ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1816:A1814

Extra

PDB:
ATOM 1 O3' A A1815 74.634 -9.018 -21.330 1.00 42.03 O
ATOM 2 P A A1816 74.447 -8.813 -22.900 1.00 44.37 P
ATOM 3 OP1 A A1816 73.765 -7.524 -23.179 1.00 44.87 O
ATOM 4 OP2 A A1816 73.860 -10.085 -23.392 1.00 38.99 O
ATOM 5 O5' A A1816 75.936 -8.745 -23.450 1.00 41.19 O
ATOM 6 C5' A A1816 76.857 -9.790 -23.152 1.00 41.73 C
ATOM 7 C4' A A1816 77.123 -10.623 -24.382 1.00 43.75 C
ATOM 8 O4' A A1816 77.692 -9.791 -25.420 1.00 42.67 O
ATOM 9 C3' A A1816 78.128 -11.748 -24.196 1.00 43.96 C
ATOM 10 O3' A A1816 77.478 -12.940 -23.776 1.00 45.45 O
ATOM 11 C2' A A1816 78.695 -11.951 -25.591 1.00 48.31 C
ATOM 12 O2' A A1816 77.942 -12.846 -26.374 1.00 52.90 O
ATOM 13 C1' A A1816 78.617 -10.545 -26.180 1.00 47.11 C
ATOM 14 N9 A A1816 79.912 -9.864 -26.172 1.00 52.11 N
ATOM 15 C8 A A1816 80.266 -8.663 -25.601 1.00 53.31 C
ATOM 16 N7 A A1816 81.513 -8.327 -25.815 1.00 57.05 N
ATOM 17 C5 A A1816 82.018 -9.379 -26.569 1.00 54.73 C
ATOM 18 C6 A A1816 83.286 -9.623 -27.128 1.00 52.84 C
ATOM 19 N6 A A1816 84.313 -8.788 -27.016 1.00 56.36 N
ATOM 20 N1 A A1816 83.460 -10.767 -27.819 1.00 55.13 N
ATOM 21 C2 A A1816 82.424 -11.609 -27.937 1.00 57.28 C
ATOM 22 N3 A A1816 81.182 -11.489 -27.465 1.00 56.03 N
ATOM 23 C4 A A1816 81.045 -10.336 -26.785 1.00 52.34 C
ATOM 24 P C A1817 78.195 -13.893 -22.705 1.00 42.16 P
ATOM 25 OP1 C A1817 77.342 -15.088 -22.426 1.00 40.02 O
ATOM 26 OP2 C A1817 78.541 -12.946 -21.602 1.00 42.46 O
ATOM 27 O5' C A1817 79.502 -14.396 -23.469 1.00 40.74 O
TER

ATOM 1 O3' U B1813 79.731 -2.053 -25.492 1.00 51.11 O
ATOM 2 P G B1814 80.067 -2.329 -23.931 1.00 58.40 P
ATOM 3 OP1 G B1814 79.000 -1.645 -23.154 1.00 56.24 O
ATOM 4 OP2 G B1814 81.497 -1.979 -23.663 1.00 54.23 O
ATOM 5 O5' G B1814 79.914 -3.916 -23.744 1.00 51.51 O
ATOM 6 C5' G B1814 78.630 -4.579 -23.669 1.00 40.02 C
ATOM 7 C4' G B1814 78.690 -5.704 -22.656 1.00 42.74 C
ATOM 8 O4' G B1814 79.953 -6.372 -22.882 1.00 51.25 O
ATOM 9 C3' G B1814 78.704 -5.226 -21.203 1.00 45.95 C
ATOM 10 O3' G B1814 77.368 -5.405 -20.682 1.00 41.72 O
ATOM 11 C2' G B1814 79.696 -6.157 -20.504 1.00 51.39 C
ATOM 12 O2' G B1814 79.094 -7.300 -19.948 1.00 50.53 O
ATOM 13 C1' G B1814 80.602 -6.602 -21.653 1.00 52.63 C
ATOM 14 N9 G B1814 81.948 -6.046 -21.735 1.00 54.51 N
ATOM 15 C8 G B1814 82.374 -4.754 -21.526 1.00 57.58 C
ATOM 16 N7 G B1814 83.650 -4.591 -21.762 1.00 59.22 N
ATOM 17 C5 G B1814 84.084 -5.853 -22.138 1.00 59.52 C
ATOM 18 C6 G B1814 85.373 -6.313 -22.543 1.00 59.28 C
ATOM 19 O6 G B1814 86.418 -5.671 -22.684 1.00 60.75 O
ATOM 20 N1 G B1814 85.363 -7.676 -22.806 1.00 64.38 N
ATOM 21 C2 G B1814 84.253 -8.489 -22.707 1.00 64.65 C
ATOM 22 N2 G B1814 84.429 -9.784 -22.972 1.00 62.33 N
ATOM 23 N3 G B1814 83.054 -8.069 -22.363 1.00 58.00 N
ATOM 24 C4 G B1814 83.044 -6.759 -22.095 1.00 56.77 C
ATOM 25 P A B1815 76.994 -5.017 -19.143 1.00 43.60 P
ATOM 26 OP1 A B1815 76.098 -3.827 -19.198 1.00 41.55 O
ATOM 27 OP2 A B1815 78.188 -4.983 -18.239 1.00 40.31 O
ATOM 28 O5' A B1815 76.054 -6.221 -18.686 1.00 37.52 O
TER

Atoms:
OP1: (73.765,-7.524,-23.179)
OP2: (73.860,-10.085,-23.392)
C3': (78.128,-11.748,-24.196)
C1': (78.617,-10.545,-26.180)
C5': (76.857,-9.790,-23.152)
O4': (77.692,-9.791,-25.420)
C8: (80.266,-8.663,-25.601)
O2': (77.942,-12.846,-26.374)
C6: (83.286,-9.623,-27.128)
C5: (82.018,-9.379,-26.569)
C4: (81.045,-10.336,-26.785)
P: (74.447,-8.813,-22.900)
C4': (77.123,-10.623,-24.382)
C2': (78.695,-11.951,-25.591)
C2: (82.424,-11.609,-27.937)
N1: (83.460,-10.767,-27.819)
N3: (81.182,-11.489,-27.465)
N6: (84.313,-8.788,-27.016)
N7: (81.513,-8.327,-25.815)
N9: (79.912,-9.864,-26.172)
O5': (75.936,-8.745,-23.450)
O3': (77.478,-12.940,-23.776)
OP1: (79.000,-1.645,-23.154)
OP2: (81.497,-1.979,-23.663)
C3': (78.704,-5.226,-21.203)
C1': (80.602,-6.602,-21.653)
C5': (78.630,-4.579,-23.669)
O6: (86.418,-5.671,-22.684)
O4': (79.953,-6.372,-22.882)
C8: (82.374,-4.754,-21.526)
C2: (84.253,-8.489,-22.707)
C6: (85.373,-6.313,-22.543)
C5: (84.084,-5.853,-22.138)
C4: (83.044,-6.759,-22.095)
P: (80.067,-2.329,-23.931)
C4': (78.690,-5.704,-22.656)
C2': (79.696,-6.157,-20.504)
O2': (79.094,-7.300,-19.948)
N1: (85.363,-7.676,-22.806)
N2: (84.429,-9.784,-22.972)
N3: (83.054,-8.069,-22.363)
N7: (83.650,-4.591,-21.762)
N9: (81.948,-6.046,-21.735)
O5': (79.914,-3.916,-23.744)
O3': (77.368,-5.405,-20.682)
Image (generated by PyMOL):
PyMOL image
show in jmol