ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A889:A888

Extra

PDB:
ATOM 1 O3' G A 888 -25.953 96.788 94.984 1.00 12.46 O
ATOM 2 P U A 889 -25.446 97.739 96.170 1.00 8.22 P
ATOM 3 OP1 U A 889 -25.845 99.107 95.812 1.00 8.22 O
ATOM 4 OP2 U A 889 -24.026 97.453 96.387 1.00 8.22 O
ATOM 5 O5' U A 889 -26.292 97.242 97.408 1.00 8.22 O
ATOM 6 C5' U A 889 -27.631 97.665 97.571 1.00 8.22 C
ATOM 7 C4' U A 889 -28.492 96.575 98.154 1.00 8.22 C
ATOM 8 O4' U A 889 -28.696 95.518 97.172 1.00 8.22 O
ATOM 9 C3' U A 889 -27.925 95.834 99.354 1.00 8.22 C
ATOM 10 O3' U A 889 -28.014 96.565 100.566 1.00 8.22 O
ATOM 11 C2' U A 889 -28.753 94.568 99.344 1.00 8.22 C
ATOM 12 O2' U A 889 -30.079 94.841 99.783 1.00 8.22 O
ATOM 13 C1' U A 889 -28.794 94.273 97.842 1.00 8.22 C
ATOM 14 N1 U A 889 -27.664 93.399 97.408 1.00 8.44 N
ATOM 15 C2 U A 889 -27.574 92.160 97.986 1.00 8.44 C
ATOM 16 O2 U A 889 -28.345 91.759 98.825 1.00 8.44 O
ATOM 17 N3 U A 889 -26.548 91.380 97.561 1.00 8.44 N
ATOM 18 C4 U A 889 -25.598 91.674 96.619 1.00 8.44 C
ATOM 19 O4 U A 889 -24.727 90.822 96.365 1.00 8.44 O
ATOM 20 C5 U A 889 -25.750 92.975 96.044 1.00 8.44 C
ATOM 21 C6 U A 889 -26.753 93.761 96.451 1.00 8.44 C
ATOM 22 P A A 890 -26.678 96.881 101.411 1.00 5.78 P
ATOM 23 OP1 A A 890 -26.917 98.163 102.141 1.00 5.78 O
ATOM 24 OP2 A A 890 -25.543 96.794 100.464 1.00 5.78 O
ATOM 25 O5' A A 890 -26.609 95.673 102.445 1.00 5.78 O
TER

ATOM 1 O3' A B 887 -29.717 94.828 92.015 1.00 22.22 O
ATOM 2 P G B 888 -29.625 96.382 91.692 1.00 12.46 P
ATOM 3 OP1 G B 888 -29.479 97.098 92.974 1.00 12.46 O
ATOM 4 OP2 G B 888 -30.776 96.711 90.810 1.00 12.46 O
ATOM 5 O5' G B 888 -28.277 96.457 90.866 1.00 12.46 O
ATOM 6 C5' G B 888 -27.105 97.012 91.434 1.00 12.46 C
ATOM 7 C4' G B 888 -26.737 96.353 92.730 1.00 12.46 C
ATOM 8 O4' G B 888 -26.010 95.118 92.449 1.00 12.46 O
ATOM 9 C3' G B 888 -25.801 97.182 93.611 1.00 12.46 C
ATOM 10 O3' G B 888 -25.953 96.788 94.984 1.00 12.46 O
ATOM 11 C2' G B 888 -24.458 96.723 93.112 1.00 12.46 C
ATOM 12 O2' G B 888 -23.377 97.028 93.954 1.00 12.46 O
ATOM 13 C1' G B 888 -24.716 95.229 93.017 1.00 12.46 C
ATOM 14 N9 G B 888 -23.780 94.533 92.171 1.00 12.63 N
ATOM 15 C8 G B 888 -23.197 95.077 91.074 1.00 12.63 C
ATOM 16 N7 G B 888 -22.390 94.241 90.504 1.00 12.63 N
ATOM 17 C5 G B 888 -22.448 93.097 91.279 1.00 12.63 C
ATOM 18 C6 G B 888 -21.770 91.872 91.117 1.00 12.63 C
ATOM 19 O6 G B 888 -20.959 91.597 90.218 1.00 12.63 O
ATOM 20 N1 G B 888 -22.111 90.966 92.126 1.00 12.63 N
ATOM 21 C2 G B 888 -22.986 91.223 93.159 1.00 12.63 C
ATOM 22 N2 G B 888 -23.178 90.233 94.046 1.00 12.63 N
ATOM 23 N3 G B 888 -23.627 92.376 93.311 1.00 12.63 N
ATOM 24 C4 G B 888 -23.306 93.260 92.336 1.00 12.63 C
ATOM 25 P U B 889 -25.446 97.739 96.170 1.00 8.22 P
ATOM 26 OP1 U B 889 -25.845 99.107 95.812 1.00 8.22 O
ATOM 27 OP2 U B 889 -24.026 97.453 96.387 1.00 8.22 O
ATOM 28 O5' U B 889 -26.292 97.242 97.408 1.00 8.22 O
TER

Atoms:
C4: (-25.598,91.674,96.619)
N3: (-26.548,91.380,97.561)
OP1: (-25.845,99.107,95.812)
OP2: (-24.026,97.453,96.387)
C2: (-27.574,92.160,97.986)
C1': (-28.794,94.273,97.842)
C3': (-27.925,95.834,99.354)
O5': (-26.292,97.242,97.408)
O4': (-28.696,95.518,97.172)
C5': (-27.631,97.665,97.571)
P: (-25.446,97.739,96.170)
C4': (-28.492,96.575,98.154)
C2': (-28.753,94.568,99.344)
O2': (-30.079,94.841,99.783)
N1: (-27.664,93.399,97.408)
O4: (-24.727,90.822,96.365)
O2: (-28.345,91.759,98.825)
C6: (-26.753,93.761,96.451)
C5: (-25.750,92.975,96.044)
O3': (-28.014,96.565,100.566)
OP1: (-29.479,97.098,92.974)
OP2: (-30.776,96.711,90.810)
C3': (-25.801,97.182,93.611)
C1': (-24.716,95.229,93.017)
C5': (-27.105,97.012,91.434)
O6: (-20.959,91.597,90.218)
O4': (-26.010,95.118,92.449)
C8: (-23.197,95.077,91.074)
C2: (-22.986,91.223,93.159)
C6: (-21.770,91.872,91.117)
C5: (-22.448,93.097,91.279)
C4: (-23.306,93.260,92.336)
P: (-29.625,96.382,91.692)
C4': (-26.737,96.353,92.730)
C2': (-24.458,96.723,93.112)
O2': (-23.377,97.028,93.954)
N1: (-22.111,90.966,92.126)
N2: (-23.178,90.233,94.046)
N3: (-23.627,92.376,93.311)
N7: (-22.390,94.241,90.504)
N9: (-23.780,94.533,92.171)
O5': (-28.277,96.457,90.866)
O3': (-25.953,96.788,94.984)
Image (generated by PyMOL):
PyMOL image
show in jmol