Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01120:01119
Extra
PDB:
ATOM 1 O3' G A1119 59.079 82.535 186.077 1.00110.72 O
ATOM 2 P A A1120 60.434 83.042 186.797 1.00111.82 P
ATOM 3 OP1 A A1120 60.396 84.523 186.867 1.00112.23 O
ATOM 4 OP2 A A1120 61.580 82.369 186.129 1.00112.16 O
ATOM 5 O5' A A1120 60.343 82.473 188.284 1.00113.06 O
ATOM 6 C5' A A1120 59.695 83.220 189.329 1.00115.62 C
ATOM 7 C4' A A1120 59.293 82.306 190.462 1.00118.12 C
ATOM 8 O4' A A1120 58.367 81.288 189.984 1.00119.10 O
ATOM 9 C3' A A1120 60.423 81.500 191.069 1.00119.75 C
ATOM 10 O3' A A1120 61.199 82.271 191.967 1.00122.58 O
ATOM 11 C2' A A1120 59.668 80.347 191.712 1.00119.67 C
ATOM 12 O2' A A1120 58.980 80.722 192.892 1.00119.57 O
ATOM 13 C1' A A1120 58.649 80.043 190.615 1.00118.99 C
ATOM 14 N9 A A1120 59.211 79.136 189.606 1.00118.93 N
ATOM 15 C8 A A1120 59.667 79.462 188.347 1.00118.80 C
ATOM 16 N7 A A1120 60.147 78.445 187.674 1.00118.11 N
ATOM 17 C5 A A1120 59.994 77.372 188.540 1.00118.12 C
ATOM 18 C6 A A1120 60.316 76.010 188.418 1.00117.42 C
ATOM 19 N6 A A1120 60.881 75.479 187.329 1.00116.42 N
ATOM 20 N1 A A1120 60.034 75.203 189.465 1.00117.03 N
ATOM 21 C2 A A1120 59.467 75.738 190.555 1.00117.17 C
ATOM 22 N3 A A1120 59.117 77.001 190.790 1.00117.76 N
ATOM 23 C4 A A1120 59.412 77.779 189.732 1.00118.51 C
ATOM 24 P G A1121 62.777 81.998 192.082 1.00124.06 P
ATOM 25 OP1 G A1121 63.437 83.282 192.428 1.00123.96 O
ATOM 26 OP2 G A1121 63.234 81.237 190.883 1.00123.21 O
ATOM 27 O5' G A1121 62.877 81.047 193.351 1.00126.39 O
TER
ATOM 1 O3' G B1118 54.103 85.164 190.181 1.00105.91 O
ATOM 2 P G B1119 55.690 85.205 189.931 1.00105.89 P
ATOM 3 OP1 G B1119 56.359 84.846 191.212 1.00106.58 O
ATOM 4 OP2 G B1119 56.049 86.470 189.246 1.00105.30 O
ATOM 5 O5' G B1119 55.932 84.019 188.904 1.00105.18 O
ATOM 6 C5' G B1119 57.127 83.969 188.143 1.00105.22 C
ATOM 7 C4' G B1119 56.899 83.212 186.870 1.00106.40 C
ATOM 8 O4' G B1119 55.684 83.687 186.244 1.00106.52 O
ATOM 9 C3' G B1119 57.997 83.446 185.854 1.00107.84 C
ATOM 10 O3' G B1119 59.079 82.535 186.077 1.00110.72 O
ATOM 11 C2' G B1119 57.275 83.236 184.524 1.00107.15 C
ATOM 12 O2' G B1119 57.181 81.875 184.158 1.00106.82 O
ATOM 13 C1' G B1119 55.870 83.773 184.841 1.00106.34 C
ATOM 14 N9 G B1119 55.567 85.144 184.427 1.00105.30 N
ATOM 15 C8 G B1119 55.014 86.132 185.210 1.00104.88 C
ATOM 16 N7 G B1119 54.835 87.256 184.574 1.00104.50 N
ATOM 17 C5 G B1119 55.300 87.003 183.291 1.00104.60 C
ATOM 18 C6 G B1119 55.364 87.852 182.155 1.00104.77 C
ATOM 19 O6 G B1119 55.004 89.035 182.051 1.00104.22 O
ATOM 20 N1 G B1119 55.914 87.194 181.058 1.00104.83 N
ATOM 21 C2 G B1119 56.345 85.890 181.052 1.00104.36 C
ATOM 22 N2 G B1119 56.854 85.442 179.895 1.00102.98 N
ATOM 23 N3 G B1119 56.285 85.087 182.102 1.00104.69 N
ATOM 24 C4 G B1119 55.758 85.705 183.181 1.00104.76 C
