Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11230:11229
Extra
PDB:
ATOM 1 O3' G A1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 2 P A A1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 3 OP1 A A1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 4 OP2 A A1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 5 O5' A A1230 30.441 6.455 -23.828 1.00133.90 O
ATOM 6 C5' A A1230 29.722 6.928 -22.697 1.00134.41 C
ATOM 7 C4' A A1230 29.398 5.799 -21.753 1.00134.74 C
ATOM 8 O4' A A1230 28.150 5.174 -22.170 1.00135.75 O
ATOM 9 C3' A A1230 30.440 4.677 -21.699 1.00134.04 C
ATOM 10 O3' A A1230 30.473 4.143 -20.375 1.00134.05 O
ATOM 11 C2' A A1230 29.857 3.645 -22.668 1.00134.57 C
ATOM 12 O2' A A1230 30.296 2.317 -22.466 1.00134.34 O
ATOM 13 C1' A A1230 28.363 3.796 -22.411 1.00135.70 C
ATOM 14 N9 A A1230 27.513 3.391 -23.532 1.00136.39 N
ATOM 15 C8 A A1230 27.414 3.962 -24.773 1.00136.42 C
ATOM 16 N7 A A1230 26.539 3.373 -25.551 1.00137.14 N
ATOM 17 C5 A A1230 26.022 2.346 -24.772 1.00137.62 C
ATOM 18 C6 A A1230 25.046 1.351 -25.008 1.00138.45 C
ATOM 19 N6 A A1230 24.385 1.214 -26.158 1.00138.98 N
ATOM 20 N1 A A1230 24.763 0.479 -24.013 1.00138.74 N
ATOM 21 C2 A A1230 25.421 0.609 -22.855 1.00138.23 C
ATOM 22 N3 A A1230 26.350 1.504 -22.515 1.00137.44 N
ATOM 23 C4 A A1230 26.611 2.354 -23.524 1.00137.17 C
ATOM 24 P A A1231 31.610 3.085 -19.918 1.00124.60 P
ATOM 25 OP1 A A1231 32.620 3.838 -19.108 1.00123.76 O
ATOM 26 OP2 A A1231 32.060 2.350 -21.147 1.00124.32 O
ATOM 27 O5' A A1231 30.797 2.098 -18.960 1.00125.30 O
TER
ATOM 1 O3' C B1228 24.396 10.818 -27.689 1.00144.12 O
ATOM 2 P G B1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 3 OP1 G B1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 4 OP2 G B1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 5 O5' G B1229 26.828 10.463 -28.132 1.00138.51 O
ATOM 6 C5' G B1229 27.111 10.571 -26.737 1.00138.28 C
ATOM 7 C4' G B1229 27.176 9.219 -26.064 1.00138.34 C
ATOM 8 O4' G B1229 25.987 8.458 -26.401 1.00139.31 O
ATOM 9 C3' G B1229 28.363 8.353 -26.458 1.00137.50 C
ATOM 10 O3' G B1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 11 C2' G B1229 27.784 7.407 -27.506 1.00138.02 C
ATOM 12 O2' G B1229 28.453 6.166 -27.609 1.00137.60 O
ATOM 13 C1' G B1229 26.347 7.233 -27.019 1.00139.13 C
ATOM 14 N9 G B1229 25.387 6.985 -28.095 1.00139.89 N
ATOM 15 C8 G B1229 25.373 7.629 -29.302 1.00139.85 C
ATOM 16 N7 G B1229 24.397 7.250 -30.075 1.00140.63 N
ATOM 17 C5 G B1229 23.722 6.302 -29.328 1.00141.22 C
ATOM 18 C6 G B1229 22.577 5.539 -29.654 1.00142.16 C
ATOM 19 O6 G B1229 21.908 5.544 -30.693 1.00142.68 O
ATOM 20 N1 G B1229 22.223 4.697 -28.613 1.00142.50 N
ATOM 21 C2 G B1229 22.878 4.594 -27.412 1.00142.00 C
ATOM 22 N2 G B1229 22.367 3.718 -26.534 1.00142.47 N
ATOM 23 N3 G B1229 23.953 5.298 -27.096 1.00141.12 N
ATOM 24 C4 G B1229 24.316 6.127 -28.097 1.00140.78 C
