ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXE:A80:A79

Extra

PDB:
ATOM 1 O3' G A 79 1.663 -38.374 6.566 1.00 64.21 O
ATOM 2 P A A 80 1.110 -37.594 5.281 1.00 64.96 P
ATOM 3 OP1 A A 80 1.271 -38.480 4.104 1.00 66.15 O
ATOM 4 OP2 A A 80 1.698 -36.235 5.270 1.00 64.47 O
ATOM 5 O5' A A 80 -0.448 -37.442 5.601 1.00 64.99 O
ATOM 6 C5' A A 80 -1.316 -38.567 5.524 1.00 65.30 C
ATOM 7 C4' A A 80 -2.178 -38.637 6.766 1.00 64.62 C
ATOM 8 O4' A A 80 -1.322 -38.748 7.932 1.00 64.01 O
ATOM 9 C3' A A 80 -3.015 -37.400 7.056 1.00 64.37 C
ATOM 10 O3' A A 80 -4.214 -37.393 6.292 1.00 65.53 O
ATOM 11 C2' A A 80 -3.271 -37.599 8.545 1.00 63.36 C
ATOM 12 O2' A A 80 -4.191 -38.639 8.820 1.00 63.12 O
ATOM 13 C1' A A 80 -1.871 -37.999 9.005 1.00 63.20 C
ATOM 14 N9 A A 80 -1.004 -36.858 9.318 1.00 62.89 N
ATOM 15 C8 A A 80 0.103 -36.450 8.624 1.00 63.20 C
ATOM 16 N7 A A 80 0.691 -35.389 9.123 1.00 62.87 N
ATOM 17 C5 A A 80 -0.084 -35.069 10.223 1.00 62.32 C
ATOM 18 C6 A A 80 0.011 -34.039 11.185 1.00 62.06 C
ATOM 19 N6 A A 80 0.974 -33.110 11.175 1.00 61.99 N
ATOM 20 N1 A A 80 -0.922 -33.999 12.165 1.00 61.76 N
ATOM 21 C2 A A 80 -1.883 -34.934 12.173 1.00 61.53 C
ATOM 22 N3 A A 80 -2.073 -35.947 11.325 1.00 61.83 N
ATOM 23 C4 A A 80 -1.133 -35.963 10.362 1.00 62.31 C
ATOM 24 P C A 81 -4.445 -36.354 5.089 1.00 66.77 P
ATOM 25 OP1 C A 81 -5.690 -36.758 4.398 1.00 67.53 O
ATOM 26 OP2 C A 81 -3.186 -36.203 4.326 1.00 66.84 O
ATOM 27 O5' C A 81 -4.711 -34.960 5.816 1.00 66.24 O
TER

ATOM 1 O3' G B 78 6.798 -40.170 3.601 1.00 66.49 O
ATOM 2 P G B 79 5.727 -39.019 3.311 1.00 66.45 P
ATOM 3 OP1 G B 79 4.795 -39.524 2.270 1.00 67.14 O
ATOM 4 OP2 G B 79 6.472 -37.751 3.113 1.00 65.65 O
ATOM 5 O5' G B 79 4.946 -38.885 4.700 1.00 65.37 O
ATOM 6 C5' G B 79 4.107 -39.929 5.180 1.00 65.33 C
ATOM 7 C4' G B 79 3.730 -39.658 6.622 1.00 64.22 C
ATOM 8 O4' G B 79 4.932 -39.595 7.430 1.00 63.56 O
ATOM 9 C3' G B 79 3.052 -38.319 6.868 1.00 63.79 C
ATOM 10 O3' G B 79 1.663 -38.374 6.566 1.00 64.21 O
ATOM 11 C2' G B 79 3.342 -38.114 8.350 1.00 62.81 C
ATOM 12 O2' G B 79 2.527 -38.910 9.189 1.00 62.47 O
ATOM 13 C1' G B 79 4.789 -38.592 8.419 1.00 62.91 C
ATOM 14 N9 G B 79 5.753 -37.518 8.176 1.00 63.10 N
ATOM 15 C8 G B 79 6.300 -37.140 6.971 1.00 63.96 C
ATOM 16 N7 G B 79 7.132 -36.139 7.057 1.00 63.74 N
ATOM 17 C5 G B 79 7.136 -35.827 8.408 1.00 62.79 C
ATOM 18 C6 G B 79 7.853 -34.824 9.101 1.00 62.50 C
ATOM 19 O6 G B 79 8.646 -33.997 8.631 1.00 63.34 O
ATOM 20 N1 G B 79 7.580 -34.835 10.469 1.00 61.83 N
ATOM 21 C2 G B 79 6.717 -35.715 11.087 1.00 61.46 C
ATOM 22 N2 G B 79 6.580 -35.576 12.413 1.00 61.06 N
ATOM 23 N3 G B 79 6.038 -36.663 10.449 1.00 61.66 N
ATOM 24 C4 G B 79 6.294 -36.663 9.113 1.00 62.54 C
ATOM 25 P A B 80 1.110 -37.594 5.281 1.00 64.96 P
ATOM 26 OP1 A B 80 1.271 -38.480 4.104 1.00 66.15 O
ATOM 27 OP2 A B 80 1.698 -36.235 5.270 1.00 64.47 O
ATOM 28 O5' A B 80 -0.448 -37.442 5.601 1.00 64.99 O
TER

Atoms:
OP1: (1.271,-38.480,4.104)
OP2: (1.698,-36.235,5.270)
C3': (-3.015,-37.400,7.056)
C1': (-1.871,-37.999,9.005)
C5': (-1.316,-38.567,5.524)
O4': (-1.322,-38.748,7.932)
C8: (0.103,-36.450,8.624)
O2': (-4.191,-38.639,8.820)
C6: (0.011,-34.039,11.185)
C5: (-0.084,-35.069,10.223)
C4: (-1.133,-35.963,10.362)
P: (1.110,-37.594,5.281)
C4': (-2.178,-38.637,6.766)
C2': (-3.271,-37.599,8.545)
C2: (-1.883,-34.934,12.173)
N1: (-0.922,-33.999,12.165)
N3: (-2.073,-35.947,11.325)
N6: (0.974,-33.110,11.175)
N7: (0.691,-35.389,9.123)
N9: (-1.004,-36.858,9.318)
O5': (-0.448,-37.442,5.601)
O3': (-4.214,-37.393,6.292)
OP1: (4.795,-39.524,2.270)
OP2: (6.472,-37.751,3.113)
C3': (3.052,-38.319,6.868)
C1': (4.789,-38.592,8.419)
C5': (4.107,-39.929,5.180)
O6: (8.646,-33.997,8.631)
O4': (4.932,-39.595,7.430)
C8: (6.300,-37.140,6.971)
C2: (6.717,-35.715,11.087)
C6: (7.853,-34.824,9.101)
C5: (7.136,-35.827,8.408)
C4: (6.294,-36.663,9.113)
P: (5.727,-39.019,3.311)
C4': (3.730,-39.658,6.622)
C2': (3.342,-38.114,8.350)
O2': (2.527,-38.910,9.189)
N1: (7.580,-34.835,10.469)
N2: (6.580,-35.576,12.413)
N3: (6.038,-36.663,10.449)
N7: (7.132,-36.139,7.057)
N9: (5.753,-37.518,8.176)
O5': (4.946,-38.885,4.700)
O3': (1.663,-38.374,6.566)
Image (generated by PyMOL):
PyMOL image
show in jmol