ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A1216:A1215

Extra

PDB:
ATOM 1 O3' G A1215 -0.294 114.061 194.922 1.00 2.89 O
ATOM 2 P U A1216 0.583 112.990 194.092 1.00 13.41 P
ATOM 3 OP1 U A1216 0.731 111.787 194.954 1.00 19.86 O
ATOM 4 OP2 U A1216 1.801 113.619 193.495 1.00 19.66 O
ATOM 5 O5' U A1216 -0.384 112.627 192.892 1.00 2.46 O
ATOM 6 C5' U A1216 -1.665 112.036 193.145 1.00 2.46 C
ATOM 7 C4' U A1216 -2.702 112.635 192.229 1.00 2.46 C
ATOM 8 O4' U A1216 -3.140 113.919 192.744 1.00 2.46 O
ATOM 9 C3' U A1216 -2.240 112.914 190.812 1.00 2.46 C
ATOM 10 O3' U A1216 -2.321 111.736 189.997 1.00 2.46 O
ATOM 11 C2' U A1216 -3.212 114.003 190.385 1.00 2.46 C
ATOM 12 O2' U A1216 -4.464 113.439 190.083 1.00 2.46 O
ATOM 13 C1' U A1216 -3.416 114.797 191.678 1.00 2.46 C
ATOM 14 N1 U A1216 -2.591 116.008 191.851 1.00 16.22 N
ATOM 15 C2 U A1216 -2.502 116.931 190.802 1.00 16.22 C
ATOM 16 O2 U A1216 -3.015 116.768 189.715 1.00 16.22 O
ATOM 17 N3 U A1216 -1.775 118.055 191.079 1.00 16.22 N
ATOM 18 C4 U A1216 -1.131 118.353 192.244 1.00 16.22 C
ATOM 19 O4 U A1216 -0.595 119.444 192.362 1.00 16.22 O
ATOM 20 C5 U A1216 -1.227 117.350 193.258 1.00 16.22 C
ATOM 21 C6 U A1216 -1.935 116.243 193.035 1.00 16.22 C
ATOM 22 P A A1217 -1.101 111.354 188.991 1.00 22.18 P
ATOM 23 OP1 A A1217 -1.483 110.040 188.418 1.00 44.40 O
ATOM 24 OP2 A A1217 0.223 111.498 189.653 1.00 44.40 O
ATOM 25 O5' A A1217 -1.194 112.457 187.839 1.00 3.14 O
TER

ATOM 1 O3' A B1214 -4.319 116.454 197.008 1.00 15.16 O
ATOM 2 P G B1215 -4.586 115.580 198.316 1.00 7.71 P
ATOM 3 OP1 G B1215 -5.421 114.395 197.938 1.00 33.16 O
ATOM 4 OP2 G B1215 -5.083 116.516 199.333 1.00 33.37 O
ATOM 5 O5' G B1215 -3.128 115.097 198.717 1.00 2.89 O
ATOM 6 C5' G B1215 -2.440 114.075 197.958 1.00 2.89 C
ATOM 7 C4' G B1215 -1.655 114.699 196.824 1.00 2.89 C
ATOM 8 O4' G B1215 -1.203 116.021 197.213 1.00 2.89 O
ATOM 9 C3' G B1215 -0.408 113.948 196.348 1.00 2.89 C
ATOM 10 O3' G B1215 -0.294 114.061 194.922 1.00 2.89 O
ATOM 11 C2' G B1215 0.721 114.774 196.959 1.00 2.89 C
ATOM 12 O2' G B1215 1.925 114.695 196.237 1.00 2.89 O
ATOM 13 C1' G B1215 0.136 116.168 196.821 1.00 2.89 C
ATOM 14 N9 G B1215 0.736 117.252 197.577 1.00 29.94 N
ATOM 15 C8 G B1215 1.010 117.294 198.917 1.00 29.97 C
ATOM 16 N7 G B1215 1.485 118.444 199.302 1.00 30.02 N
ATOM 17 C5 G B1215 1.539 119.192 198.141 1.00 30.03 C
ATOM 18 C6 G B1215 1.941 120.526 197.938 1.00 30.03 C
ATOM 19 O6 G B1215 2.333 121.350 198.778 1.00 29.99 O
ATOM 20 N1 G B1215 1.843 120.889 196.597 1.00 29.99 N
ATOM 21 C2 G B1215 1.408 120.068 195.591 1.00 29.89 C
ATOM 22 N2 G B1215 1.412 120.595 194.366 1.00 29.86 N
ATOM 23 N3 G B1215 1.008 118.828 195.776 1.00 29.92 N
ATOM 24 C4 G B1215 1.100 118.460 197.067 1.00 30.01 C
ATOM 25 P U B1216 0.583 112.990 194.092 1.00 13.41 P
ATOM 26 OP1 U B1216 0.731 111.787 194.954 1.00 19.86 O
ATOM 27 OP2 U B1216 1.801 113.619 193.495 1.00 19.66 O
ATOM 28 O5' U B1216 -0.384 112.627 192.892 1.00 2.46 O
TER

Atoms:
C4: (-1.131,118.353,192.244)
N3: (-1.775,118.055,191.079)
OP1: (0.731,111.787,194.954)
OP2: (1.801,113.619,193.495)
C2: (-2.502,116.931,190.802)
C1': (-3.416,114.797,191.678)
C3': (-2.240,112.914,190.812)
O5': (-0.384,112.627,192.892)
O4': (-3.140,113.919,192.744)
C5': (-1.665,112.036,193.145)
P: (0.583,112.990,194.092)
C4': (-2.702,112.635,192.229)
C2': (-3.212,114.003,190.385)
O2': (-4.464,113.439,190.083)
N1: (-2.591,116.008,191.851)
O4: (-0.595,119.444,192.362)
O2: (-3.015,116.768,189.715)
C6: (-1.935,116.243,193.035)
C5: (-1.227,117.350,193.258)
O3': (-2.321,111.736,189.997)
OP1: (-5.421,114.395,197.938)
OP2: (-5.083,116.516,199.333)
C3': (-0.408,113.948,196.348)
C1': (0.136,116.168,196.821)
C5': (-2.440,114.075,197.958)
O6: (2.333,121.350,198.778)
O4': (-1.203,116.021,197.213)
C8: (1.010,117.294,198.917)
C2: (1.408,120.068,195.591)
C6: (1.941,120.526,197.938)
C5: (1.539,119.192,198.141)
C4: (1.100,118.460,197.067)
P: (-4.586,115.580,198.316)
C4': (-1.655,114.699,196.824)
C2': (0.721,114.774,196.959)
O2': (1.925,114.695,196.237)
N1: (1.843,120.889,196.597)
N2: (1.412,120.595,194.366)
N3: (1.008,118.828,195.776)
N7: (1.485,118.444,199.302)
N9: (0.736,117.252,197.577)
O5': (-3.128,115.097,198.717)
O3': (-0.294,114.061,194.922)
Image (generated by PyMOL):
PyMOL image
show in jmol