ATOM 25 P A B1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 26 OP1 A B1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 27 OP2 A B1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 28 O5' A B1230 30.441 6.455 -23.828 1.00133.90 O
TER
ATOM 2 P A A1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 3 OP1 A A1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 4 OP2 A A1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 5 O5' A A1230 30.441 6.455 -23.828 1.00133.90 O
ATOM 6 C5' A A1230 29.722 6.928 -22.697 1.00134.41 C
ATOM 7 C4' A A1230 29.398 5.799 -21.753 1.00134.74 C
ATOM 8 O4' A A1230 28.150 5.174 -22.170 1.00135.75 O
ATOM 9 C3' A A1230 30.440 4.677 -21.699 1.00134.04 C
ATOM 10 O3' A A1230 30.473 4.143 -20.375 1.00134.05 O
ATOM 11 C2' A A1230 29.857 3.645 -22.668 1.00134.57 C
ATOM 12 O2' A A1230 30.296 2.317 -22.466 1.00134.34 O
ATOM 13 C1' A A1230 28.363 3.796 -22.411 1.00135.70 C
ATOM 14 N9 A A1230 27.513 3.391 -23.532 1.00136.39 N
ATOM 15 C8 A A1230 27.414 3.962 -24.773 1.00136.42 C
ATOM 16 N7 A A1230 26.539 3.373 -25.551 1.00137.14 N
ATOM 17 C5 A A1230 26.022 2.346 -24.772 1.00137.62 C
ATOM 18 C6 A A1230 25.046 1.351 -25.008 1.00138.45 C
ATOM 19 N6 A A1230 24.385 1.214 -26.158 1.00138.98 N
ATOM 20 N1 A A1230 24.763 0.479 -24.013 1.00138.74 N
ATOM 21 C2 A A1230 25.421 0.609 -22.855 1.00138.23 C
ATOM 22 N3 A A1230 26.350 1.504 -22.515 1.00137.44 N
ATOM 23 C4 A A1230 26.611 2.354 -23.524 1.00137.17 C
ATOM 24 P A A1231 31.610 3.085 -19.918 1.00124.60 P
ATOM 25 OP1 A A1231 32.620 3.838 -19.108 1.00123.76 O
ATOM 26 OP2 A A1231 32.060 2.350 -21.147 1.00124.32 O
ATOM 27 O5' A A1231 30.797 2.098 -18.960 1.00125.30 O
TER
ATOM 1 O3' C B1228 24.396 10.818 -27.689 1.00144.12 O
ATOM 2 P G B1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 3 OP1 G B1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 4 OP2 G B1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 5 O5' G B1229 26.828 10.463 -28.132 1.00138.51 O
ATOM 6 C5' G B1229 27.111 10.571 -26.737 1.00138.28 C
ATOM 7 C4' G B1229 27.176 9.219 -26.064 1.00138.34 C
ATOM 8 O4' G B1229 25.987 8.458 -26.401 1.00139.31 O
ATOM 9 C3' G B1229 28.363 8.353 -26.458 1.00137.50 C
ATOM 10 O3' G B1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 11 C2' G B1229 27.784 7.407 -27.506 1.00138.02 C
ATOM 12 O2' G B1229 28.453 6.166 -27.609 1.00137.60 O
ATOM 13 C1' G B1229 26.347 7.233 -27.019 1.00139.13 C
ATOM 14 N9 G B1229 25.387 6.985 -28.095 1.00139.89 N
ATOM 15 C8 G B1229 25.373 7.629 -29.302 1.00139.85 C
ATOM 16 N7 G B1229 24.397 7.250 -30.075 1.00140.63 N
ATOM 17 C5 G B1229 23.722 6.302 -29.328 1.00141.22 C
ATOM 18 C6 G B1229 22.577 5.539 -29.654 1.00142.16 C
ATOM 19 O6 G B1229 21.908 5.544 -30.693 1.00142.68 O
ATOM 20 N1 G B1229 22.223 4.697 -28.613 1.00142.50 N
ATOM 21 C2 G B1229 22.878 4.594 -27.412 1.00142.00 C
