Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1041:A1040
Extra
PDB:
ATOM 1 O3' G A1040 -120.442 76.570 171.444 1.00 85.66 O
ATOM 2 P A A1041 -119.327 76.539 170.270 1.00 71.12 P
ATOM 3 OP1 A A1041 -119.993 76.047 169.041 1.00 71.12 O
ATOM 4 OP2 A A1041 -118.143 75.787 170.796 1.00 71.12 O
ATOM 5 O5' A A1041 -118.954 78.076 170.096 1.00 71.12 O
ATOM 6 C5' A A1041 -119.806 78.973 169.393 1.00 71.12 C
ATOM 7 C4' A A1041 -119.356 80.397 169.586 1.00 71.12 C
ATOM 8 O4' A A1041 -119.831 80.892 170.872 1.00 71.12 O
ATOM 9 C3' A A1041 -117.846 80.594 169.631 1.00 71.12 C
ATOM 10 O3' A A1041 -117.273 80.734 168.341 1.00 71.12 O
ATOM 11 C2' A A1041 -117.690 81.822 170.511 1.00 71.12 C
ATOM 12 O2' A A1041 -117.976 83.005 169.776 1.00 71.12 O
ATOM 13 C1' A A1041 -118.804 81.596 171.532 1.00 71.12 C
ATOM 14 N9 A A1041 -118.359 80.774 172.677 1.00 70.16 N
ATOM 15 C8 A A1041 -118.645 79.441 172.803 1.00 70.16 C
ATOM 16 N7 A A1041 -118.178 78.882 173.888 1.00 70.16 N
ATOM 17 C5 A A1041 -117.542 79.911 174.549 1.00 70.16 C
ATOM 18 C6 A A1041 -116.854 79.933 175.772 1.00 70.16 C
ATOM 19 N6 A A1041 -116.692 78.867 176.554 1.00 70.16 N
ATOM 20 N1 A A1041 -116.331 81.111 176.165 1.00 70.16 N
ATOM 21 C2 A A1041 -116.501 82.183 175.371 1.00 70.16 C
ATOM 22 N3 A A1041 -117.132 82.280 174.195 1.00 70.16 N
ATOM 23 C4 A A1041 -117.646 81.092 173.822 1.00 70.16 C
ATOM 24 P C A1042 -115.862 80.038 167.991 1.00 66.82 P
ATOM 25 OP1 C A1042 -115.476 80.496 166.625 1.00 66.82 O
ATOM 26 OP2 C A1042 -116.011 78.575 168.242 1.00 66.82 O
ATOM 27 O5' C A1042 -114.881 80.675 169.076 1.00 66.82 O
TER
ATOM 1 O3' A B1039 -126.960 78.119 170.491 1.00 90.94 O
ATOM 2 P G B1040 -125.596 78.454 169.691 1.00 85.66 P
ATOM 3 OP1 G B1040 -125.717 79.850 169.184 1.00 85.66 O
ATOM 4 OP2 G B1040 -125.383 77.351 168.709 1.00 85.66 O
ATOM 5 O5' G B1040 -124.481 78.391 170.832 1.00 85.66 O
ATOM 6 C5' G B1040 -123.183 78.947 170.620 1.00 85.66 C
ATOM 7 C4' G B1040 -122.149 78.292 171.499 1.00 85.66 C
ATOM 8 O4' G B1040 -122.653 78.258 172.859 1.00 85.66 O
ATOM 9 C3' G B1040 -121.812 76.850 171.133 1.00 85.66 C
ATOM 10 O3' G B1040 -120.442 76.570 171.444 1.00 85.66 O
ATOM 11 C2' G B1040 -122.734 76.048 172.045 1.00 85.66 C
ATOM 12 O2' G B1040 -122.297 74.736 172.330 1.00 85.66 O
ATOM 13 C1' G B1040 -122.780 76.920 173.298 1.00 85.66 C
ATOM 14 N9 G B1040 -124.035 76.811 174.036 1.00 84.82 N
ATOM 15 C8 G B1040 -125.288 77.046 173.527 1.00 84.82 C
ATOM 16 N7 G B1040 -126.225 76.860 174.404 1.00 84.82 N
ATOM 17 C5 G B1040 -125.547 76.484 175.557 1.00 84.82 C
ATOM 18 C6 G B1040 -126.034 76.145 176.846 1.00 84.82 C
ATOM 19 O6 G B1040 -127.206 76.124 177.241 1.00 84.82 O
ATOM 20 N1 G B1040 -125.012 75.825 177.733 1.00 84.82 N
ATOM 21 C2 G B1040 -123.683 75.819 177.428 1.00 84.82 C
ATOM 22 N2 G B1040 -122.867 75.481 178.433 1.00 84.82 N
ATOM 23 N3 G B1040 -123.209 76.124 176.229 1.00 84.82 N
ATOM 24 C4 G B1040 -124.190 76.445 175.349 1.00 84.82 C
ATOM 25 P A B1041 -119.327 76.539 170.270 1.00 71.12 P
