
ATOM 2 P C B 12 -16.119 9.871 -21.132 1.00 27.74 P
ATOM 3 OP1 C B 12 -17.136 9.913 -22.193 1.00 39.04 O
ATOM 4 OP2 C B 12 -14.725 9.432 -21.363 1.00 41.13 O
ATOM 5 O5' C B 12 -15.524 11.362 -20.969 1.00 27.46 O
ATOM 6 C5' C B 12 -16.454 12.437 -21.083 1.00 23.76 C
ATOM 7 C4' C B 12 -15.853 13.741 -20.681 1.00 20.91 C
ATOM 8 O4' C B 12 -15.298 13.756 -19.347 1.00 18.41 O
ATOM 9 C3' C B 12 -14.750 14.380 -21.521 1.00 18.48 C
ATOM 10 O3' C B 12 -15.274 14.852 -22.754 1.00 22.44 O
ATOM 11 C2' C B 12 -14.400 15.551 -20.588 1.00 15.80 C
ATOM 12 O2' C B 12 -15.468 16.476 -20.559 1.00 18.52 O
ATOM 13 C1' C B 12 -14.340 14.820 -19.228 1.00 14.47 C
ATOM 14 N1 C B 12 -13.001 14.205 -19.041 1.00 17.59 N
ATOM 15 C2 C B 12 -11.927 15.035 -18.719 1.00 18.53 C
ATOM 16 O2 C B 12 -12.124 16.241 -18.584 1.00 21.76 O
ATOM 17 N3 C B 12 -10.661 14.558 -18.535 1.00 20.69 N
ATOM 18 C4 C B 12 -10.473 13.247 -18.663 1.00 24.11 C
ATOM 19 N4 C B 12 -9.218 12.826 -18.490 1.00 31.39 N
ATOM 20 C5 C B 12 -11.561 12.364 -18.961 1.00 22.90 C
ATOM 21 C6 C B 12 -12.794 12.863 -19.172 1.00 17.21 C
ATOM 22 P U B 13 -14.342 15.106 -24.039 1.00 25.85 P
ATOM 23 OP1 U B 13 -15.274 15.493 -25.147 1.00 29.95 O
ATOM 24 OP2 U B 13 -13.588 13.840 -24.118 1.00 28.62 O
ATOM 25 O5' U B 13 -13.497 16.405 -23.655 1.00 25.55 O
TER
Atoms:
C4: (-8.870,15.459,-21.415)
N3: (-8.468,16.714,-21.024)
OP1: (-15.274,15.493,-25.147)
OP2: (-13.588,13.840,-24.118)
C2: (-9.228,17.857,-21.030)
C1': (-11.418,18.855,-21.463)
C3': (-12.102,18.953,-23.703)
O5': (-13.497,16.405,-23.655)
O4': (-12.765,18.386,-21.522)
C5': (-14.239,17.558,-23.223)
P: (-14.342,15.106,-24.039)
C4': (-13.320,18.679,-22.822)
C2': (-11.226,19.729,-22.703)
O2': (-11.744,21.034,-22.407)
N1: (-10.534,17.666,-21.449)
O4: (-8.072,14.516,-21.341)
O2: (-8.758,18.953,-20.734)
C6: (-10.998,16.441,-21.876)
C5: (-10.230,15.339,-21.867)
O3': (-12.499,19.745,-24.820)
N3: (-8.468,16.714,-21.024)
OP1: (-15.274,15.493,-25.147)
OP2: (-13.588,13.840,-24.118)
C2: (-9.228,17.857,-21.030)
C1': (-11.418,18.855,-21.463)
C3': (-12.102,18.953,-23.703)
O5': (-13.497,16.405,-23.655)
O4': (-12.765,18.386,-21.522)
C5': (-14.239,17.558,-23.223)
P: (-14.342,15.106,-24.039)
C4': (-13.320,18.679,-22.822)
C2': (-11.226,19.729,-22.703)
O2': (-11.744,21.034,-22.407)
N1: (-10.534,17.666,-21.449)
O4: (-8.072,14.516,-21.341)
O2: (-8.758,18.953,-20.734)
C6: (-10.998,16.441,-21.876)
C5: (-10.230,15.339,-21.867)
O3': (-12.499,19.745,-24.820)
C2: (-11.927,15.035,-18.719)
OP1: (-17.136,9.913,-22.193)
OP2: (-14.725,9.432,-21.363)
C4: (-10.473,13.247,-18.663)
O5': (-15.524,11.362,-20.969)
C3': (-14.750,14.380,-21.521)
C1': (-14.340,14.820,-19.228)
O4': (-15.298,13.756,-19.347)
C5': (-16.454,12.437,-21.083)
P: (-16.119,9.871,-21.132)
O2: (-12.124,16.241,-18.584)
C4': (-15.853,13.741,-20.681)
C2': (-14.400,15.551,-20.588)
O2': (-15.468,16.476,-20.559)
N1: (-13.001,14.205,-19.041)
N3: (-10.661,14.558,-18.535)
N4: (-9.218,12.826,-18.490)
C6: (-12.794,12.863,-19.172)
C5: (-11.561,12.364,-18.961)
O3': (-15.274,14.852,-22.754)
OP1: (-17.136,9.913,-22.193)
OP2: (-14.725,9.432,-21.363)
C4: (-10.473,13.247,-18.663)
O5': (-15.524,11.362,-20.969)
C3': (-14.750,14.380,-21.521)
C1': (-14.340,14.820,-19.228)
O4': (-15.298,13.756,-19.347)
C5': (-16.454,12.437,-21.083)
P: (-16.119,9.871,-21.132)
O2: (-12.124,16.241,-18.584)
C4': (-15.853,13.741,-20.681)
C2': (-14.400,15.551,-20.588)
O2': (-15.468,16.476,-20.559)
N1: (-13.001,14.205,-19.041)
N3: (-10.661,14.558,-18.535)
N4: (-9.218,12.826,-18.490)
C6: (-12.794,12.863,-19.172)
C5: (-11.561,12.364,-18.961)
O3': (-15.274,14.852,-22.754)
Image (generated by PyMOL):