ATOM 22 N2 G B1229 22.367 3.718 -26.534 1.00142.47 N
ATOM 23 N3 G B1229 23.953 5.298 -27.096 1.00141.12 N
ATOM 24 C4 G B1229 24.316 6.127 -28.097 1.00140.78 C
ATOM 25 P A B1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 26 OP1 A B1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 27 OP2 A B1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 28 O5' A B1230 30.441 6.455 -23.828 1.00133.90 O
TER
Atoms:
OP1: (31.133,8.434,-25.224)
OP2: (30.578,6.189,-26.331)
C3': (30.440,4.677,-21.699)
C1': (28.363,3.796,-22.411)
C5': (29.722,6.928,-22.697)
O4': (28.150,5.174,-22.170)
C8: (27.414,3.962,-24.773)
O2': (30.296,2.317,-22.466)
C6: (25.046,1.351,-25.008)
C5: (26.022,2.346,-24.772)
C4: (26.611,2.354,-23.524)
P: (30.338,7.178,-25.241)
C4': (29.398,5.799,-21.753)
C2': (29.857,3.645,-22.668)
C2: (25.421,0.609,-22.855)
N1: (24.763,0.479,-24.013)
N3: (26.350,1.504,-22.515)
N6: (24.385,1.214,-26.158)
N7: (26.539,3.373,-25.551)
N9: (27.513,3.391,-23.532)
O5': (30.441,6.455,-23.828)
O3': (30.473,4.143,-20.375)
OP2: (30.578,6.189,-26.331)
C3': (30.440,4.677,-21.699)
C1': (28.363,3.796,-22.411)
C5': (29.722,6.928,-22.697)
O4': (28.150,5.174,-22.170)
C8: (27.414,3.962,-24.773)
O2': (30.296,2.317,-22.466)
C6: (25.046,1.351,-25.008)
C5: (26.022,2.346,-24.772)
C4: (26.611,2.354,-23.524)
P: (30.338,7.178,-25.241)
C4': (29.398,5.799,-21.753)
C2': (29.857,3.645,-22.668)
C2: (25.421,0.609,-22.855)
N1: (24.763,0.479,-24.013)
N3: (26.350,1.504,-22.515)
N6: (24.385,1.214,-26.158)
N7: (26.539,3.373,-25.551)
N9: (27.513,3.391,-23.532)
O5': (30.441,6.455,-23.828)
O3': (30.473,4.143,-20.375)
OP1: (25.724,12.651,-28.727)
OP2: (25.181,10.527,-30.048)
C3': (28.363,8.353,-26.458)
C1': (26.347,7.233,-27.019)
C5': (27.111,10.571,-26.737)
O6: (21.908,5.544,-30.693)
O4': (25.987,8.458,-26.401)
C8: (25.373,7.629,-29.302)
C2: (22.878,4.594,-27.412)
C6: (22.577,5.539,-29.654)
C5: (23.722,6.302,-29.328)
C4: (24.316,6.127,-28.097)
P: (25.547,11.176,-28.759)
C4': (27.176,9.219,-26.064)
C2': (27.784,7.407,-27.506)
O2': (28.453,6.166,-27.609)
N1: (22.223,4.697,-28.613)
N2: (22.367,3.718,-26.534)
N3: (23.953,5.298,-27.096)
N7: (24.397,7.250,-30.075)
N9: (25.387,6.985,-28.095)
O5': (26.828,10.463,-28.132)
O3': (28.801,7.604,-25.334)
OP2: (25.181,10.527,-30.048)
C3': (28.363,8.353,-26.458)
C1': (26.347,7.233,-27.019)
C5': (27.111,10.571,-26.737)
O6: (21.908,5.544,-30.693)
O4': (25.987,8.458,-26.401)
C8: (25.373,7.629,-29.302)
C2: (22.878,4.594,-27.412)
C6: (22.577,5.539,-29.654)
C5: (23.722,6.302,-29.328)
C4: (24.316,6.127,-28.097)
P: (25.547,11.176,-28.759)
C4': (27.176,9.219,-26.064)
C2': (27.784,7.407,-27.506)
O2': (28.453,6.166,-27.609)
N1: (22.223,4.697,-28.613)
N2: (22.367,3.718,-26.534)
N3: (23.953,5.298,-27.096)
N7: (24.397,7.250,-30.075)
N9: (25.387,6.985,-28.095)
O5': (26.828,10.463,-28.132)
O3': (28.801,7.604,-25.334)
Image (generated by PyMOL):