ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A388:A387

Extra

PDB:
ATOM 1 O3' G A 387 -13.682 193.496 136.682 1.00 11.53 O
ATOM 2 P U A 388 -14.715 192.455 137.350 1.00 6.99 P
ATOM 3 OP1 U A 388 -13.897 191.370 137.954 1.00 27.81 O
ATOM 4 OP2 U A 388 -15.819 192.117 136.410 1.00 27.81 O
ATOM 5 O5' U A 388 -15.370 193.321 138.512 1.00 16.93 O
ATOM 6 C5' U A 388 -14.589 193.702 139.671 1.00 16.93 C
ATOM 7 C4' U A 388 -15.035 195.042 140.198 1.00 16.93 C
ATOM 8 O4' U A 388 -14.464 196.115 139.408 1.00 16.93 O
ATOM 9 C3' U A 388 -16.534 195.290 140.181 1.00 16.93 C
ATOM 10 O3' U A 388 -17.182 194.690 141.305 1.00 16.93 O
ATOM 11 C2' U A 388 -16.606 196.812 140.184 1.00 16.93 C
ATOM 12 O2' U A 388 -16.464 197.357 141.473 1.00 16.93 O
ATOM 13 C1' U A 388 -15.375 197.192 139.355 1.00 16.93 C
ATOM 14 N1 U A 388 -15.704 197.450 137.948 1.00 36.60 N
ATOM 15 C2 U A 388 -16.586 198.479 137.678 1.00 36.72 C
ATOM 16 O2 U A 388 -17.075 199.178 138.552 1.00 36.77 O
ATOM 17 N3 U A 388 -16.876 198.661 136.354 1.00 36.79 N
ATOM 18 C4 U A 388 -16.385 197.947 135.303 1.00 36.72 C
ATOM 19 O4 U A 388 -16.753 198.227 134.167 1.00 36.73 O
ATOM 20 C5 U A 388 -15.469 196.909 135.659 1.00 36.71 C
ATOM 21 C6 U A 388 -15.169 196.702 136.937 1.00 36.61 C
ATOM 22 P A A 389 -18.591 193.928 141.108 1.00 12.78 P
ATOM 23 OP1 A A 389 -18.820 193.069 142.293 1.00 43.23 O
ATOM 24 OP2 A A 389 -18.619 193.331 139.740 1.00 43.45 O
ATOM 25 O5' A A 389 -19.670 195.092 141.160 1.00 12.44 O
TER

ATOM 1 O3' A B 386 -10.548 196.946 137.396 1.00 29.10 O
ATOM 2 P G B 387 -9.132 196.376 136.914 1.00 43.96 P
ATOM 3 OP1 G B 387 -8.599 195.513 138.007 1.00 43.84 O
ATOM 4 OP2 G B 387 -8.313 197.508 136.401 1.00 43.84 O
ATOM 5 O5' G B 387 -9.523 195.447 135.680 1.00 11.53 O
ATOM 6 C5' G B 387 -10.158 194.161 135.888 1.00 11.53 C
ATOM 7 C4' G B 387 -11.660 194.284 135.754 1.00 11.53 C
ATOM 8 O4' G B 387 -12.013 194.606 134.380 1.00 11.53 O
ATOM 9 C3' G B 387 -12.470 193.036 136.094 1.00 11.53 C
ATOM 10 O3' G B 387 -13.682 193.496 136.682 1.00 11.53 O
ATOM 11 C2' G B 387 -12.825 192.487 134.725 1.00 11.53 C
ATOM 12 O2' G B 387 -13.984 191.697 134.745 1.00 11.53 O
ATOM 13 C1' G B 387 -13.087 193.787 133.986 1.00 11.53 C
ATOM 14 N9 G B 387 -13.156 193.723 132.534 1.00 30.69 N
ATOM 15 C8 G B 387 -12.395 192.954 131.699 1.00 30.69 C
ATOM 16 N7 G B 387 -12.713 193.099 130.442 1.00 30.69 N
ATOM 17 C5 G B 387 -13.743 194.023 130.449 1.00 30.69 C
ATOM 18 C6 G B 387 -14.499 194.566 129.375 1.00 30.69 C
ATOM 19 O6 G B 387 -14.412 194.317 128.164 1.00 30.69 O
ATOM 20 N1 G B 387 -15.441 195.482 129.825 1.00 30.69 N
ATOM 21 C2 G B 387 -15.637 195.823 131.134 1.00 30.69 C
ATOM 22 N2 G B 387 -16.587 196.739 131.363 1.00 30.69 N
ATOM 23 N3 G B 387 -14.951 195.310 132.146 1.00 30.69 N
ATOM 24 C4 G B 387 -14.025 194.425 131.731 1.00 30.69 C
ATOM 25 P U B 388 -14.715 192.455 137.350 1.00 6.99 P
ATOM 26 OP1 U B 388 -13.897 191.370 137.954 1.00 27.81 O
ATOM 27 OP2 U B 388 -15.819 192.117 136.410 1.00 27.81 O
ATOM 28 O5' U B 388 -15.370 193.321 138.512 1.00 16.93 O
TER

Atoms:
C4: (-16.385,197.947,135.303)
N3: (-16.876,198.661,136.354)
OP1: (-13.897,191.370,137.954)
OP2: (-15.819,192.117,136.410)
C2: (-16.586,198.479,137.678)
C1': (-15.375,197.192,139.355)
C3': (-16.534,195.290,140.181)
O5': (-15.370,193.321,138.512)
O4': (-14.464,196.115,139.408)
C5': (-14.589,193.702,139.671)
P: (-14.715,192.455,137.350)
C4': (-15.035,195.042,140.198)
C2': (-16.606,196.812,140.184)
O2': (-16.464,197.357,141.473)
N1: (-15.704,197.450,137.948)
O4: (-16.753,198.227,134.167)
O2: (-17.075,199.178,138.552)
C6: (-15.169,196.702,136.937)
C5: (-15.469,196.909,135.659)
O3': (-17.182,194.690,141.305)
OP1: (-8.599,195.513,138.007)
OP2: (-8.313,197.508,136.401)
C3': (-12.470,193.036,136.094)
C1': (-13.087,193.787,133.986)
C5': (-10.158,194.161,135.888)
O6: (-14.412,194.317,128.164)
O4': (-12.013,194.606,134.380)
C8: (-12.395,192.954,131.699)
C2: (-15.637,195.823,131.134)
C6: (-14.499,194.566,129.375)
C5: (-13.743,194.023,130.449)
C4: (-14.025,194.425,131.731)
P: (-9.132,196.376,136.914)
C4': (-11.660,194.284,135.754)
C2': (-12.825,192.487,134.725)
O2': (-13.984,191.697,134.745)
N1: (-15.441,195.482,129.825)
N2: (-16.587,196.739,131.363)
N3: (-14.951,195.310,132.146)
N7: (-12.713,193.099,130.442)
N9: (-13.156,193.723,132.534)
O5': (-9.523,195.447,135.680)
O3': (-13.682,193.496,136.682)
Image (generated by PyMOL):
PyMOL image
show in jmol