ATOM 26 OP1 A B1041 -119.993 76.047 169.041 1.00 71.12 O
ATOM 27 OP2 A B1041 -118.143 75.787 170.796 1.00 71.12 O
ATOM 28 O5' A B1041 -118.954 78.076 170.096 1.00 71.12 O
TER
ATOM 2 P A A1041 -119.327 76.539 170.270 1.00 71.12 P
ATOM 3 OP1 A A1041 -119.993 76.047 169.041 1.00 71.12 O
ATOM 4 OP2 A A1041 -118.143 75.787 170.796 1.00 71.12 O
ATOM 5 O5' A A1041 -118.954 78.076 170.096 1.00 71.12 O
ATOM 6 C5' A A1041 -119.806 78.973 169.393 1.00 71.12 C
ATOM 7 C4' A A1041 -119.356 80.397 169.586 1.00 71.12 C
ATOM 8 O4' A A1041 -119.831 80.892 170.872 1.00 71.12 O
ATOM 9 C3' A A1041 -117.846 80.594 169.631 1.00 71.12 C
ATOM 10 O3' A A1041 -117.273 80.734 168.341 1.00 71.12 O
ATOM 11 C2' A A1041 -117.690 81.822 170.511 1.00 71.12 C
ATOM 12 O2' A A1041 -117.976 83.005 169.776 1.00 71.12 O
ATOM 13 C1' A A1041 -118.804 81.596 171.532 1.00 71.12 C
ATOM 14 N9 A A1041 -118.359 80.774 172.677 1.00 70.16 N
ATOM 15 C8 A A1041 -118.645 79.441 172.803 1.00 70.16 C
ATOM 16 N7 A A1041 -118.178 78.882 173.888 1.00 70.16 N
ATOM 17 C5 A A1041 -117.542 79.911 174.549 1.00 70.16 C
ATOM 18 C6 A A1041 -116.854 79.933 175.772 1.00 70.16 C
ATOM 19 N6 A A1041 -116.692 78.867 176.554 1.00 70.16 N
ATOM 20 N1 A A1041 -116.331 81.111 176.165 1.00 70.16 N
ATOM 21 C2 A A1041 -116.501 82.183 175.371 1.00 70.16 C
ATOM 22 N3 A A1041 -117.132 82.280 174.195 1.00 70.16 N
ATOM 23 C4 A A1041 -117.646 81.092 173.822 1.00 70.16 C
ATOM 24 P C A1042 -115.862 80.038 167.991 1.00 66.82 P
ATOM 25 OP1 C A1042 -115.476 80.496 166.625 1.00 66.82 O
ATOM 26 OP2 C A1042 -116.011 78.575 168.242 1.00 66.82 O
ATOM 27 O5' C A1042 -114.881 80.675 169.076 1.00 66.82 O
TER
ATOM 1 O3' A B1039 -126.960 78.119 170.491 1.00 90.94 O
ATOM 2 P G B1040 -125.596 78.454 169.691 1.00 85.66 P
ATOM 3 OP1 G B1040 -125.717 79.850 169.184 1.00 85.66 O
ATOM 4 OP2 G B1040 -125.383 77.351 168.709 1.00 85.66 O
ATOM 5 O5' G B1040 -124.481 78.391 170.832 1.00 85.66 O
ATOM 6 C5' G B1040 -123.183 78.947 170.620 1.00 85.66 C
ATOM 7 C4' G B1040 -122.149 78.292 171.499 1.00 85.66 C
ATOM 8 O4' G B1040 -122.653 78.258 172.859 1.00 85.66 O
ATOM 9 C3' G B1040 -121.812 76.850 171.133 1.00 85.66 C
ATOM 10 O3' G B1040 -120.442 76.570 171.444 1.00 85.66 O
ATOM 11 C2' G B1040 -122.734 76.048 172.045 1.00 85.66 C
ATOM 12 O2' G B1040 -122.297 74.736 172.330 1.00 85.66 O
ATOM 13 C1' G B1040 -122.780 76.920 173.298 1.00 85.66 C
ATOM 14 N9 G B1040 -124.035 76.811 174.036 1.00 84.82 N
ATOM 15 C8 G B1040 -125.288 77.046 173.527 1.00 84.82 C
ATOM 16 N7 G B1040 -126.225 76.860 174.404 1.00 84.82 N
ATOM 17 C5 G B1040 -125.547 76.484 175.557 1.00 84.82 C
ATOM 18 C6 G B1040 -126.034 76.145 176.846 1.00 84.82 C
ATOM 19 O6 G B1040 -127.206 76.124 177.241 1.00 84.82 O
ATOM 20 N1 G B1040 -125.012 75.825 177.733 1.00 84.82 N
ATOM 21 C2 G B1040 -123.683 75.819 177.428 1.00 84.82 C
ATOM 22 N2 G B1040 -122.867 75.481 178.433 1.00 84.82 N
ATOM 23 N3 G B1040 -123.209 76.124 176.229 1.00 84.82 N