ATOM 25 P A B1120 60.434 83.042 186.797 1.00111.82 P
ATOM 26 OP1 A B1120 60.396 84.523 186.867 1.00112.23 O
ATOM 27 OP2 A B1120 61.580 82.369 186.129 1.00112.16 O
ATOM 28 O5' A B1120 60.343 82.473 188.284 1.00113.06 O
TER
ATOM 2 P A A1120 60.434 83.042 186.797 1.00111.82 P
ATOM 3 OP1 A A1120 60.396 84.523 186.867 1.00112.23 O
ATOM 4 OP2 A A1120 61.580 82.369 186.129 1.00112.16 O
ATOM 5 O5' A A1120 60.343 82.473 188.284 1.00113.06 O
ATOM 6 C5' A A1120 59.695 83.220 189.329 1.00115.62 C
ATOM 7 C4' A A1120 59.293 82.306 190.462 1.00118.12 C
ATOM 8 O4' A A1120 58.367 81.288 189.984 1.00119.10 O
ATOM 9 C3' A A1120 60.423 81.500 191.069 1.00119.75 C
ATOM 10 O3' A A1120 61.199 82.271 191.967 1.00122.58 O
ATOM 11 C2' A A1120 59.668 80.347 191.712 1.00119.67 C
ATOM 12 O2' A A1120 58.980 80.722 192.892 1.00119.57 O
ATOM 13 C1' A A1120 58.649 80.043 190.615 1.00118.99 C
ATOM 14 N9 A A1120 59.211 79.136 189.606 1.00118.93 N
ATOM 15 C8 A A1120 59.667 79.462 188.347 1.00118.80 C
ATOM 16 N7 A A1120 60.147 78.445 187.674 1.00118.11 N
ATOM 17 C5 A A1120 59.994 77.372 188.540 1.00118.12 C
ATOM 18 C6 A A1120 60.316 76.010 188.418 1.00117.42 C
ATOM 19 N6 A A1120 60.881 75.479 187.329 1.00116.42 N
ATOM 20 N1 A A1120 60.034 75.203 189.465 1.00117.03 N
ATOM 21 C2 A A1120 59.467 75.738 190.555 1.00117.17 C
ATOM 22 N3 A A1120 59.117 77.001 190.790 1.00117.76 N
ATOM 23 C4 A A1120 59.412 77.779 189.732 1.00118.51 C
ATOM 24 P G A1121 62.777 81.998 192.082 1.00124.06 P
ATOM 25 OP1 G A1121 63.437 83.282 192.428 1.00123.96 O
ATOM 26 OP2 G A1121 63.234 81.237 190.883 1.00123.21 O
ATOM 27 O5' G A1121 62.877 81.047 193.351 1.00126.39 O
TER
ATOM 1 O3' G B1118 54.103 85.164 190.181 1.00105.91 O
ATOM 2 P G B1119 55.690 85.205 189.931 1.00105.89 P
ATOM 3 OP1 G B1119 56.359 84.846 191.212 1.00106.58 O
ATOM 4 OP2 G B1119 56.049 86.470 189.246 1.00105.30 O
ATOM 5 O5' G B1119 55.932 84.019 188.904 1.00105.18 O
ATOM 6 C5' G B1119 57.127 83.969 188.143 1.00105.22 C
ATOM 7 C4' G B1119 56.899 83.212 186.870 1.00106.40 C
ATOM 8 O4' G B1119 55.684 83.687 186.244 1.00106.52 O
ATOM 9 C3' G B1119 57.997 83.446 185.854 1.00107.84 C
ATOM 10 O3' G B1119 59.079 82.535 186.077 1.00110.72 O
ATOM 11 C2' G B1119 57.275 83.236 184.524 1.00107.15 C
ATOM 12 O2' G B1119 57.181 81.875 184.158 1.00106.82 O
ATOM 13 C1' G B1119 55.870 83.773 184.841 1.00106.34 C
ATOM 14 N9 G B1119 55.567 85.144 184.427 1.00105.30 N
ATOM 15 C8 G B1119 55.014 86.132 185.210 1.00104.88 C
ATOM 16 N7 G B1119 54.835 87.256 184.574 1.00104.50 N
ATOM 17 C5 G B1119 55.300 87.003 183.291 1.00104.60 C
ATOM 18 C6 G B1119 55.364 87.852 182.155 1.00104.77 C
ATOM 19 O6 G B1119 55.004 89.035 182.051 1.00104.22 O
ATOM 20 N1 G B1119 55.914 87.194 181.058 1.00104.83 N
ATOM 21 C2 G B1119 56.345 85.890 181.052 1.00104.36 C
ATOM 22 N2 G B1119 56.854 85.442 179.895 1.00102.98 N