ATOM 24 C4 G B1040 -124.190 76.445 175.349 1.00 84.82 C
ATOM 25 P A B1041 -119.327 76.539 170.270 1.00 71.12 P
ATOM 26 OP1 A B1041 -119.993 76.047 169.041 1.00 71.12 O
ATOM 27 OP2 A B1041 -118.143 75.787 170.796 1.00 71.12 O
ATOM 28 O5' A B1041 -118.954 78.076 170.096 1.00 71.12 O
TER
Atoms:
OP1: (-119.993,76.047,169.041)
OP2: (-118.143,75.787,170.796)
C3': (-117.846,80.594,169.631)
C1': (-118.804,81.596,171.532)
C5': (-119.806,78.973,169.393)
O4': (-119.831,80.892,170.872)
C8: (-118.645,79.441,172.803)
O2': (-117.976,83.005,169.776)
C6: (-116.854,79.933,175.772)
C5: (-117.542,79.911,174.549)
C4: (-117.646,81.092,173.822)
P: (-119.327,76.539,170.270)
C4': (-119.356,80.397,169.586)
C2': (-117.690,81.822,170.511)
C2: (-116.501,82.183,175.371)
N1: (-116.331,81.111,176.165)
N3: (-117.132,82.280,174.195)
N6: (-116.692,78.867,176.554)
N7: (-118.178,78.882,173.888)
N9: (-118.359,80.774,172.677)
O5': (-118.954,78.076,170.096)
O3': (-117.273,80.734,168.341)
OP2: (-118.143,75.787,170.796)
C3': (-117.846,80.594,169.631)
C1': (-118.804,81.596,171.532)
C5': (-119.806,78.973,169.393)
O4': (-119.831,80.892,170.872)
C8: (-118.645,79.441,172.803)
O2': (-117.976,83.005,169.776)
C6: (-116.854,79.933,175.772)
C5: (-117.542,79.911,174.549)
C4: (-117.646,81.092,173.822)
P: (-119.327,76.539,170.270)
C4': (-119.356,80.397,169.586)
C2': (-117.690,81.822,170.511)
C2: (-116.501,82.183,175.371)
N1: (-116.331,81.111,176.165)
N3: (-117.132,82.280,174.195)
N6: (-116.692,78.867,176.554)
N7: (-118.178,78.882,173.888)
N9: (-118.359,80.774,172.677)
O5': (-118.954,78.076,170.096)
O3': (-117.273,80.734,168.341)
OP1: (-125.717,79.850,169.184)
OP2: (-125.383,77.351,168.709)
C3': (-121.812,76.850,171.133)
C1': (-122.780,76.920,173.298)
C5': (-123.183,78.947,170.620)
O6: (-127.206,76.124,177.241)
O4': (-122.653,78.258,172.859)
C8: (-125.288,77.046,173.527)
C2: (-123.683,75.819,177.428)
C6: (-126.034,76.145,176.846)
C5: (-125.547,76.484,175.557)
C4: (-124.190,76.445,175.349)
P: (-125.596,78.454,169.691)
C4': (-122.149,78.292,171.499)
C2': (-122.734,76.048,172.045)
O2': (-122.297,74.736,172.330)
N1: (-125.012,75.825,177.733)
N2: (-122.867,75.481,178.433)
N3: (-123.209,76.124,176.229)
N7: (-126.225,76.860,174.404)
N9: (-124.035,76.811,174.036)
O5': (-124.481,78.391,170.832)
O3': (-120.442,76.570,171.444)
OP2: (-125.383,77.351,168.709)
C3': (-121.812,76.850,171.133)
C1': (-122.780,76.920,173.298)
C5': (-123.183,78.947,170.620)
O6: (-127.206,76.124,177.241)
O4': (-122.653,78.258,172.859)
C8: (-125.288,77.046,173.527)
C2: (-123.683,75.819,177.428)
C6: (-126.034,76.145,176.846)
C5: (-125.547,76.484,175.557)
C4: (-124.190,76.445,175.349)
P: (-125.596,78.454,169.691)
C4': (-122.149,78.292,171.499)
C2': (-122.734,76.048,172.045)
O2': (-122.297,74.736,172.330)
N1: (-125.012,75.825,177.733)
N2: (-122.867,75.481,178.433)
N3: (-123.209,76.124,176.229)
N7: (-126.225,76.860,174.404)
N9: (-124.035,76.811,174.036)
O5': (-124.481,78.391,170.832)
O3': (-120.442,76.570,171.444)
Image (generated by PyMOL):