ATOM 23 N3 G B1119 56.285 85.087 182.102 1.00104.69 N
ATOM 24 C4 G B1119 55.758 85.705 183.181 1.00104.76 C
ATOM 25 P A B1120 60.434 83.042 186.797 1.00111.82 P
ATOM 26 OP1 A B1120 60.396 84.523 186.867 1.00112.23 O
ATOM 27 OP2 A B1120 61.580 82.369 186.129 1.00112.16 O
ATOM 28 O5' A B1120 60.343 82.473 188.284 1.00113.06 O
TER
Atoms:
OP1: (60.396,84.523,186.867)
OP2: (61.580,82.369,186.129)
C3': (60.423,81.500,191.069)
C1': (58.649,80.043,190.615)
C5': (59.695,83.220,189.329)
O4': (58.367,81.288,189.984)
C8: (59.667,79.462,188.347)
O2': (58.980,80.722,192.892)
C6: (60.316,76.010,188.418)
C5: (59.994,77.372,188.540)
C4: (59.412,77.779,189.732)
P: (60.434,83.042,186.797)
C4': (59.293,82.306,190.462)
C2': (59.668,80.347,191.712)
C2: (59.467,75.738,190.555)
N1: (60.034,75.203,189.465)
N3: (59.117,77.001,190.790)
N6: (60.881,75.479,187.329)
N7: (60.147,78.445,187.674)
N9: (59.211,79.136,189.606)
O5': (60.343,82.473,188.284)
O3': (61.199,82.271,191.967)
OP2: (61.580,82.369,186.129)
C3': (60.423,81.500,191.069)
C1': (58.649,80.043,190.615)
C5': (59.695,83.220,189.329)
O4': (58.367,81.288,189.984)
C8: (59.667,79.462,188.347)
O2': (58.980,80.722,192.892)
C6: (60.316,76.010,188.418)
C5: (59.994,77.372,188.540)
C4: (59.412,77.779,189.732)
P: (60.434,83.042,186.797)
C4': (59.293,82.306,190.462)
C2': (59.668,80.347,191.712)
C2: (59.467,75.738,190.555)
N1: (60.034,75.203,189.465)
N3: (59.117,77.001,190.790)
N6: (60.881,75.479,187.329)
N7: (60.147,78.445,187.674)
N9: (59.211,79.136,189.606)
O5': (60.343,82.473,188.284)
O3': (61.199,82.271,191.967)
OP1: (56.359,84.846,191.212)
OP2: (56.049,86.470,189.246)
C3': (57.997,83.446,185.854)
C1': (55.870,83.773,184.841)
C5': (57.127,83.969,188.143)
O6: (55.004,89.035,182.051)
O4': (55.684,83.687,186.244)
C8: (55.014,86.132,185.210)
C2: (56.345,85.890,181.052)
C6: (55.364,87.852,182.155)
C5: (55.300,87.003,183.291)
C4: (55.758,85.705,183.181)
P: (55.690,85.205,189.931)
C4': (56.899,83.212,186.870)
C2': (57.275,83.236,184.524)
O2': (57.181,81.875,184.158)
N1: (55.914,87.194,181.058)
N2: (56.854,85.442,179.895)
N3: (56.285,85.087,182.102)
N7: (54.835,87.256,184.574)
N9: (55.567,85.144,184.427)
O5': (55.932,84.019,188.904)
O3': (59.079,82.535,186.077)
OP2: (56.049,86.470,189.246)
C3': (57.997,83.446,185.854)
C1': (55.870,83.773,184.841)
C5': (57.127,83.969,188.143)
O6: (55.004,89.035,182.051)
O4': (55.684,83.687,186.244)
C8: (55.014,86.132,185.210)
C2: (56.345,85.890,181.052)
C6: (55.364,87.852,182.155)
C5: (55.300,87.003,183.291)
C4: (55.758,85.705,183.181)
P: (55.690,85.205,189.931)
C4': (56.899,83.212,186.870)
C2': (57.275,83.236,184.524)
O2': (57.181,81.875,184.158)
N1: (55.914,87.194,181.058)
N2: (56.854,85.442,179.895)
N3: (56.285,85.087,182.102)
N7: (54.835,87.256,184.574)
N9: (55.567,85.144,184.427)
O5': (55.932,84.019,188.904)
O3': (59.079,82.535,186.077)
Image (generated by PyMOL):